-
1
-
-
74049119347
-
Oxidative polymerisation of models for phenolic lignin end-groups by laccase
-
Areskogh D., Li J., Nousiainen P., Gellerstedt G., Sipilä J., Henriksson G. Oxidative polymerisation of models for phenolic lignin end-groups by laccase. Holzforschung 2010, 64:21-34.
-
(2010)
Holzforschung
, vol.64
, pp. 21-34
-
-
Areskogh, D.1
Li, J.2
Nousiainen, P.3
Gellerstedt, G.4
Sipilä, J.5
Henriksson, G.6
-
2
-
-
27644456718
-
Conifer root and butt rot caused by Heterobasidion annosum (Fr.) Bref. s.l
-
Asiegbu F.O., Adomas A., Stenlid J. Conifer root and butt rot caused by Heterobasidion annosum (Fr.) Bref. s.l. Mol. Plant Pathol. 2005, 6:395-409.
-
(2005)
Mol. Plant Pathol.
, vol.6
, pp. 395-409
-
-
Asiegbu, F.O.1
Adomas, A.2
Stenlid, J.3
-
3
-
-
33645027271
-
Fungal laccases - occurrence and properties
-
Baldrian P. Fungal laccases - occurrence and properties. FEMS Microbiol. Rev. 2006, 30:215-242.
-
(2006)
FEMS Microbiol. Rev.
, vol.30
, pp. 215-242
-
-
Baldrian, P.1
-
4
-
-
0344936053
-
Laccase-less mutants of the white-rot fungus Pycnoporus cinnabarinus cannot delignify kraft pulp
-
Bermek H., Li K., Eriksson K.E.-L. Laccase-less mutants of the white-rot fungus Pycnoporus cinnabarinus cannot delignify kraft pulp. J. Biotechnol. 1998, 66:117-124.
-
(1998)
J. Biotechnol.
, vol.66
, pp. 117-124
-
-
Bermek, H.1
Li, K.2
Eriksson, K.E.-L.3
-
5
-
-
0001685601
-
Screening wood decayed by white rot fungi for preferential lignin degradation
-
Blanchette R.A. Screening wood decayed by white rot fungi for preferential lignin degradation. Appl. Environ. Microbiol. 1984, 48:647-653.
-
(1984)
Appl. Environ. Microbiol.
, vol.48
, pp. 647-653
-
-
Blanchette, R.A.1
-
7
-
-
0037145829
-
Significant levels of extracellular reactive oxygen species produced by brown rot basidiomycetes on cellulose
-
Cohen R., Jensen K.A., Houtman C.J., Hammel K.E. Significant levels of extracellular reactive oxygen species produced by brown rot basidiomycetes on cellulose. FEBS Lett. 2002, 531:483-488.
-
(2002)
FEBS Lett.
, vol.531
, pp. 483-488
-
-
Cohen, R.1
Jensen, K.A.2
Houtman, C.J.3
Hammel, K.E.4
-
8
-
-
65249120695
-
Phylogenetic analysis, genomic organization, and expression analysis of multi-copper oxidases in the ectomycorrhizal basidiomycete Laccaria bicolor
-
Courty P.E., Hoegger P.J., Kilaru S., Kohler A., Buée M., Garbaye J., Martin F., Kües U. Phylogenetic analysis, genomic organization, and expression analysis of multi-copper oxidases in the ectomycorrhizal basidiomycete Laccaria bicolor. New Phytologist. 2009, 182:736-750.
-
(2009)
New Phytologist.
, vol.182
, pp. 736-750
-
-
Courty, P.E.1
Hoegger, P.J.2
Kilaru, S.3
Kohler, A.4
Buée, M.5
Garbaye, J.6
Martin, F.7
Kües, U.8
-
9
-
-
2142738304
-
WebLogo: a sequence logo generator
-
Crooks G.E., Hon G., Chandonia J.-M., Brenner S.E. WebLogo: a sequence logo generator. Genome Res. 2004, 14:1188-1190.
-
(2004)
Genome Res.
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.-M.3
Brenner, S.E.4
-
10
-
-
0031881136
-
The saprotrophic wood-degrading abilities of Heterobasidium annosum intersterility groups P and S
-
Daniel G., Asiegbu F., Johansson M. The saprotrophic wood-degrading abilities of Heterobasidium annosum intersterility groups P and S. Mycol. Res. 1998, 102:991-997.
-
(1998)
Mycol. Res.
, vol.102
, pp. 991-997
-
-
Daniel, G.1
Asiegbu, F.2
Johansson, M.3
-
11
-
-
3042521098
-
Improved prediction of signal peptides: SignalP 3.0
-
Dyrløv Bendtsen J., Nielsen H., von Heijne G., Brunak S. Improved prediction of signal peptides: SignalP 3.0. J. Mol. Biol. 2004, 340:783-795.
-
(2004)
J. Mol. Biol.
, vol.340
, pp. 783-795
-
-
Dyrløv Bendtsen, J.1
Nielsen, H.2
von Heijne, G.3
Brunak, S.4
-
12
-
-
79961228770
-
The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi
-
Eastwood D.C., Floudas D., Binder M., Majcherczyk A., Schneider P., Aerts A., Asiegbu F.O., Baker S.E., Barry K., Bendiksby M., Blumentritt M., Coutinho P.M., Cullen D., de Vries R.P., Gathman A., Goodell B., Henrissat B., Ihrmark K., Kauserud H., Kohler A., LaButti K., Lapidus A., Lavin J.L., Lee Y.-H., Lindquist E., Lilly W., Lucas S., Morin E., Murat C., Oguiza J.A., Park J., Pisabarro A.G., Riley R., Rosling A., Salamov A., Schmidt O., Schmutz J., Skrede I., Stenlid J., Wiebenga A., Xie X., Kües U., Hibbett D.S., Hoffmeister D., Högberg N., Martin F., Grigoriev I.V., Watkinson S.C. The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi. Science 2011, 333:762-765.
-
(2011)
Science
, vol.333
, pp. 762-765
-
-
Eastwood, D.C.1
Floudas, D.2
Binder, M.3
Majcherczyk, A.4
Schneider, P.5
Aerts, A.6
Asiegbu, F.O.7
Baker, S.E.8
Barry, K.9
Bendiksby, M.10
Blumentritt, M.11
Coutinho, P.M.12
Cullen, D.13
de Vries, R.P.14
Gathman, A.15
Goodell, B.16
Henrissat, B.17
Ihrmark, K.18
Kauserud, H.19
Kohler, A.20
LaButti, K.21
Lapidus, A.22
Lavin, J.L.23
Lee, Y.-H.24
Lindquist, E.25
Lilly, W.26
Lucas, S.27
Morin, E.28
Murat, C.29
Oguiza, J.A.30
Park, J.31
Pisabarro, A.G.32
Riley, R.33
Rosling, A.34
Salamov, A.35
Schmidt, O.36
Schmutz, J.37
Skrede, I.38
Stenlid, J.39
Wiebenga, A.40
Xie, X.41
Kües, U.42
Hibbett, D.S.43
Hoffmeister, D.44
Högberg, N.45
Martin, F.46
Grigoriev, I.V.47
Watkinson, S.C.48
more..
-
13
-
-
23644451045
-
Spectral and catalytic properties of aryl-alcohol oxidase, a fungal flavoenzyme acting on polyunsaturated alcohols
-
Ferreira P., Medina M., Guillén F., Martínez M.J., Van Berkel W.J.H., Martínez A.T. Spectral and catalytic properties of aryl-alcohol oxidase, a fungal flavoenzyme acting on polyunsaturated alcohols. Biochem. J. 2005, 389:731-738.
-
(2005)
Biochem. J.
, vol.389
, pp. 731-738
-
-
Ferreira, P.1
Medina, M.2
Guillén, F.3
Martínez, M.J.4
Van Berkel, W.J.H.5
Martínez, A.T.6
-
14
-
-
70049087992
-
Aryl-alcohol oxidase involved in lignin degradation
-
Ferreira P., Hernandez-Ortega A., Herguedas B., Martínez Á.T., Medina M. Aryl-alcohol oxidase involved in lignin degradation. J. Biol. Chem. 2009, 284:24840-24847.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 24840-24847
-
-
Ferreira, P.1
Hernandez-Ortega, A.2
Herguedas, B.3
Martínez Á, T.4
Medina, M.5
-
15
-
-
84862977387
-
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
-
Floudas D., Binder M., Riley R., Barry K., Blanchette R.A., Henrissat B., Martinez A.T., Otillar R., Spatafora J.W., Yadav J.S., Aerts A., Benoit I., Boyd A., Carlson A., Copeland A., Coutinho P.M., De Vries R.P., Ferreira P., Findley K., Foster B., Gaskell J., Glotzer D., Gorecki P., Heitman J., Hesse C., Hori C., Igarashi K., Jurgens J.A., Kallen N., Kersten P., Kohler A., Kues U., Kumar T.K.A., Kuo A., Labutti K., Larrondo L.F., Lindquist E., Ling A., Lombard V., Lucas S., Lundell T., Martin R., Mclaughlin D.J., Morgenstern I., Morin E., Murat C., Nagy L.G., Nolan M., Ohm R.A., Patyshakuliyeva A., Rokas A., Ruiz-Duenas F.J., Sabat G., Salamov A., Samejima M., Schmutz J., Slot J.C., John F.S., Stenlid J., Sun H., Sun S., Syed K., Tsang A., Wiebenga A., Young D., Pisabarro A., Eastwood D.C., Martin F., Cullen D., Grigoriev I.V., Hibbett D.S. The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science 2012, 336:1715-1719.
-
(2012)
Science
, vol.336
, pp. 1715-1719
-
-
Floudas, D.1
Binder, M.2
Riley, R.3
Barry, K.4
Blanchette, R.A.5
Henrissat, B.6
Martinez, A.T.7
Otillar, R.8
Spatafora, J.W.9
Yadav, J.S.10
Aerts, A.11
Benoit, I.12
Boyd, A.13
Carlson, A.14
Copeland, A.15
Coutinho, P.M.16
De Vries, R.P.17
Ferreira, P.18
Findley, K.19
Foster, B.20
Gaskell, J.21
Glotzer, D.22
Gorecki, P.23
Heitman, J.24
Hesse, C.25
Hori, C.26
Igarashi, K.27
Jurgens, J.A.28
Kallen, N.29
Kersten, P.30
Kohler, A.31
Kues, U.32
Kumar, T.K.A.33
Kuo, A.34
Labutti, K.35
Larrondo, L.F.36
Lindquist, E.37
Ling, A.38
Lombard, V.39
Lucas, S.40
Lundell, T.41
Martin, R.42
Mclaughlin, D.J.43
Morgenstern, I.44
Morin, E.45
Murat, C.46
Nagy, L.G.47
Nolan, M.48
Ohm, R.A.49
Patyshakuliyeva, A.50
Rokas, A.51
Ruiz-Duenas, F.J.52
Sabat, G.53
Salamov, A.54
Samejima, M.55
Schmutz, J.56
Slot, J.C.57
John, F.S.58
Stenlid, J.59
Sun, H.60
Sun, S.61
Syed, K.62
Tsang, A.63
Wiebenga, A.64
Young, D.65
Pisabarro, A.66
Eastwood, D.C.67
Martin, F.68
Cullen, D.69
Grigoriev, I.V.70
Hibbett, D.S.71
more..
-
16
-
-
0043122944
-
ExPASy: the proteomics server for in-depth protein knowledge and analysis
-
Gasteiger E., Gattiker A., Hoogland C., Ivanyi I., Appel R.D., Bairoch A. ExPASy: the proteomics server for in-depth protein knowledge and analysis. Nucl. Acids Res. 2003, 31:3784-3788.
-
(2003)
Nucl. Acids Res.
, vol.31
, pp. 3784-3788
-
-
Gasteiger, E.1
Gattiker, A.2
Hoogland, C.3
Ivanyi, I.4
Appel, R.D.5
Bairoch, A.6
-
17
-
-
67149146241
-
Induction of extracellular hydroxyl radical production by white-rot fungi through quinone redox cycling
-
Gomez-Toribio V., Garcia-Martin A.B., Martinez M.J., Martinez A.T., Guillen F. Induction of extracellular hydroxyl radical production by white-rot fungi through quinone redox cycling. Appl. Environ. Microbiol. 2009, 75:3944-3953.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 3944-3953
-
-
Gomez-Toribio, V.1
Garcia-Martin, A.B.2
Martinez, M.J.3
Martinez, A.T.4
Guillen, F.5
-
18
-
-
0031105162
-
Quinone redox cycling in the ligninolytic fungus Pleurotus eryngii leading to extracellular production of superoxide anion radical
-
Guillén F., Martínez M.J., Muñoz C., Martínez A.T. Quinone redox cycling in the ligninolytic fungus Pleurotus eryngii leading to extracellular production of superoxide anion radical. Arch. Biochem. Biophys. 1997, 339:190-199.
-
(1997)
Arch. Biochem. Biophys.
, vol.339
, pp. 190-199
-
-
Guillén, F.1
Martínez, M.J.2
Muñoz, C.3
Martínez, A.T.4
-
19
-
-
13244283468
-
Manganese peroxidases, laccases and oxalic acid from the selective white-rot fungus Physisporinus rivulosus grown on spruce wood chips
-
Hakala T.K., Lundell T., Galkin S., Maijala P., Kalkkinen N., Hatakka A. Manganese peroxidases, laccases and oxalic acid from the selective white-rot fungus Physisporinus rivulosus grown on spruce wood chips. Enzyme Microb. Technol. 2005, 36:461-468.
-
(2005)
Enzyme Microb. Technol.
, vol.36
, pp. 461-468
-
-
Hakala, T.K.1
Lundell, T.2
Galkin, S.3
Maijala, P.4
Kalkkinen, N.5
Hatakka, A.6
-
20
-
-
33751535003
-
Differential regulation of manganese peroxidases and characterization of two variable MnP encoding genes in the white-rot fungus Physisporinus rivulosus
-
Hakala T., Hildén K., Maijala P., Olsson C., Hatakka A. Differential regulation of manganese peroxidases and characterization of two variable MnP encoding genes in the white-rot fungus Physisporinus rivulosus. Appl. Microbiol. Biotechnol. 2006, 73:839-849.
-
(2006)
Appl. Microbiol. Biotechnol.
, vol.73
, pp. 839-849
-
-
Hakala, T.1
Hildén, K.2
Maijala, P.3
Olsson, C.4
Hatakka, A.5
-
21
-
-
43849099090
-
Role of fungal peroxidases in biological ligninolysis
-
Hammel K.E., Cullen D. Role of fungal peroxidases in biological ligninolysis. Curr. Opin. Plant Biol. 2008, 11:349-355.
-
(2008)
Curr. Opin. Plant Biol.
, vol.11
, pp. 349-355
-
-
Hammel, K.E.1
Cullen, D.2
-
22
-
-
0028347666
-
Lignin-modifying enzymes from selected white-rot fungi: production and role from in lignin degradation
-
Hatakka A. Lignin-modifying enzymes from selected white-rot fungi: production and role from in lignin degradation. FEMS Microbiol. Rev. 1994, 13:125-135.
-
(1994)
FEMS Microbiol. Rev.
, vol.13
, pp. 125-135
-
-
Hatakka, A.1
-
23
-
-
80052617049
-
Fungal biodegradation of lignocelluloses
-
Springer-Verlag, Berlin, Heidelberg, M. Hofrichter (Ed.)
-
Hatakka A., Hammel K.E. Fungal biodegradation of lignocelluloses. The Mycota X Industrial Applications 2010, 319-340. Springer-Verlag, Berlin, Heidelberg. M. Hofrichter (Ed.).
-
(2010)
The Mycota X Industrial Applications
, pp. 319-340
-
-
Hatakka, A.1
Hammel, K.E.2
-
24
-
-
10644252147
-
Manganese Peroxidase and Its Role in the Degradation of Wood Lignin
-
American Chemical Society, S.D. Mansfield, J.N. Saddler (Eds.)
-
Hatakka A., Lundell T., Hofrichter M., Maijala P. Manganese Peroxidase and Its Role in the Degradation of Wood Lignin. Applications of Enzymes to Lignocellulosics 2003, 230-243. American Chemical Society. S.D. Mansfield, J.N. Saddler (Eds.).
-
(2003)
Applications of Enzymes to Lignocellulosics
, pp. 230-243
-
-
Hatakka, A.1
Lundell, T.2
Hofrichter, M.3
Maijala, P.4
-
25
-
-
0032145444
-
Purification and characterization of peroxidases from the dye-decolorizing fungus Bjerkandera adusta
-
Heinfling A., Martínez M.a.J., Martínez A.T., Bergbauer M., Szewzyk U. Purification and characterization of peroxidases from the dye-decolorizing fungus Bjerkandera adusta. FEMS Microbiol. Lett. 1998, 165:43-50.
-
(1998)
FEMS Microbiol. Lett.
, vol.165
, pp. 43-50
-
-
Heinfling, A.1
Martínez, M.2
Martínez, A.T.3
Bergbauer, M.4
Szewzyk, U.5
-
27
-
-
0034647983
-
Is cellobiose dehydrogenase from Phanerochaete chrysosporium a lignin degrading enzyme?
-
Henriksson G., Zhang L., Li J., Ljungquist P., Reitberger T., Pettersson G., Johansson G. Is cellobiose dehydrogenase from Phanerochaete chrysosporium a lignin degrading enzyme?. Biochim. Biophys. Acta (BBA) - Protein Struct. Mol. Enzymol. 2000, 1480:83-91.
-
(2000)
Biochim. Biophys. Acta (BBA) - Protein Struct. Mol. Enzymol.
, vol.1480
, pp. 83-91
-
-
Henriksson, G.1
Zhang, L.2
Li, J.3
Ljungquist, P.4
Reitberger, T.5
Pettersson, G.6
Johansson, G.7
-
28
-
-
67149131600
-
Spatial patterns in hyphal growth and substrate exploitation within norway spruce stems colonized by the pathogenic white-rot fungus Heterobasidion parviporum
-
Hietala A.M., Nagy N.E., Steffenrem A., Kvaalen H., Fossdal C.G., Solheim H. Spatial patterns in hyphal growth and substrate exploitation within norway spruce stems colonized by the pathogenic white-rot fungus Heterobasidion parviporum. Appl. Environ. Microbiol. 2009, 75:4069-4078.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 4069-4078
-
-
Hietala, A.M.1
Nagy, N.E.2
Steffenrem, A.3
Kvaalen, H.4
Fossdal, C.G.5
Solheim, H.6
-
29
-
-
16244401504
-
The two manganese peroxidases Pr-MnP2 and Pr-MnP3 of Phlebia radiata, a lignin-degrading basidiomycete, are phylogenetically and structurally divergent
-
Hildén K., Martinez A.T., Hatakka A., Lundell T. The two manganese peroxidases Pr-MnP2 and Pr-MnP3 of Phlebia radiata, a lignin-degrading basidiomycete, are phylogenetically and structurally divergent. Fungal Genet. Biol. 2005, 42:403-419.
-
(2005)
Fungal Genet. Biol.
, vol.42
, pp. 403-419
-
-
Hildén, K.1
Martinez, A.T.2
Hatakka, A.3
Lundell, T.4
-
31
-
-
33646268426
-
Phylogenetic comparison and classification of laccase and related multicopper oxidase protein sequences
-
Hoegger P.J., Kilaru S., James T.Y., Thacker J.R., Kües U. Phylogenetic comparison and classification of laccase and related multicopper oxidase protein sequences. FEBS J. 2006, 273:2308-2326.
-
(2006)
FEBS J.
, vol.273
, pp. 2308-2326
-
-
Hoegger, P.J.1
Kilaru, S.2
James, T.Y.3
Thacker, J.R.4
Kües, U.5
-
32
-
-
0037117763
-
Review: lignin conversion by manganese peroxidase (MnP)
-
Hofrichter M. Review: lignin conversion by manganese peroxidase (MnP). Enzyme Microb. Technol. 2002, 30:454-466.
-
(2002)
Enzyme Microb. Technol.
, vol.30
, pp. 454-466
-
-
Hofrichter, M.1
-
33
-
-
0035489759
-
Conversion of milled pine wood by manganese peroxidase from Phlebia radiata
-
Hofrichter M., Lundell T., Hatakka A. Conversion of milled pine wood by manganese peroxidase from Phlebia radiata. Appl. Environ. Microbiol. 2001, 67:4588-4593.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 4588-4593
-
-
Hofrichter, M.1
Lundell, T.2
Hatakka, A.3
-
34
-
-
77954296079
-
New and classic families of secreted fungal heme peroxidases
-
Hofrichter M., Ullrich R., Pecyna M., Liers C., Lundell T. New and classic families of secreted fungal heme peroxidases. Appl. Microbiol. Biotechnol. 2010, 87:871-897.
-
(2010)
Appl. Microbiol. Biotechnol.
, vol.87
, pp. 871-897
-
-
Hofrichter, M.1
Ullrich, R.2
Pecyna, M.3
Liers, C.4
Lundell, T.5
-
35
-
-
0035379763
-
Pathways for extracellular fenton chemistry in the brown rot basidiomycete Gloeophyllum trabeum
-
Jensen K.A., Houtman C.J., Ryan Z.C., Hammel K.E. Pathways for extracellular fenton chemistry in the brown rot basidiomycete Gloeophyllum trabeum. Appl. Environ. Microbiol. 2001, 67:2705-2711.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 2705-2711
-
-
Jensen, K.A.1
Houtman, C.J.2
Ryan, Z.C.3
Hammel, K.E.4
-
36
-
-
85032069756
-
Effect of spruce root constituents on extracellular enzymes of Fomes annosus
-
Johansson M., Popoff T., Theander O. Effect of spruce root constituents on extracellular enzymes of Fomes annosus. Physiol. Plant. 1976, 37:275-282.
-
(1976)
Physiol. Plant.
, vol.37
, pp. 275-282
-
-
Johansson, M.1
Popoff, T.2
Theander, O.3
-
37
-
-
33845956242
-
Extracellular oxidative systems of the lignin-degrading basidiomycete Phanerochaete chrysosporium
-
Kersten P., Cullen D. Extracellular oxidative systems of the lignin-degrading basidiomycete Phanerochaete chrysosporium. Fungal Genet. Biol. 2007, 44:77-87.
-
(2007)
Fungal Genet. Biol.
, vol.44
, pp. 77-87
-
-
Kersten, P.1
Cullen, D.2
-
38
-
-
33745125003
-
The laccase multi-gene family in Coprinopsis cinerea has 17 different members that divide into two distinct subfamilies
-
Kilaru S., Hoegger P., Kües U. The laccase multi-gene family in Coprinopsis cinerea has 17 different members that divide into two distinct subfamilies. Curr. Genet. 2006, 50:45-60.
-
(2006)
Curr. Genet.
, vol.50
, pp. 45-60
-
-
Kilaru, S.1
Hoegger, P.2
Kües, U.3
-
39
-
-
12144251398
-
Manganese peroxidase of Agaricus bisporus: grain bran-promoted production and gene characterization
-
Lankinen P., Hildén K., Aro N., Salkinoja-Salonen M., Hatakka A. Manganese peroxidase of Agaricus bisporus: grain bran-promoted production and gene characterization. Appl. Microbiol. Biotechnol. 2005, 66:401-407.
-
(2005)
Appl. Microbiol. Biotechnol.
, vol.66
, pp. 401-407
-
-
Lankinen, P.1
Hildén, K.2
Aro, N.3
Salkinoja-Salonen, M.4
Hatakka, A.5
-
40
-
-
34250704724
-
Cloning and characterization of the genes encoding the high-affinity iron-uptake protein complex Fet3/Ftr1 in the basidiomycete Phanerochaete chrysosporium
-
Larrondo L.F., Canessa P., Melo F., Polanco R., Vicuña R. Cloning and characterization of the genes encoding the high-affinity iron-uptake protein complex Fet3/Ftr1 in the basidiomycete Phanerochaete chrysosporium. Microbiology 2007, 153:1772-1780.
-
(2007)
Microbiology
, vol.153
, pp. 1772-1780
-
-
Larrondo, L.F.1
Canessa, P.2
Melo, F.3
Polanco, R.4
Vicuña, R.5
-
41
-
-
41649104638
-
FOLy: an integrated database for the classification and functional annotation of fungal oxidoreductases potentially involved in the degradation of lignin and related aromatic compounds
-
Levasseur A., Piumi F., Coutinho P.M., Rancurel C., Asther M., Delattre M., Henrissat B., Pontarotti P., Asther M., Record E. FOLy: an integrated database for the classification and functional annotation of fungal oxidoreductases potentially involved in the degradation of lignin and related aromatic compounds. Fungal Genet. Biol. 2008, 45:638-645.
-
(2008)
Fungal Genet. Biol.
, vol.45
, pp. 638-645
-
-
Levasseur, A.1
Piumi, F.2
Coutinho, P.M.3
Rancurel, C.4
Asther, M.5
Delattre, M.6
Henrissat, B.7
Pontarotti, P.8
Asther, M.9
Record, E.10
-
42
-
-
77049096911
-
Lignin-modifying enzymes in filamentous basidiomycetes - ecological, functional and phylogenetic review
-
Lundell T.K., Mäkelä M.R., Hildén K. Lignin-modifying enzymes in filamentous basidiomycetes - ecological, functional and phylogenetic review. J. Basic Microbiol. 2010, 50:5-20.
-
(2010)
J. Basic Microbiol.
, vol.50
, pp. 5-20
-
-
Lundell, T.K.1
Mäkelä, M.R.2
Hildén, K.3
-
43
-
-
0038670489
-
A peroxidase gene family and gene trees in Heterobasidion and related genera
-
Maijala P., Harrington T.C., Raudaskoski M. A peroxidase gene family and gene trees in Heterobasidion and related genera. Mycologia 2003, 95:209-221.
-
(2003)
Mycologia
, vol.95
, pp. 209-221
-
-
Maijala, P.1
Harrington, T.C.2
Raudaskoski, M.3
-
45
-
-
2542601548
-
Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78
-
Martinez D., Larrondo L.F., Putnam N., Gelpke M.D.S., Huang K., Chapman J., Helfenbein K.G., Ramaiya P., Detter J.C., Larimer F., Coutinho P.M., Henrissat B., Berka R., Cullen D., Rokhsar D. Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78. Nat. Biotechnol. 2004, 22:695-700.
-
(2004)
Nat. Biotechnol.
, vol.22
, pp. 695-700
-
-
Martinez, D.1
Larrondo, L.F.2
Putnam, N.3
Gelpke, M.D.S.4
Huang, K.5
Chapman, J.6
Helfenbein, K.G.7
Ramaiya, P.8
Detter, J.C.9
Larimer, F.10
Coutinho, P.M.11
Henrissat, B.12
Berka, R.13
Cullen, D.14
Rokhsar, D.15
-
46
-
-
60549116487
-
Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion
-
Martinez D., Challacombe J., Morgenstern I., Hibbett D., Schmoll M., Kubicek C.P., Ferreira P., Ruiz-Duenas F.J., Martinez A.T., Kersten P., Hammel K.E., Vanden Wymelenberg A., Gaskell J., Lindquist E., Sabat G., Splinter BonDurant S., Larrondo L.F., Canessa P., Vicuna R., Yadav J., Doddapaneni H., Subramanian V., Pisabarro A.G., Lavín J.L., Oguiza J.A., Master E., Henrissat B., Coutinho P.M., Harris P., Magnuson J.K., Baker S.E., Bruno K., Kenealy W., Hoegger P.J., Kües U., Ramaiya P., Lucas S., Salamov A., Shapiro H., Tu H., Chee C.L., Misra M., Xie G., Teter S., Yaver D., James T., Mokrejs M., Pospisek M., Grigoriev I.V., Brettin T., Rokhsar D., Berka R., Cullen D. Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion. PNAS 2009, 106:1954-1959.
-
(2009)
PNAS
, vol.106
, pp. 1954-1959
-
-
Martinez, D.1
Challacombe, J.2
Morgenstern, I.3
Hibbett, D.4
Schmoll, M.5
Kubicek, C.P.6
Ferreira, P.7
Ruiz-Duenas, F.J.8
Martinez, A.T.9
Kersten, P.10
Hammel, K.E.11
Vanden Wymelenberg, A.12
Gaskell, J.13
Lindquist, E.14
Sabat, G.15
Splinter BonDurant, S.16
Larrondo, L.F.17
Canessa, P.18
Vicuna, R.19
Yadav, J.20
Doddapaneni, H.21
Subramanian, V.22
Pisabarro, A.G.23
Lavín, J.L.24
Oguiza, J.A.25
Master, E.26
Henrissat, B.27
Coutinho, P.M.28
Harris, P.29
Magnuson, J.K.30
Baker, S.E.31
Bruno, K.32
Kenealy, W.33
Hoegger, P.J.34
Kües, U.35
Ramaiya, P.36
Lucas, S.37
Salamov, A.38
Shapiro, H.39
Tu, H.40
Chee, C.L.41
Misra, M.42
Xie, G.43
Teter, S.44
Yaver, D.45
James, T.46
Mokrejs, M.47
Pospisek, M.48
Grigoriev, I.V.49
Brettin, T.50
Rokhsar, D.51
Berka, R.52
Cullen, D.53
more..
-
47
-
-
67649770563
-
Enzymatic delignification of plant cell wall: from nature to mill
-
Martínez A.T., Ruiz-Dueñas F.J., Martínez M.J., del Río J.C., Gutiérrez A. Enzymatic delignification of plant cell wall: from nature to mill. Curr. Opin. Biotechnol. 2009, 20:348-357.
-
(2009)
Curr. Opin. Biotechnol.
, vol.20
, pp. 348-357
-
-
Martínez, A.T.1
Ruiz-Dueñas, F.J.2
Martínez, M.J.3
del Río, J.C.4
Gutiérrez, A.5
-
48
-
-
84866889608
-
Xylem defense wood of Norway spruce compromised by the pathogenic white-rot fungus Heterobasidion parviporum shows a prolonged period of selective decay
-
doi 10.1007/s00425-012-1664-4
-
Nagy N.E., Ballance S., Kvaalen H., Fongen M., Fossdal C.G., Solheim H., Hietala A.M. Xylem defense wood of Norway spruce compromised by the pathogenic white-rot fungus Heterobasidion parviporum shows a prolonged period of selective decay. Planta 2012, 236:1125-1133. doi 10.1007/s00425-012-1664-4.
-
(2012)
Planta
, vol.236
, pp. 1125-1133
-
-
Nagy, N.E.1
Ballance, S.2
Kvaalen, H.3
Fongen, M.4
Fossdal, C.G.5
Solheim, H.6
Hietala, A.M.7
-
49
-
-
0003144686
-
Taxonomy of the genus Heterobasidion
-
CAB International, London, S. Woodward (Ed.)
-
Niemelä T., Korhonen K. Taxonomy of the genus Heterobasidion. Heterobasidion annosum: Biology, Ecology, Impact and Control 1998, 27-33. CAB International, London. S. Woodward (Ed.).
-
(1998)
Heterobasidion annosum: Biology, Ecology, Impact and Control
, pp. 27-33
-
-
Niemelä, T.1
Korhonen, K.2
-
50
-
-
0025378234
-
The effect of culture conditions on the production of lignin modifying enzymes by the white-rot fungus Phlebia radiata
-
Niku-Paavola M.L., Karhunen E., Kantelinen A., Viikari L., Lundell T., Hatakka A. The effect of culture conditions on the production of lignin modifying enzymes by the white-rot fungus Phlebia radiata. J. Biotechnol. 1990, 13:211-221.
-
(1990)
J. Biotechnol.
, vol.13
, pp. 211-221
-
-
Niku-Paavola, M.L.1
Karhunen, E.2
Kantelinen, A.3
Viikari, L.4
Lundell, T.5
Hatakka, A.6
-
51
-
-
77956685978
-
Genome sequence of the model mushroom Schizophyllum commune
-
Ohm R.A., de Jong J.F., Lugones L.G., Aerts A., Kothe E., Stajich J.E., de Vries R.P., Record E., Levasseur A., Baker S.E., Bartholomew K.A., Coutinho P.M., Erdmann S., Fowler T.J., Gathman A.C., Lombard V., Henrissat B., Knabe N., Kues U., Lilly W.W., Lindquist E., Lucas S., Magnuson J.K., Piumi F., Raudaskoski M., Salamov A., Schmutz J., Schwarze F.W.M.R., vanKuyk P.A., Horton J.S., Grigoriev I.V., Wosten H.A.B. Genome sequence of the model mushroom Schizophyllum commune. Nat. Biotechnol. 2010, 28:957-963.
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 957-963
-
-
Ohm, R.A.1
de Jong, J.F.2
Lugones, L.G.3
Aerts, A.4
Kothe, E.5
Stajich, J.E.6
de Vries, R.P.7
Record, E.8
Levasseur, A.9
Baker, S.E.10
Bartholomew, K.A.11
Coutinho, P.M.12
Erdmann, S.13
Fowler, T.J.14
Gathman, A.C.15
Lombard, V.16
Henrissat, B.17
Knabe, N.18
Kues, U.19
Lilly, W.W.20
Lindquist, E.21
Lucas, S.22
Magnuson, J.K.23
Piumi, F.24
Raudaskoski, M.25
Salamov, A.26
Schmutz, J.27
Schwarze, F.W.M.R.28
vanKuyk, P.A.29
Horton, J.S.30
Grigoriev, I.V.31
Wosten, H.A.B.32
more..
-
52
-
-
84860511529
-
Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen
-
Olson Å., Aerts A., Asiegbu F., Belbahri L., Bouzid O., Broberg A., Canbäck B., Coutinho P.M., Cullen D., Dalman K., Deflorio G., van Diepen L.T.A., Dunand C., Duplessis S., Durling M., Gonthier P., Grimwood J., Fossdal C.G., Hansson D., Henrissat B., Hietala A., Himmelstrand K., Hoffmeister D., Högberg N., James T.Y., Karlsson M., Kohler A., Kües U., Lee Y.-H., Lin Y.-C., Lind M., Lindquist E., Lombard V., Lucas S., Lundén K., Morin E., Murat C., Park J., Raffaello T., Rouzé P., Salamov A., Schmutz J., Solheim H., Ståhlberg J., Vélëz H., de Vries Ronald P., Wiebenga A., Woodward S., Yakovlev I., Garbelotto M., Martin F., Grigoriev I.V., Stenlid J. Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. New Phytol. 2012, 194:1001-1012.
-
(2012)
New Phytol.
, vol.194
, pp. 1001-1012
-
-
Olson, Å.1
Aerts, A.2
Asiegbu, F.3
Belbahri, L.4
Bouzid, O.5
Broberg, A.6
Canbäck, B.7
Coutinho, P.M.8
Cullen, D.9
Dalman, K.10
Deflorio, G.11
van Diepen, L.T.A.12
Dunand, C.13
Duplessis, S.14
Durling, M.15
Gonthier, P.16
Grimwood, J.17
Fossdal, C.G.18
Hansson, D.19
Henrissat, B.20
Hietala, A.21
Himmelstrand, K.22
Hoffmeister, D.23
Högberg, N.24
James, T.Y.25
Karlsson, M.26
Kohler, A.27
Kües, U.28
Lee, Y.-H.29
Lin, Y.-C.30
Lind, M.31
Lindquist, E.32
Lombard, V.33
Lucas, S.34
Lundén, K.35
Morin, E.36
Murat, C.37
Park, J.38
Raffaello, T.39
Rouzé, P.40
Salamov, A.41
Schmutz, J.42
Solheim, H.43
Ståhlberg, J.44
Vélëz, H.45
de Vries, R.P.46
Wiebenga, A.47
Woodward, S.48
Yakovlev, I.49
Garbelotto, M.50
Martin, F.51
Grigoriev, I.V.52
Stenlid, J.53
more..
-
53
-
-
77949914791
-
Heterobasidion occidentale sp. nov. and Heterobasidion irregulare nom. nov.: a disposition of North American Heterobasidion biological species
-
Otrosina W.J., Garbelotto M. Heterobasidion occidentale sp. nov. and Heterobasidion irregulare nom. nov.: a disposition of North American Heterobasidion biological species. Fungal Biol. 2010, 114:16-25.
-
(2010)
Fungal Biol.
, vol.114
, pp. 16-25
-
-
Otrosina, W.J.1
Garbelotto, M.2
-
54
-
-
67649799362
-
Microbial degradation of lignin: how a bulky recalcitrant polymer is efficiently recycled in nature and how we can take advantage of this
-
Ruiz-Dueñas F.J., Martínez Á.T. Microbial degradation of lignin: how a bulky recalcitrant polymer is efficiently recycled in nature and how we can take advantage of this. Microb. Biotechnol. 2009, 2:164-177.
-
(2009)
Microb. Biotechnol.
, vol.2
, pp. 164-177
-
-
Ruiz-Dueñas, F.J.1
Martínez Á, T.2
-
55
-
-
80955142808
-
Pleurotus ostreatus heme peroxidases: an in silico analysis from the genome sequence to the enzyme molecular structure
-
Ruiz-Dueñas F.J., Fernández E., Martínez M.J., Martínez A.T. Pleurotus ostreatus heme peroxidases: an in silico analysis from the genome sequence to the enzyme molecular structure. C. R. Biol. 2011, 334:795-805.
-
(2011)
C. R. Biol.
, vol.334
, pp. 795-805
-
-
Ruiz-Dueñas, F.J.1
Fernández, E.2
Martínez, M.J.3
Martínez, A.T.4
-
56
-
-
0001759088
-
The response of sapwood of Norway spruce to infection by Fomes annosus
-
Shain L. The response of sapwood of Norway spruce to infection by Fomes annosus. Phytopathology 1971, 61:301-307.
-
(1971)
Phytopathology
, vol.61
, pp. 301-307
-
-
Shain, L.1
-
57
-
-
0028587337
-
The crystal structure of manganese peroxidase from Phanerochaete chrysosporium at 2.06-A resolution
-
Sundaramoorthy M., Kishi K., Gold M.H., Poulos T.L. The crystal structure of manganese peroxidase from Phanerochaete chrysosporium at 2.06-A resolution. J. Biol. Chem. 1994, 269:32759-32767.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 32759-32767
-
-
Sundaramoorthy, M.1
Kishi, K.2
Gold, M.H.3
Poulos, T.L.4
-
59
-
-
0029871579
-
The identification and characterization of four laccases from the plant pathogenic fungus Rhizoctonia solani
-
Wahleithner J., Xu F., Brown K., Brown S., Golightly E., Halkier T., Kauppinen S., Pederson A., Schneider P. The identification and characterization of four laccases from the plant pathogenic fungus Rhizoctonia solani. Curr. Genet. 1996, 29:395-403.
-
(1996)
Curr. Genet.
, vol.29
, pp. 395-403
-
-
Wahleithner, J.1
Xu, F.2
Brown, K.3
Brown, S.4
Golightly, E.5
Halkier, T.6
Kauppinen, S.7
Pederson, A.8
Schneider, P.9
-
60
-
-
0033579474
-
Identification of catalytic residues in glyoxal oxidase by targeted mutagenesis
-
Whittaker M.M., Kersten P.J., Cullen D., Whittaker J.W. Identification of catalytic residues in glyoxal oxidase by targeted mutagenesis. J. Biol. Chem. 1999, 274:36226-36232.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 36226-36232
-
-
Whittaker, M.M.1
Kersten, P.J.2
Cullen, D.3
Whittaker, J.W.4
-
61
-
-
39749177764
-
Identification and analysis of differentially expressed Heterobasidion parviporum genes during natural colonization of Norway spruce stems
-
Yakovlev I.A., Hietala A.M., Steffenrem A., Solheim H., Fossdal C.G. Identification and analysis of differentially expressed Heterobasidion parviporum genes during natural colonization of Norway spruce stems. Fungal Genet. Biol. 2008, 45:498-513.
-
(2008)
Fungal Genet. Biol.
, vol.45
, pp. 498-513
-
-
Yakovlev, I.A.1
Hietala, A.M.2
Steffenrem, A.3
Solheim, H.4
Fossdal, C.G.5
-
62
-
-
44849095141
-
Evidence for cleavage of lignin by a brown rot basidiomycete
-
Yelle D.J., Ralph J., Lu F., Hammel K.E. Evidence for cleavage of lignin by a brown rot basidiomycete. Environ. Microbiol. 2008, 10:1844-1849.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 1844-1849
-
-
Yelle, D.J.1
Ralph, J.2
Lu, F.3
Hammel, K.E.4
|