메뉴 건너뛰기




Volumn 73, Issue , 2014, Pages 16-25

Bigger is not always better: Transmission and fitness burden of ~1MB Pseudomonas syringae megaplasmid pMPPla107

Author keywords

Fitness cost; HGT; Megaplasmid; Plasmid transfer; Pseudomonas

Indexed keywords

AGAR MEDIUM; ARTICLE; BACTERIAL GENETICS; BACTERIAL STRAIN; CHROMOSOME; CONTROLLED STUDY; EVOLUTION; HORIZONTAL GENE TRANSFER; IN VITRO STUDY; LIQUID CULTURE; MEGAPLASMID; MUTATION; NONHUMAN; PLASMID; PSEUDOMONAS SYRINGAE; SINORHIZOBIUM; TYPE IV SECRETION SYSTEM; BACTERIUM CONJUGATION; CLASSIFICATION; GENETICS; MICROBIOLOGY; PATHOGENICITY; PLANT DISEASE; PSEUDOMONAS; PSEUDOMONAS INFECTION; TRANSMISSION; VIRULENCE;

EID: 84901231977     PISSN: 0147619X     EISSN: 10959890     Source Type: Journal    
DOI: 10.1016/j.plasmid.2014.04.002     Document Type: Article
Times cited : (28)

References (50)
  • 2
    • 37749018860 scopus 로고    scopus 로고
    • Natural transformation increases the rate of adaptation in the human pathogen Helicobacter pylori
    • Baltrus D.A., Guillemin K., Phillips P.C. Natural transformation increases the rate of adaptation in the human pathogen Helicobacter pylori. Evolution 2008, 62:39-49. 10.1111/j.1558-5646.2007.00271.x.
    • (2008) Evolution , vol.62 , pp. 39-49
    • Baltrus, D.A.1    Guillemin, K.2    Phillips, P.C.3
  • 5
    • 84880468631 scopus 로고    scopus 로고
    • Mobile genetic elements of the human gastrointestinal tract: potential for spread of antibiotic resistance genes
    • Broaders E., Gahan C.G.M., Marchesi J.R. Mobile genetic elements of the human gastrointestinal tract: potential for spread of antibiotic resistance genes. Gut Microbes 2013, 4:271-280. 10.4161/gmic.24627.
    • (2013) Gut Microbes , vol.4 , pp. 271-280
    • Broaders, E.1    Gahan, C.G.M.2    Marchesi, J.R.3
  • 6
    • 33749531431 scopus 로고    scopus 로고
    • Mini-Tn7 insertion in bacteria with single attTn7 sites: example Pseudomonas aeruginosa
    • Choi K.-H., Schweizer H.P. Mini-Tn7 insertion in bacteria with single attTn7 sites: example Pseudomonas aeruginosa. Nat. Protoc. 2006, 1:153-161. 10.1038/nprot.2006.24.
    • (2006) Nat. Protoc. , vol.1 , pp. 153-161
    • Choi, K.-H.1    Schweizer, H.P.2
  • 7
  • 8
    • 0022595516 scopus 로고
    • Generation and Characterization of Tn5 Insertion Mutations in Pseudomonas syringae pv. tomato
    • Cuppels D.A. Generation and Characterization of Tn5 Insertion Mutations in Pseudomonas syringae pv. tomato. Appl. Environ. Microbiol. 1986, 51:323-327.
    • (1986) Appl. Environ. Microbiol. , vol.51 , pp. 323-327
    • Cuppels, D.A.1
  • 9
    • 66149185556 scopus 로고    scopus 로고
    • Compensatory mutations are repeatable and clustered within proteins
    • Davis B.H., Poon A.F.Y., Whitlock M.C. Compensatory mutations are repeatable and clustered within proteins. Proc. Biol. Sci. 2009, 276:1823-1827. 10.1098/rspb.2008.1846.
    • (2009) Proc. Biol. Sci. , vol.276 , pp. 1823-1827
    • Davis, B.H.1    Poon, A.F.Y.2    Whitlock, M.C.3
  • 10
    • 33847231339 scopus 로고    scopus 로고
    • Stability of a promiscuous plasmid in different hosts: no guarantee for a long-term relationship
    • De Gelder L., Ponciano J.M., Joyce P., Top E.M. Stability of a promiscuous plasmid in different hosts: no guarantee for a long-term relationship. Microbiology (Reading, Engl.) 2007, 153:452-463. 10.1099/mic.0.2006/001784-0.
    • (2007) Microbiology (Reading, Engl.) , vol.153 , pp. 452-463
    • De Gelder, L.1    Ponciano, J.M.2    Joyce, P.3    Top, E.M.4
  • 11
    • 45849099491 scopus 로고    scopus 로고
    • Adaptive plasmid evolution results in host-range expansion of a broad-host-range plasmid
    • De Gelder L., Williams J.J., Ponciano J.M., Sota M., Top E.M. Adaptive plasmid evolution results in host-range expansion of a broad-host-range plasmid. Genetics 2008, 178:2179-2190. 10.1534/genetics.107.084475.
    • (2008) Genetics , vol.178 , pp. 2179-2190
    • De Gelder, L.1    Williams, J.J.2    Ponciano, J.M.3    Sota, M.4    Top, E.M.5
  • 12
    • 0033917198 scopus 로고    scopus 로고
    • Plasmid effects on Escherichia coli metabolism
    • Diaz Ricci J.C., Hernández M.E. Plasmid effects on Escherichia coli metabolism. Crit. Rev. Biotechnol. 2000, 20:79-108. 10.1080/07388550008984167.
    • (2000) Crit. Rev. Biotechnol. , vol.20 , pp. 79-108
    • Diaz Ricci, J.C.1    Hernández, M.E.2
  • 13
    • 23944499633 scopus 로고    scopus 로고
    • Horizontal gene transfer, genome innovation and evolution
    • Gogarten J.P., Townsend J.P. Horizontal gene transfer, genome innovation and evolution. Nat. Rev. Microbiol. 2005, 3:679-687. 10.1038/nrmicro1204.
    • (2005) Nat. Rev. Microbiol. , vol.3 , pp. 679-687
    • Gogarten, J.P.1    Townsend, J.P.2
  • 14
    • 84892660249 scopus 로고    scopus 로고
    • Resource competition may lead to effective treatment of antibiotic resistant infections
    • Gomes A.L.C., Galagan J.E., Segrè D. Resource competition may lead to effective treatment of antibiotic resistant infections. PLoS ONE 2013, 8:e80775. 10.1371/journal.pone.0080775.
    • (2013) PLoS ONE , vol.8
    • Gomes, A.L.C.1    Galagan, J.E.2    Segrè, D.3
  • 15
    • 84555206561 scopus 로고    scopus 로고
    • Secular trends in Helicobacter pylori seroprevalence in adults in the United States: evidence for sustained race/ethnic disparities
    • Grad Y.H., Lipsitch M., Aiello A.E. Secular trends in Helicobacter pylori seroprevalence in adults in the United States: evidence for sustained race/ethnic disparities. Am. J. Epidemiol. 2012, 175:54-59. 10.1093/aje/kwr288.
    • (2012) Am. J. Epidemiol. , vol.175 , pp. 54-59
    • Grad, Y.H.1    Lipsitch, M.2    Aiello, A.E.3
  • 16
    • 77950217695 scopus 로고    scopus 로고
    • Pathogenicity islands PAPI-1 and PAPI-2 contribute individually and synergistically to the virulence of Pseudomonas aeruginosa strain PA14
    • Harrison E.M., Carter M.E.K., Luck S., Ou H.-Y., He X., Deng Z., O'Callaghan C., Kadioglu A., Rajakumar K. Pathogenicity islands PAPI-1 and PAPI-2 contribute individually and synergistically to the virulence of Pseudomonas aeruginosa strain PA14. Infect. Immun. 2010, 78:1437-1446. 10.1128/IAI.00621-09.
    • (2010) Infect. Immun. , vol.78 , pp. 1437-1446
    • Harrison, E.M.1    Carter, M.E.K.2    Luck, S.3    Ou, H.-Y.4    He, X.5    Deng, Z.6    O'Callaghan, C.7    Kadioglu, A.8    Rajakumar, K.9
  • 17
    • 84861666352 scopus 로고    scopus 로고
    • Plasmid-mediated horizontal gene transfer is a coevolutionary process
    • Harrison E., Brockhurst M.A. Plasmid-mediated horizontal gene transfer is a coevolutionary process. Trends Microbiol. 2012, 20:262-267. 10.1016/j.tim.2012.04.003.
    • (2012) Trends Microbiol. , vol.20 , pp. 262-267
    • Harrison, E.1    Brockhurst, M.A.2
  • 18
    • 0346936145 scopus 로고    scopus 로고
    • Proteome reference map of Pseudomonas putida strain KT2440 for genome expression profiling: distinct responses of KT2440 and Pseudomonas aeruginosa strain PAO1 to iron deprivation and a new form of superoxide dismutase
    • Heim S., Ferrer M., Heuer H., Regenhardt D., Nimtz M., Timmis K.N. Proteome reference map of Pseudomonas putida strain KT2440 for genome expression profiling: distinct responses of KT2440 and Pseudomonas aeruginosa strain PAO1 to iron deprivation and a new form of superoxide dismutase. Environ. Microbiol. 2003, 5:1257-1269.
    • (2003) Environ. Microbiol. , vol.5 , pp. 1257-1269
    • Heim, S.1    Ferrer, M.2    Heuer, H.3    Regenhardt, D.4    Nimtz, M.5    Timmis, K.N.6
  • 19
    • 33847234930 scopus 로고    scopus 로고
    • Frequent conjugative transfer accelerates adaptation of a broad-host-range plasmid to an unfavorable Pseudomonas putida host
    • Heuer H., Fox R.E., Top E.M. Frequent conjugative transfer accelerates adaptation of a broad-host-range plasmid to an unfavorable Pseudomonas putida host. FEMS Microbiol. Ecol. 2007, 59:738-748. 10.1111/j.1574-6941.2006.00223.x.
    • (2007) FEMS Microbiol. Ecol. , vol.59 , pp. 738-748
    • Heuer, H.1    Fox, R.E.2    Top, E.M.3
  • 20
    • 84863653627 scopus 로고    scopus 로고
    • Identification of genes that promote or antagonize somatic homolog pairing using a high-throughput FISH-based screen
    • Joyce E.F., Williams B.R., Xie T., Wu C.-T. Identification of genes that promote or antagonize somatic homolog pairing using a high-throughput FISH-based screen. PLoS Genet. 2012, 8:e1002667. 10.1371/journal.pgen.1002667.
    • (2012) PLoS Genet. , vol.8
    • Joyce, E.F.1    Williams, B.R.2    Xie, T.3    Wu, C.-T.4
  • 21
    • 33646559207 scopus 로고    scopus 로고
    • On the formation of novel genes by duplication in the Caenorhabditis elegans genome
    • Katju V., Lynch M. On the formation of novel genes by duplication in the Caenorhabditis elegans genome. Mol. Biol. Evol. 2006, 23:1056-1067. 10.1093/molbev/msj114.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 1056-1067
    • Katju, V.1    Lynch, M.2
  • 22
    • 84874855549 scopus 로고    scopus 로고
    • Toxin-antitoxin systems on the large defense plasmid pSYSA of Synechocystis sp. PCC 6803
    • Kopfmann S., Hess W.R. Toxin-antitoxin systems on the large defense plasmid pSYSA of Synechocystis sp. PCC 6803. J. Biol. Chem. 2013, 288:7399-7409. 10.1074/jbc.M112.434100.
    • (2013) J. Biol. Chem. , vol.288 , pp. 7399-7409
    • Kopfmann, S.1    Hess, W.R.2
  • 23
    • 17444428920 scopus 로고    scopus 로고
    • Highly efficient protein expression and purification using bacterial hemoglobin fusion vector
    • Kwon S.-Y., Choi Y.-J., Kang T.-H., Lee K.-H., Cha S.-S., Kim G.-H., Lee H.-S., Kim K.-T., Kim K.-J. Highly efficient protein expression and purification using bacterial hemoglobin fusion vector. Plasmid 2005, 53:274-282. 10.1016/j.plasmid.2004.11.006.
    • (2005) Plasmid , vol.53 , pp. 274-282
    • Kwon, S.-Y.1    Choi, Y.-J.2    Kang, T.-H.3    Lee, K.-H.4    Cha, S.-S.5    Kim, G.-H.6    Lee, H.-S.7    Kim, K.-T.8    Kim, K.-J.9
  • 24
    • 3042786311 scopus 로고    scopus 로고
    • Mini-Tn7 transposons for site-specific tagging of bacteria with fluorescent proteins
    • Lambertsen L., Sternberg C., Molin S. Mini-Tn7 transposons for site-specific tagging of bacteria with fluorescent proteins. Environ. Microbiol. 2004, 6:726-732. 10.1111/j.1462-2920.2004.00605.x.
    • (2004) Environ. Microbiol. , vol.6 , pp. 726-732
    • Lambertsen, L.1    Sternberg, C.2    Molin, S.3
  • 25
    • 84887627292 scopus 로고    scopus 로고
    • New quantitative methods for measuring plasmid loss rates reveal unexpected stability
    • Lau B.T.C., Malkus P., Paulsson J. New quantitative methods for measuring plasmid loss rates reveal unexpected stability. Plasmid 2013, 70:353-361. 10.1016/j.plasmid.2013.07.007.
    • (2013) Plasmid , vol.70 , pp. 353-361
    • Lau, B.T.C.1    Malkus, P.2    Paulsson, J.3
  • 26
    • 0032482924 scopus 로고    scopus 로고
    • Molecular archaeology of the Escherichia coli genome
    • Lawrence J.G., Ochman H. Molecular archaeology of the Escherichia coli genome. Proc. Natl. Acad. Sci. U.S.A. 1998, 95:9413-9417.
    • (1998) Proc. Natl. Acad. Sci. U.S.A. , vol.95 , pp. 9413-9417
    • Lawrence, J.G.1    Ochman, H.2
  • 27
    • 0029847554 scopus 로고    scopus 로고
    • Selfish operons: horizontal transfer may drive the evolution of gene clusters
    • Lawrence J.G., Roth J.R. Selfish operons: horizontal transfer may drive the evolution of gene clusters. Genetics 1996, 143:1843-1860.
    • (1996) Genetics , vol.143 , pp. 1843-1860
    • Lawrence, J.G.1    Roth, J.R.2
  • 28
    • 70149105095 scopus 로고    scopus 로고
    • The population and evolutionary dynamics of homologous gene recombination in bacterial populations
    • Levin B.R., Cornejo O.E. The population and evolutionary dynamics of homologous gene recombination in bacterial populations. PLoS Genet. 2009, 5:e1000601. 10.1371/journal.pgen.1000601.
    • (2009) PLoS Genet. , vol.5
    • Levin, B.R.1    Cornejo, O.E.2
  • 29
    • 84888431413 scopus 로고    scopus 로고
    • Toxin-antitoxin-stabilized reporter plasmids for biophotonic imaging of Group A streptococcus
    • Loh J.M.S., Proft T. Toxin-antitoxin-stabilized reporter plasmids for biophotonic imaging of Group A streptococcus. Appl. Microbiol. Biotechnol. 2013, 97:9737-9745. 10.1007/s00253-013-5200-7.
    • (2013) Appl. Microbiol. Biotechnol. , vol.97 , pp. 9737-9745
    • Loh, J.M.S.1    Proft, T.2
  • 31
    • 84864112797 scopus 로고    scopus 로고
    • High expression hampers horizontal gene transfer
    • Park C., Zhang J. High expression hampers horizontal gene transfer. Genome Biol. Evol. 2012, 4:523-532. 10.1093/gbe/evs030.
    • (2012) Genome Biol. Evol. , vol.4 , pp. 523-532
    • Park, C.1    Zhang, J.2
  • 32
    • 3242890266 scopus 로고    scopus 로고
    • Microbiology. Researchers trade insights about gene swapping
    • Pennisi E. Microbiology. Researchers trade insights about gene swapping. Science 2004, 305:334-335. 10.1126/science.305.5682.334.
    • (2004) Science , vol.305 , pp. 334-335
    • Pennisi, E.1
  • 33
    • 84858773498 scopus 로고    scopus 로고
    • A cooperative virulence plasmid imposes a high fitness cost under conditions that induce pathogenesis
    • Platt T.G., Bever J.D., Fuqua C. A cooperative virulence plasmid imposes a high fitness cost under conditions that induce pathogenesis. Proc. Biol. Sci. 2012, 279:1691-1699. 10.1098/rspb.2011.2002.
    • (2012) Proc. Biol. Sci. , vol.279 , pp. 1691-1699
    • Platt, T.G.1    Bever, J.D.2    Fuqua, C.3
  • 34
    • 33847188754 scopus 로고    scopus 로고
    • The population biology of bacterial plasmids: a hidden Markov model approach
    • Ponciano J.M., De Gelder L., Top E.M., Joyce P. The population biology of bacterial plasmids: a hidden Markov model approach. Genetics 2007, 176:957-968. 10.1534/genetics.106.061937.
    • (2007) Genetics , vol.176 , pp. 957-968
    • Ponciano, J.M.1    De Gelder, L.2    Top, E.M.3    Joyce, P.4
  • 36
  • 37
    • 84894324351 scopus 로고    scopus 로고
    • Positive epistasis between co-infecting plasmids promotes plasmid survival in bacterial populations
    • San Millan A., Heilbron K., MacLean R.C. Positive epistasis between co-infecting plasmids promotes plasmid survival in bacterial populations. ISME J. 2014, 8:601-612. 10.1038/ismej.2013.182.
    • (2014) ISME J. , vol.8 , pp. 601-612
    • San Millan, A.1    Heilbron, K.2    MacLean, R.C.3
  • 38
    • 77953115788 scopus 로고    scopus 로고
    • Cost of unneeded proteins in E. coli is reduced after several generations in exponential growth
    • Shachrai I., Zaslaver A., Alon U., Dekel E. Cost of unneeded proteins in E. coli is reduced after several generations in exponential growth. Mol. Cell 2010, 38:758-767. 10.1016/j.molcel.2010.04.015.
    • (2010) Mol. Cell , vol.38 , pp. 758-767
    • Shachrai, I.1    Zaslaver, A.2    Alon, U.3    Dekel, E.4
  • 40
    • 0031888392 scopus 로고    scopus 로고
    • Natural genetic transformation of Pseudomonas stutzeri in a non-sterile soil
    • Sikorski J., Graupner S., Lorenz M.G., Wackernagel W. Natural genetic transformation of Pseudomonas stutzeri in a non-sterile soil. Microbiology (Reading, Engl.) 1998, 144(Pt 2):569-576.
    • (1998) Microbiology (Reading, Engl.) , vol.144 , Issue.PART 2 , pp. 569-576
    • Sikorski, J.1    Graupner, S.2    Lorenz, M.G.3    Wackernagel, W.4
  • 41
    • 0344563518 scopus 로고    scopus 로고
    • Analysis of genotypic diversity and relationships among Pseudomonas stutzeri strains by PCR-based genomic fingerprinting and multilocus enzyme electrophoresis
    • Sikorski J., Rosselló-Mora R., Lorenz M.G. Analysis of genotypic diversity and relationships among Pseudomonas stutzeri strains by PCR-based genomic fingerprinting and multilocus enzyme electrophoresis. Syst. Appl. Microbiol. 1999, 22:393-402. 10.1016/S0723-2020(99)80048-4.
    • (1999) Syst. Appl. Microbiol. , vol.22 , pp. 393-402
    • Sikorski, J.1    Rosselló-Mora, R.2    Lorenz, M.G.3
  • 43
    • 32044445998 scopus 로고    scopus 로고
    • Community composition of a hypersaline endoevaporitic microbial mat
    • Sørensen K.B., Canfield D.E., Teske A.P., Oren A. Community composition of a hypersaline endoevaporitic microbial mat. Appl. Environ. Microbiol. 2005, 71:7352-7365. 10.1128/AEM.71.11.7352-7365.2005.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 7352-7365
    • Sørensen, K.B.1    Canfield, D.E.2    Teske, A.P.3    Oren, A.4
  • 44
    • 34247847841 scopus 로고    scopus 로고
    • Region-specific insertion of transposons in combination with selection for high plasmid transferability and stability accounts for the structural similarity of IncP-1 plasmids
    • Sota M., Tsuda M., Yano H., Suzuki H., Forney L.J., Top E.M. Region-specific insertion of transposons in combination with selection for high plasmid transferability and stability accounts for the structural similarity of IncP-1 plasmids. J. Bacteriol. 2007, 189:3091-3098. 10.1128/JB.01906-06.
    • (2007) J. Bacteriol. , vol.189 , pp. 3091-3098
    • Sota, M.1    Tsuda, M.2    Yano, H.3    Suzuki, H.4    Forney, L.J.5    Top, E.M.6
  • 46
    • 77953085203 scopus 로고    scopus 로고
    • Waste and yet want not
    • Stoebel D.M., Dykhuizen D.E. Waste and yet want not. Mol. Cell 2010, 38:625-626. 10.1016/j.molcel.2010.05.028.
    • (2010) Mol. Cell , vol.38 , pp. 625-626
    • Stoebel, D.M.1    Dykhuizen, D.E.2
  • 47
    • 84892872968 scopus 로고    scopus 로고
    • Toxin-antitoxin systems: biology, identification, and application
    • Unterholzner S.J., Poppenberger B., Rozhon W. Toxin-antitoxin systems: biology, identification, and application. Mob. Genet. Elements 2013, 3:e26219. 10.4161/mge.26219.
    • (2013) Mob. Genet. Elements , vol.3
    • Unterholzner, S.J.1    Poppenberger, B.2    Rozhon, W.3
  • 48
    • 0032488861 scopus 로고    scopus 로고
    • Conjugative transfer by the virulence system of Legionella pneumophila
    • Vogel J.P., Andrews H.L., Wong S.K., Isberg R.R. Conjugative transfer by the virulence system of Legionella pneumophila. Science 1998, 279:873-876. 10.1126/science.279.5352.873.
    • (1998) Science , vol.279 , pp. 873-876
    • Vogel, J.P.1    Andrews, H.L.2    Wong, S.K.3    Isberg, R.R.4
  • 49
    • 84872126507 scopus 로고    scopus 로고
    • Horizontal transfer of antibiotic resistance genes on abiotic touch surfaces: implications for public health
    • Warnes S.L., Highmore C.J., Keevil C.W. Horizontal transfer of antibiotic resistance genes on abiotic touch surfaces: implications for public health. MBio 2012, 3. 10.1128/mBio. 00489-12.
    • (2012) MBio , vol.3
    • Warnes, S.L.1    Highmore, C.J.2    Keevil, C.W.3
  • 50
    • 84870950237 scopus 로고    scopus 로고
    • Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer
    • Wolf Y.I., Makarova K.S., Yutin N., Koonin E.V. Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer. Biol. Direct 2012, 7:46. 10.1186/1745-6150-7-46.
    • (2012) Biol. Direct , vol.7 , pp. 46
    • Wolf, Y.I.1    Makarova, K.S.2    Yutin, N.3    Koonin, E.V.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.