메뉴 건너뛰기




Volumn 70, Issue , 2014, Pages 329-370

Genomics, lifestyles and future prospects of wood-decay and litter-decomposing basidiomycota

Author keywords

Basidiomycota; Fungal enzymes; Fungal genomics; Lignocellulose; Litter decomposing fungi; Soil organic matter; Wood decay fungi

Indexed keywords


EID: 84900854547     PISSN: 00652296     EISSN: None     Source Type: Book Series    
DOI: 10.1016/B978-0-12-397940-7.00011-2     Document Type: Chapter
Times cited : (128)

References (110)
  • 1
    • 33748458674 scopus 로고    scopus 로고
    • Microbial colonization of beech and spruce litter-Influence of decomposition site and plant litter species on the diversity of microbial community
    • Aneja M.K., Sharma S., Fleischmann F., Stich S., Heller W., Bahnweg G., et al. Microbial colonization of beech and spruce litter-Influence of decomposition site and plant litter species on the diversity of microbial community. Microbial Ecology 2006, 52:127-135.
    • (2006) Microbial Ecology , vol.52 , pp. 127-135
    • Aneja, M.K.1    Sharma, S.2    Fleischmann, F.3    Stich, S.4    Heller, W.5    Bahnweg, G.6
  • 2
    • 33645027271 scopus 로고    scopus 로고
    • Fungal laccases-Occurrence and properties
    • Baldrian P. Fungal laccases-Occurrence and properties. FEMS Microbiology Reviews 2006, 30:215-242.
    • (2006) FEMS Microbiology Reviews , vol.30 , pp. 215-242
    • Baldrian, P.1
  • 3
    • 42149110897 scopus 로고    scopus 로고
    • Degradation of cellulose by basidiomycetous fungi
    • Baldrian P., Valaskova V. Degradation of cellulose by basidiomycetous fungi. FEMS Microbiology Reviews 2008, 32:501-521.
    • (2008) FEMS Microbiology Reviews , vol.32 , pp. 501-521
    • Baldrian, P.1    Valaskova, V.2
  • 4
    • 0001151919 scopus 로고
    • The penetration and growth of blue-stain fungi in the sapwood of lodgepole pine attacked by mountain pine beetle
    • Ballard R.G., Walsh M.A., Cole W.E. The penetration and growth of blue-stain fungi in the sapwood of lodgepole pine attacked by mountain pine beetle. Canadian Journal of Botany 1984, 62:1724-1729.
    • (1984) Canadian Journal of Botany , vol.62 , pp. 1724-1729
    • Ballard, R.G.1    Walsh, M.A.2    Cole, W.E.3
  • 5
    • 84875089093 scopus 로고    scopus 로고
    • Sequencing and comparative analysis of the straw mushroom (Volvariella volvacea) genome
    • Bao D., Gong M., Zheng H., Chen M., Zhang L., Wang H., et al. Sequencing and comparative analysis of the straw mushroom (Volvariella volvacea) genome. PLoS One 2013, 8(3):e58294.
    • (2013) PLoS One , vol.8 , Issue.3
    • Bao, D.1    Gong, M.2    Zheng, H.3    Chen, M.4    Zhang, L.5    Wang, H.6
  • 7
    • 0029031691 scopus 로고
    • PCR-mediated analysis of lignocellulolytic gene transcription by Phanerochaete chrysosporium: Substrate-dependent differential expression within gene-families
    • Broda P., Birch P.R.J., Brooks P.R., Sims P.F.G. PCR-mediated analysis of lignocellulolytic gene transcription by Phanerochaete chrysosporium: Substrate-dependent differential expression within gene-families. Applied and Environmental Microbiology 1995, 61:2358-2364.
    • (1995) Applied and Environmental Microbiology , vol.61 , pp. 2358-2364
    • Broda, P.1    Birch, P.R.J.2    Brooks, P.R.3    Sims, P.F.G.4
  • 8
    • 84874825014 scopus 로고    scopus 로고
    • Composition and expression of genes encoding carbohydrate-active enzymes in the straw-degrading mushroom Volvariella volvacea
    • Chen B., Gui F., Xie B., Deng Y., Sun X., Lin M., et al. Composition and expression of genes encoding carbohydrate-active enzymes in the straw-degrading mushroom Volvariella volvacea. PLoS One 2013, 8(3):e58780.
    • (2013) PLoS One , vol.8 , Issue.3
    • Chen, B.1    Gui, F.2    Xie, B.3    Deng, Y.4    Sun, X.5    Lin, M.6
  • 9
    • 0033605084 scopus 로고    scopus 로고
    • The crystal structure of lignin peroxidase at 1.70Å resolution reveals a hydroxy group on the Cβ of tryptophan 171: A novel radical site formed during the redox cycle
    • Choinowski T., Blodig W., Winterhalter K.H., Piontek K. The crystal structure of lignin peroxidase at 1.70Å resolution reveals a hydroxy group on the Cβ of tryptophan 171: A novel radical site formed during the redox cycle. Journal of Molecular Biology 1999, 286:809-827.
    • (1999) Journal of Molecular Biology , vol.286 , pp. 809-827
    • Choinowski, T.1    Blodig, W.2    Winterhalter, K.H.3    Piontek, K.4
  • 10
    • 84903792743 scopus 로고    scopus 로고
    • Leaf-associated fungal diversity in acidified streams: Insights from combining traditional and molecular approaches
    • Clivot H., Cornut J., Chauvet E., Elger A., Poupin P., Guerold F., et al. Leaf-associated fungal diversity in acidified streams: Insights from combining traditional and molecular approaches. Environmental Microbiology 2013, 10.1111/1462-2920.12245.
    • (2013) Environmental Microbiology
    • Clivot, H.1    Cornut, J.2    Chauvet, E.3    Elger, A.4    Poupin, P.5    Guerold, F.6
  • 11
    • 0035199524 scopus 로고    scopus 로고
    • Aspergillus enzymes involved in degradation of plant cell wall polysaccharides
    • de Vries R.P., Visser J. Aspergillus enzymes involved in degradation of plant cell wall polysaccharides. Microbiology and Molecular Biology Reviews 2001, 65:497-522.
    • (2001) Microbiology and Molecular Biology Reviews , vol.65 , pp. 497-522
    • de Vries, R.P.1    Visser, J.2
  • 13
    • 79961228770 scopus 로고    scopus 로고
    • The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi
    • Eastwood D.C., Floudas D., Binder M., Majcherczyk A., Schneider P., Aerts A., et al. The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi. Science 2011, 333:762-765.
    • (2011) Science , vol.333 , pp. 762-765
    • Eastwood, D.C.1    Floudas, D.2    Binder, M.3    Majcherczyk, A.4    Schneider, P.5    Aerts, A.6
  • 16
    • 0005149955 scopus 로고    scopus 로고
    • Food and Agriculture Organisation of the United Nations, Rome, Available at: FAO
    • FAO Global Forest Resources Assesment 2010. Main report: FAO Forestry Paper 163 2010, Food and Agriculture Organisation of the United Nations, Rome, Available at:. http://www.fao.org/forestry/fra/fra2010/en/.
    • (2010) Global Forest Resources Assesment 2010. Main report: FAO Forestry Paper 163
  • 19
    • 84862977387 scopus 로고    scopus 로고
    • The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
    • Floudas D., Binder M., Riley R., Barry K., Blanchette R.A., Henrissat B., et al. The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science 2012, 336:1715-1719.
    • (2012) Science , vol.336 , pp. 1715-1719
    • Floudas, D.1    Binder, M.2    Riley, R.3    Barry, K.4    Blanchette, R.A.5    Henrissat, B.6
  • 21
    • 0028291491 scopus 로고
    • Anisaldehyde production and aryl-alcohol oxidase and dehydrogenase-activities in ligninolytic fungi of the genus Pleurotus
    • Gutíerrez A., Caramelo S., Prieto A., Martínez M.J., Martínez A.T. Anisaldehyde production and aryl-alcohol oxidase and dehydrogenase-activities in ligninolytic fungi of the genus Pleurotus. Applied and Environmental Microbiology 1994, 60:1783-1788.
    • (1994) Applied and Environmental Microbiology , vol.60 , pp. 1783-1788
    • Gutíerrez, A.1    Caramelo, S.2    Prieto, A.3    Martínez, M.J.4    Martínez, A.T.5
  • 22
    • 43849099090 scopus 로고    scopus 로고
    • Role of fungal peroxidases in biological ligninolysis
    • Hammel K.E., Cullen D. Role of fungal peroxidases in biological ligninolysis. Current Opinion in Plant Biology 2008, 11:349-355.
    • (2008) Current Opinion in Plant Biology , vol.11 , pp. 349-355
    • Hammel, K.E.1    Cullen, D.2
  • 23
    • 84878370770 scopus 로고    scopus 로고
    • The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia clavigera
    • Haridas S., Wang Y., Lim L., Massoumi Alamouti S., Jackman S., Docking R., et al. The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia clavigera. BMC Genomics 2013, 14:373. 10.1186/1471-2164-14-373.
    • (2013) BMC Genomics , vol.14 , pp. 373
    • Haridas, S.1    Wang, Y.2    Lim, L.3    Massoumi Alamouti, S.4    Jackman, S.5    Docking, R.6
  • 26
    • 33646268426 scopus 로고    scopus 로고
    • Phylogenetic comparison and classification of laccase and related multicopper oxidase protein sequences
    • Hoegger P.J., Kilaru S., James T.Y., Thacker J.R., Kües U. Phylogenetic comparison and classification of laccase and related multicopper oxidase protein sequences. FEBS Journal 2006, 273:2308-2326.
    • (2006) FEBS Journal , vol.273 , pp. 2308-2326
    • Hoegger, P.J.1    Kilaru, S.2    James, T.Y.3    Thacker, J.R.4    Kües, U.5
  • 27
    • 0037117763 scopus 로고    scopus 로고
    • Review: Lignin conversion by manganese peroxidase (MnP)
    • Hofrichter M. Review: Lignin conversion by manganese peroxidase (MnP). Enzyme and Microbial Technology 2002, 30:454-466.
    • (2002) Enzyme and Microbial Technology , vol.30 , pp. 454-466
    • Hofrichter, M.1
  • 30
    • 84892379836 scopus 로고    scopus 로고
    • Genomewide analysis of polysaccharides degrading enzymes in 11 white- and brown-rot Polyporales provides insight into mechanisms of wood decay
    • Hori C., Gaskell J., Igarashi K., Samejima M., Hibbett D., Henrissat B., et al. Genomewide analysis of polysaccharides degrading enzymes in 11 white- and brown-rot Polyporales provides insight into mechanisms of wood decay. Mycologia 2013, 105:1412-1427.
    • (2013) Mycologia , vol.105 , pp. 1412-1427
    • Hori, C.1    Gaskell, J.2    Igarashi, K.3    Samejima, M.4    Hibbett, D.5    Henrissat, B.6
  • 31
    • 79959976450 scopus 로고    scopus 로고
    • Effects of xylan and starch on secretome of the basidiomycete Phanerochaete chrysosporium grown on cellulose
    • Hori C., Igarashi K., Katayama A., Samejima M. Effects of xylan and starch on secretome of the basidiomycete Phanerochaete chrysosporium grown on cellulose. FEMS Microbiology Letters 2011, 321:14-23.
    • (2011) FEMS Microbiology Letters , vol.321 , pp. 14-23
    • Hori, C.1    Igarashi, K.2    Katayama, A.3    Samejima, M.4
  • 32
    • 84906288734 scopus 로고    scopus 로고
    • Carbon cycling and formation of soil organic matter
    • Academic Press, Oxford, E.A. Paul (Ed.)
    • Horwarth W. Carbon cycling and formation of soil organic matter. Soil microbiology, ecology, and biochemistry 2007, 303-339. Academic Press, Oxford. 3rd ed. E.A. Paul (Ed.).
    • (2007) Soil microbiology, ecology, and biochemistry , pp. 303-339
    • Horwarth, W.1
  • 33
    • 79958212842 scopus 로고    scopus 로고
    • Penicillium araracuarense sp. nov., Penicillium elleniae sp. nov., Penicillium penarojense sp. nov., Penicillium vanderhammenii sp. nov. and Penicillium wotroi sp. nov., isolated from leaf litter
    • Houbraken J., Lopez-Quintero C.A., Frisvad J.C., Boekhout T., Theelen B., Franco-Molano A.E., et al. Penicillium araracuarense sp. nov., Penicillium elleniae sp. nov., Penicillium penarojense sp. nov., Penicillium vanderhammenii sp. nov. and Penicillium wotroi sp. nov., isolated from leaf litter. International Journal of Systematic and Evolutionary Microbiology 2011, 61:1462-1475.
    • (2011) International Journal of Systematic and Evolutionary Microbiology , vol.61 , pp. 1462-1475
    • Houbraken, J.1    Lopez-Quintero, C.A.2    Frisvad, J.C.3    Boekhout, T.4    Theelen, B.5    Franco-Molano, A.E.6
  • 34
    • 77953121000 scopus 로고    scopus 로고
    • Peroxidase mediated decolorization and remediation of wastewater containing industrial dyes: A review
    • Husain Q. Peroxidase mediated decolorization and remediation of wastewater containing industrial dyes: A review. Reviews in Environmental Science and Biotechnology 2010, 9:117-140.
    • (2010) Reviews in Environmental Science and Biotechnology , vol.9 , pp. 117-140
    • Husain, Q.1
  • 35
    • 52649091899 scopus 로고    scopus 로고
    • Characterization of an endoglucanase belonging to a new subfamily of glycoside hydrolase family 45 of the basidiomycete Phanerochaete chrysosporium
    • Igarashi K., Ishida T., Hori C., Samejima M. Characterization of an endoglucanase belonging to a new subfamily of glycoside hydrolase family 45 of the basidiomycete Phanerochaete chrysosporium. Applied and Environmental Microbiology 2008, 74:5628-5634.
    • (2008) Applied and Environmental Microbiology , vol.74 , pp. 5628-5634
    • Igarashi, K.1    Ishida, T.2    Hori, C.3    Samejima, M.4
  • 36
    • 0035379763 scopus 로고    scopus 로고
    • Pathways for extracellular Fenton chemistry in the brown rot basidiomycete Gloeophyllum trabeum
    • Jensen K.A.J., Houtman C.J., Ryan Z.C., Hammel K.E. Pathways for extracellular Fenton chemistry in the brown rot basidiomycete Gloeophyllum trabeum. Applied and Environmental Microbiology 2001, 67:2705-2711.
    • (2001) Applied and Environmental Microbiology , vol.67 , pp. 2705-2711
    • Jensen, K.A.J.1    Houtman, C.J.2    Ryan, Z.C.3    Hammel, K.E.4
  • 38
    • 70350590693 scopus 로고    scopus 로고
    • The genes encoding glycoside hydrolase family 6 and 7 cellulases from the brown-rot fungus Coniophora puteana
    • Kajisa T., Igarashi K., Samejima M. The genes encoding glycoside hydrolase family 6 and 7 cellulases from the brown-rot fungus Coniophora puteana. Journal of Wood Science 2009, 55:376-380.
    • (2009) Journal of Wood Science , vol.55 , pp. 376-380
    • Kajisa, T.1    Igarashi, K.2    Samejima, M.3
  • 39
    • 71249161490 scopus 로고    scopus 로고
    • Oxidizability of unsaturated fatty acids and of a non-phenolic lignin structure in the manganese peroxidase-dependent lipid peroxidation system
    • Kapich A.N., Korneichik T.V., Hatakka A., Hammel K.E. Oxidizability of unsaturated fatty acids and of a non-phenolic lignin structure in the manganese peroxidase-dependent lipid peroxidation system. Enzyme and Microbial Technology 2010, 46:136-140.
    • (2010) Enzyme and Microbial Technology , vol.46 , pp. 136-140
    • Kapich, A.N.1    Korneichik, T.V.2    Hatakka, A.3    Hammel, K.E.4
  • 40
    • 0023478845 scopus 로고
    • Enzymatic "combustion": The microbial degradation of lignin
    • Kirk T.K., Farrell R.L. Enzymatic "combustion": The microbial degradation of lignin. Annual Reviews in Microbiology 1987, 41:465-505.
    • (1987) Annual Reviews in Microbiology , vol.41 , pp. 465-505
    • Kirk, T.K.1    Farrell, R.L.2
  • 42
    • 44849132370 scopus 로고    scopus 로고
    • Decomposition and fungi of needle litter from slow- and fast-growing Norway spruce (Picea abies) clones
    • Korkama-Rajala T., Müller M.M., Pennanen T. Decomposition and fungi of needle litter from slow- and fast-growing Norway spruce (Picea abies) clones. Microbial Ecology 2008, 56:76-89.
    • (2008) Microbial Ecology , vol.56 , pp. 76-89
    • Korkama-Rajala, T.1    Müller, M.M.2    Pennanen, T.3
  • 44
    • 84866234470 scopus 로고    scopus 로고
    • Patterns of fungal communities among and within decaying logs, revealed by 454 sequencing
    • Kubartova A., Ottosson E., Dahlberg A., Stenlid J. Patterns of fungal communities among and within decaying logs, revealed by 454 sequencing. Molecular Ecology 2012, 21:4514-4532.
    • (2012) Molecular Ecology , vol.21 , pp. 4514-4532
    • Kubartova, A.1    Ottosson, E.2    Dahlberg, A.3    Stenlid, J.4
  • 45
    • 0027957704 scopus 로고
    • Crystal structure of the fungal peroxidase from Arthromyces ramosus at 1.9Å resolution: Structural comparisons with the lignin and cytochrome c peroxidases
    • Kunishima N., Fukuyama K., Matsubara H., Hatanaka H., Shibano Y., Amachi T. Crystal structure of the fungal peroxidase from Arthromyces ramosus at 1.9Å resolution: Structural comparisons with the lignin and cytochrome c peroxidases. Journal of Molecular Biology 1994, 235:331-344.
    • (1994) Journal of Molecular Biology , vol.235 , pp. 331-344
    • Kunishima, N.1    Fukuyama, K.2    Matsubara, H.3    Hatanaka, H.4    Shibano, Y.5    Amachi, T.6
  • 46
    • 0142040829 scopus 로고    scopus 로고
    • A novel extracellular multicopper oxidase from Phanerochaete chrysosporium with ferroxidase activity
    • Larrondo L.F., Salas L., Melo F., Vicuña R., Cullen D. A novel extracellular multicopper oxidase from Phanerochaete chrysosporium with ferroxidase activity. Applied and Environmental Microbiology 2003, 69:6257-6263.
    • (2003) Applied and Environmental Microbiology , vol.69 , pp. 6257-6263
    • Larrondo, L.F.1    Salas, L.2    Melo, F.3    Vicuña, R.4    Cullen, D.5
  • 47
    • 84875193804 scopus 로고    scopus 로고
    • Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes
    • Levasseur A., Drula E., Lombard V., Coutinho P.M., Henrissat B. Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes. Biotechnology for Biofuels 2013, 6:41. 10.1186/1754-6834-6-41.
    • (2013) Biotechnology for Biofuels , vol.6 , pp. 41
    • Levasseur, A.1    Drula, E.2    Lombard, V.3    Coutinho, P.M.4    Henrissat, B.5
  • 48
    • 29244469442 scopus 로고    scopus 로고
    • 14C-labelled synthetic lignin and extracellular enzyme activities of the wood-colonizing ascomycetes Xylaria hypoxylon and Xylaria polymorpha
    • 14C-labelled synthetic lignin and extracellular enzyme activities of the wood-colonizing ascomycetes Xylaria hypoxylon and Xylaria polymorpha. Applied Microbiology and Biotechnology 2006, 69:573-579.
    • (2006) Applied Microbiology and Biotechnology , vol.69 , pp. 573-579
    • Liers, C.1    Ullrich, R.2    Steffen, K.T.3    Hatakka, A.4    Hofrichter, M.5
  • 50
    • 84900846518 scopus 로고    scopus 로고
    • 8.1 Puunlahottajat
    • Gaudeamus Helsinki University Press, (in Finnish), S. Timonen, J. Valkonen (Eds.)
    • Lundell T., Mäkelä M. 8.1 Puunlahottajat. Sienten biologia 2013, 259-279. Gaudeamus Helsinki University Press, (in Finnish). S. Timonen, J. Valkonen (Eds.).
    • (2013) Sienten biologia , pp. 259-279
    • Lundell, T.1    Mäkelä, M.2
  • 51
    • 77049096911 scopus 로고    scopus 로고
    • Lignin-modifying enzymes in filamentous basidiomycetes: Ecological, functional and phylogenetic review
    • Lundell T.K., Mäkelä M.R., Hildén K. Lignin-modifying enzymes in filamentous basidiomycetes: Ecological, functional and phylogenetic review. Journal of Basic Microbiology 2010, 50:1-16.
    • (2010) Journal of Basic Microbiology , vol.50 , pp. 1-16
    • Lundell, T.K.1    Mäkelä, M.R.2    Hildén, K.3
  • 52
    • 79958235330 scopus 로고    scopus 로고
    • Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood
    • MacDonald J., Doering M., Canam T., Gong Y.C., Guttman D.S., Campbell M.M., et al. Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood. Applied and Environmental Microbiology 2011, 77:3211-3218.
    • (2011) Applied and Environmental Microbiology , vol.77 , pp. 3211-3218
    • MacDonald, J.1    Doering, M.2    Canam, T.3    Gong, Y.C.4    Guttman, D.S.5    Campbell, M.M.6
  • 53
    • 77952882025 scopus 로고    scopus 로고
    • Lignocellulose-degrading enzymes secreted by Phanerochaeate carnosa grown on spruce and microcrystalline cellulose
    • Mahajan S., Master E.R. Lignocellulose-degrading enzymes secreted by Phanerochaeate carnosa grown on spruce and microcrystalline cellulose. Applied Microbiology and Biotechnology 2010, 86:1903-1914.
    • (2010) Applied Microbiology and Biotechnology , vol.86 , pp. 1903-1914
    • Mahajan, S.1    Master, E.R.2
  • 54
    • 85032069778 scopus 로고
    • Detection of extracellular cellulolytic and proteolytic activity in ectomycorrhizal fungi and Heterobasidion annosum (Fr.) Bref
    • Maijala P., Fagerstedt K., Raudaskoski M. Detection of extracellular cellulolytic and proteolytic activity in ectomycorrhizal fungi and Heterobasidion annosum (Fr.) Bref. New Phytologist 1991, 117:643-648.
    • (1991) New Phytologist , vol.117 , pp. 643-648
    • Maijala, P.1    Fagerstedt, K.2    Raudaskoski, M.3
  • 55
    • 0037117772 scopus 로고    scopus 로고
    • Production of organic acids and oxalate decarboxylase in lignin-degrading white rot fungi
    • Mäkelä M., Galkin S., Hatakka A., Lundell T. Production of organic acids and oxalate decarboxylase in lignin-degrading white rot fungi. Enzyme and Microbial Technology 2002, 30:542-549.
    • (2002) Enzyme and Microbial Technology , vol.30 , pp. 542-549
    • Mäkelä, M.1    Galkin, S.2    Hatakka, A.3    Lundell, T.4
  • 57
    • 77955660027 scopus 로고    scopus 로고
    • Oxalate decarboxylase: Biotechnological update and prevalence of the enzyme in filamentous fungi
    • Mäkelä M.R., Hildén K., Lundell T.K. Oxalate decarboxylase: Biotechnological update and prevalence of the enzyme in filamentous fungi. Applied Microbiology and Biotechnology 2010, 87:801-814.
    • (2010) Applied Microbiology and Biotechnology , vol.87 , pp. 801-814
    • Mäkelä, M.R.1    Hildén, K.2    Lundell, T.K.3
  • 58
    • 82455171991 scopus 로고    scopus 로고
    • ITRAQ-based quantitative secretome analysis of Phanerochaete chrysosporium
    • Manavalan A., Adav S.S., Sze S.K. ITRAQ-based quantitative secretome analysis of Phanerochaete chrysosporium. Journal of Proteomics 2011, 75:642-654.
    • (2011) Journal of Proteomics , vol.75 , pp. 642-654
    • Manavalan, A.1    Adav, S.S.2    Sze, S.K.3
  • 59
    • 67650581301 scopus 로고    scopus 로고
    • Assessment of the pectin degrading enzyme network of Aspergillus niger by functional genomics
    • Martens-Uzunova E.S., Schaap P.J. Assessment of the pectin degrading enzyme network of Aspergillus niger by functional genomics. Fungal Genetics and Biology 2009, 46(Suppl. 1):S170-S179.
    • (2009) Fungal Genetics and Biology , vol.46 , Issue.Suppl. 1
    • Martens-Uzunova, E.S.1    Schaap, P.J.2
  • 60
    • 40449120632 scopus 로고    scopus 로고
    • The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis
    • Martin F., Aerts A., Ahrén D., Brun A., Danchin E.G., Duchaussoy F., et al. The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Nature 2008, 452:88-92.
    • (2008) Nature , vol.452 , pp. 88-92
    • Martin, F.1    Aerts, A.2    Ahrén, D.3    Brun, A.4    Danchin, E.G.5    Duchaussoy, F.6
  • 70
    • 84860511529 scopus 로고    scopus 로고
    • Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen
    • Olson Å., Aerts A., Asiegbu F., Belbahri L., Bouzid O., Broberg A., et al. Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. New Phytologist 2012, 194:1001-1013.
    • (2012) New Phytologist , vol.194 , pp. 1001-1013
    • Olson, Å.1    Aerts, A.2    Asiegbu, F.3    Belbahri, L.4    Bouzid, O.5    Broberg, A.6
  • 72
    • 0344152349 scopus 로고    scopus 로고
    • Roles of diverse fungi in larch needle-litter decomposition
    • Osono T., Fukasawa Y., Takeda H. Roles of diverse fungi in larch needle-litter decomposition. Mycologia 2003, 95:820-826.
    • (2003) Mycologia , vol.95 , pp. 820-826
    • Osono, T.1    Fukasawa, Y.2    Takeda, H.3
  • 73
    • 33746080840 scopus 로고    scopus 로고
    • Fungal decomposition of Abies needle and Betula leaf litter
    • Osono T., Takeda H. Fungal decomposition of Abies needle and Betula leaf litter. Mycologia 2006, 98:172-179.
    • (2006) Mycologia , vol.98 , pp. 172-179
    • Osono, T.1    Takeda, H.2
  • 74
    • 84900850859 scopus 로고    scopus 로고
    • Succession of wood-inhabiting fungal communities. PhD thesis. Faculty of Natural Resources and Agricultural Sciences, Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden.
    • Ottosson, E. (2013). Succession of wood-inhabiting fungal communities. PhD thesis. Faculty of Natural Resources and Agricultural Sciences, Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden.
    • (2013)
    • Ottosson, E.1
  • 75
    • 84883191346 scopus 로고    scopus 로고
    • Combining high-throughput sequencing with fruit body surveys reveals contrasting life-history strategies in fungi
    • Ovaskainen O., Schigel D., Ali-Kovero H., Auvinen P., Paulin L., Nordén B., et al. Combining high-throughput sequencing with fruit body surveys reveals contrasting life-history strategies in fungi. The ISME Journal 2013, 7:1696-1709.
    • (2013) The ISME Journal , vol.7 , pp. 1696-1709
    • Ovaskainen, O.1    Schigel, D.2    Ali-Kovero, H.3    Auvinen, P.4    Paulin, L.5    Nordén, B.6
  • 76
    • 0001272853 scopus 로고    scopus 로고
    • The carbon cycle and atmospheric carbon dioxide
    • Cambridge University Press, J.T. Houghton, Y. Ding, D.J. Griggs, M. Noguer, P.J. van der Linden, X. Dai (Eds.)
    • Prentice I.C., Farquhar G.D., Fasham M.L., Goulden M., Heimann M., Jaramillo V.J., et al. The carbon cycle and atmospheric carbon dioxide. Climate change 2001: The scientific basis 2001, 183-237. Cambridge University Press. J.T. Houghton, Y. Ding, D.J. Griggs, M. Noguer, P.J. van der Linden, X. Dai (Eds.).
    • (2001) Climate change 2001: The scientific basis , pp. 183-237
    • Prentice, I.C.1    Farquhar, G.D.2    Fasham, M.L.3    Goulden, M.4    Heimann, M.5    Jaramillo, V.J.6
  • 77
    • 78649991965 scopus 로고    scopus 로고
    • Litter decomposition: What controls it and how can we alter it to sequester more carbon in forest soils
    • Prescott C.E. Litter decomposition: What controls it and how can we alter it to sequester more carbon in forest soils. Biogeochemistry 2010, 101:133-149.
    • (2010) Biogeochemistry , vol.101 , pp. 133-149
    • Prescott, C.E.1
  • 79
    • 80955142808 scopus 로고    scopus 로고
    • Pleurotus ostreatus heme peroxidases: An in silico analysis from the genome sequence to the enzyme molecular structure
    • Ruiz-Dueñas F.J., Fernandez E., Martínez M.J., Martínez A.T. Pleurotus ostreatus heme peroxidases: An in silico analysis from the genome sequence to the enzyme molecular structure. Comptes Rendus Biologies 2011, 334:795-805.
    • (2011) Comptes Rendus Biologies , vol.334 , pp. 795-805
    • Ruiz-Dueñas, F.J.1    Fernandez, E.2    Martínez, M.J.3    Martínez, A.T.4
  • 80
    • 84892423755 scopus 로고    scopus 로고
    • Lignin-degrading peroxidases in Polyporales: An evolutionary survey based on 10 sequenced genomes
    • Ruiz-Dueñas F.J., Lundell T., Floudas D., Nagy L.G., Barrasa J.M., Hibbett D.S., et al. Lignin-degrading peroxidases in Polyporales: An evolutionary survey based on 10 sequenced genomes. Mycologia 2013, 105:1428-1444.
    • (2013) Mycologia , vol.105 , pp. 1428-1444
    • Ruiz-Dueñas, F.J.1    Lundell, T.2    Floudas, D.3    Nagy, L.G.4    Barrasa, J.M.5    Hibbett, D.S.6
  • 81
    • 67649799362 scopus 로고    scopus 로고
    • Microbial degradation of lignin: How a bulky recalcitrant polymer is efficiently recycled in nature and how we can take advantage of this
    • Ruiz-Dueñas F.J., Martínez A.T. Microbial degradation of lignin: How a bulky recalcitrant polymer is efficiently recycled in nature and how we can take advantage of this. Microbial Biotechnology 2009, 2:164-177.
    • (2009) Microbial Biotechnology , vol.2 , pp. 164-177
    • Ruiz-Dueñas, F.J.1    Martínez, A.T.2
  • 83
    • 84882319822 scopus 로고    scopus 로고
    • Differential proteomic analysis of the secretome of Irpex lacteus and other white-rot fungi during wheat straw pretreatment
    • Salvachúa D., Martínez A.T., Tien M., López-Lucendo M.F., García F., de los Ríos V., et al. Differential proteomic analysis of the secretome of Irpex lacteus and other white-rot fungi during wheat straw pretreatment. Biotechnology for Biofuels 2013, 6:115. 10.1186/1754-6834-6-115.
    • (2013) Biotechnology for Biofuels , vol.6 , pp. 115
    • Salvachúa, D.1    Martínez, A.T.2    Tien, M.3    López-Lucendo, M.F.4    García, F.5    De Los Ríos, V.6
  • 84
    • 67349249841 scopus 로고    scopus 로고
    • The first genome-level transcriptome of the wood-degrading fungus Phanerochaete chrysosporium grown on red oak
    • Sato S., Feltus F.A., Iyer P., Tien M. The first genome-level transcriptome of the wood-degrading fungus Phanerochaete chrysosporium grown on red oak. Current Genetics 2009, 55:273-286.
    • (2009) Current Genetics , vol.55 , pp. 273-286
    • Sato, S.1    Feltus, F.A.2    Iyer, P.3    Tien, M.4
  • 86
    • 0028804764 scopus 로고
    • Organic acid production by Aspergillus niger in recycling culture analyzed by capillary electrophoresis
    • Schrickx J.M., Raedts M.J., Stouthamer A.H., van Verseveld H.W. Organic acid production by Aspergillus niger in recycling culture analyzed by capillary electrophoresis. Analytical Biochemistry 1995, 231:175-181.
    • (1995) Analytical Biochemistry , vol.231 , pp. 175-181
    • Schrickx, J.M.1    Raedts, M.J.2    Stouthamer, A.H.3    van Verseveld, H.W.4
  • 90
    • 84860692234 scopus 로고    scopus 로고
    • Cellulose utilization in forest litter and soil: Identification of bacterial and fungal decomposers
    • Stursova M., Zifcakova L., Leigh M.B., Burgess R., Baldrian P. Cellulose utilization in forest litter and soil: Identification of bacterial and fungal decomposers. FEMS Microbiology Ecology 2012, 80:735-746.
    • (2012) FEMS Microbiology Ecology , vol.80 , pp. 735-746
    • Stursova, M.1    Zifcakova, L.2    Leigh, M.B.3    Burgess, R.4    Baldrian, P.5
  • 91
    • 77952551886 scopus 로고    scopus 로고
    • Ultrahigh (0.93Å) resolution structure of manganese peroxidase from Phanerochaete chrysosporium: Implications for the catalytic mechanism
    • Sundaramoorthy M., Gold M.H., Poulos T.L. Ultrahigh (0.93Å) resolution structure of manganese peroxidase from Phanerochaete chrysosporium: Implications for the catalytic mechanism. Journal of Inorganic Biochemistry 2010, 104:683-690.
    • (2010) Journal of Inorganic Biochemistry , vol.104 , pp. 683-690
    • Sundaramoorthy, M.1    Gold, M.H.2    Poulos, T.L.3
  • 93
    • 77956818710 scopus 로고    scopus 로고
    • Cellotriose and cellotetraose as inducers of the genes encoding cellobiohydrolases in the basidiomycete Phanerochaete chrysosporium
    • Suzuki H., Igarashi K., Samejima M. Cellotriose and cellotetraose as inducers of the genes encoding cellobiohydrolases in the basidiomycete Phanerochaete chrysosporium. Applied and Environmental Microbiology 2010, 76:6164-6170.
    • (2010) Applied and Environmental Microbiology , vol.76 , pp. 6164-6170
    • Suzuki, H.1    Igarashi, K.2    Samejima, M.3
  • 94
    • 84865540130 scopus 로고    scopus 로고
    • Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
    • Suzuki H., Macdonald J., Syed K., Salamov A., Hori C., Aerts A., et al. Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. BMC Genomics 2012, 13:444. 10.1186/1471-2164-13-444.
    • (2012) BMC Genomics , vol.13 , pp. 444
    • Suzuki, H.1    Macdonald, J.2    Syed, K.3    Salamov, A.4    Hori, C.5    Aerts, A.6
  • 95
    • 0028013536 scopus 로고
    • The structure and function of fungal laccases
    • Thurston C. The structure and function of fungal laccases. Microbiology 1994, 140:19-26.
    • (1994) Microbiology , vol.140 , pp. 19-26
    • Thurston, C.1
  • 97
    • 77957727454 scopus 로고    scopus 로고
    • An oxidative enzyme boosting the enzymatic conversion of recalcitrant polysaccharides
    • Vaaje-Kolstad G., Westereng B., Hong S.J., Liu Z., Zhai H., Sørlie M., et al. An oxidative enzyme boosting the enzymatic conversion of recalcitrant polysaccharides. Science 2010, 330:219-222.
    • (2010) Science , vol.330 , pp. 219-222
    • Vaaje-Kolstad, G.1    Westereng, B.2    Hong, S.J.3    Liu, Z.4    Zhai, H.5    Sørlie, M.6
  • 100
  • 103
    • 33646123079 scopus 로고    scopus 로고
    • Computational analysis of the Phanerochaete chrysosporium v2.0 genome database and mass spectrometry identification of peptides in ligninolytic cultures reveal complex mixtures of secreted proteins
    • Vanden Wymelenberg A., Minges P., Sabat G., Martinez D., Aerts A., Salamov A., et al. Computational analysis of the Phanerochaete chrysosporium v2.0 genome database and mass spectrometry identification of peptides in ligninolytic cultures reveal complex mixtures of secreted proteins. Fungal Genetics and Biology 2006, 43:343-356.
    • (2006) Fungal Genetics and Biology , vol.43 , pp. 343-356
    • Vanden Wymelenberg, A.1    Minges, P.2    Sabat, G.3    Martinez, D.4    Aerts, A.5    Salamov, A.6
  • 104
    • 20444468865 scopus 로고    scopus 로고
    • The Phanerochaete chrysosporium secretome: Database predictions and initial mass spectrometry peptide identifications in cellulose-grown medium
    • Vanden Wymelenberg A.V., Sabat G., Martinez D., Rajangam A.S., Teeri T.T., Gaskell J., et al. The Phanerochaete chrysosporium secretome: Database predictions and initial mass spectrometry peptide identifications in cellulose-grown medium. Journal of Biotechnology 2005, 118:17-34.
    • (2005) Journal of Biotechnology , vol.118 , pp. 17-34
    • Vanden Wymelenberg, A.V.1    Sabat, G.2    Martinez, D.3    Rajangam, A.S.4    Teeri, T.T.5    Gaskell, J.6
  • 108
    • 84879500789 scopus 로고    scopus 로고
    • Genes associated with lignin degradation in the polyphagous white-rot pathogen Heterobasidion irregulare show substrate-specific regulation
    • Yakovlev I.A., Hietala A.M., Courty P.-E., Lundell T., Solheim H., Fossdal C.G. Genes associated with lignin degradation in the polyphagous white-rot pathogen Heterobasidion irregulare show substrate-specific regulation. Fungal Genetics and Biology 2013, 56:17-24.
    • (2013) Fungal Genetics and Biology , vol.56 , pp. 17-24
    • Yakovlev, I.A.1    Hietala, A.M.2    Courty, P.-E.3    Lundell, T.4    Solheim, H.5    Fossdal, C.G.6
  • 110
    • 65549098928 scopus 로고    scopus 로고
    • Rates of litter decomposition in terrestrial ecosystems: Global patterns and controlling factors
    • Zhang D., Hui D., Luo Y., Zhou G. Rates of litter decomposition in terrestrial ecosystems: Global patterns and controlling factors. Journal of Plant Ecology 2008, 1:85-93.
    • (2008) Journal of Plant Ecology , vol.1 , pp. 85-93
    • Zhang, D.1    Hui, D.2    Luo, Y.3    Zhou, G.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.