The genes encoding glycoside hydrolase family 6 and 7 cellulases from the brown-rot fungus Coniophora puteana

Journal of Wood Science

Volumn 55, Issue 5, 2009, Pages 376-380

  Kajisa, Taira ^a   Igarashi, Kiyohiko ^a   Samejima, Masahiro ^a  

^a UNIVERSITY OF TOKYO   (Japan)

Author keywords

Brown rot fungus; Carbohydrate binding modules; Cellulase; Consensus degenerate hybrid oligonucleotide primer (CODEHOP); Glycoside hydrolase family 6 and 7

Indexed keywords

BIODEGRADATION; ENCODING (SYMBOLS); FUNGI; GENES; HYDROLASES; OLIGONUCLEOTIDES; SIGNAL ENCODING; SUGARS;

BROWN ROT FUNGI; CARBOHYDRATE BINDING MODULES; CELLOBIOHYDROLASES; CELLULASE; CONIOPHORA PUTEANA; CONSENSUS DEGENERATE HYBRID OLIGONUCLEOTIDE PRIMER; GENES ENCODING; GLYCOSIDE HYDROLASE FAMILY 6; GLYCOSIDE HYDROLASE FAMILY 6 AND 7; OLIGONUCLEOTIDE PRIMERS;

POLYMERASE CHAIN REACTION;

BASIDIOMYCOTA; CONIOPHORA PUTEANA; FUNGI;

EID: 70350590693     PISSN: 14350211     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10086-009-1042-4     Document Type: Article

References (19)

1. Kirk TK, Adler E (1970) Methoxyl-deficient structural elements in lignin of sweetgum decayed by a brown-rot fungus. Acta Chem Scand 24:3379-3390.
2. Eriksson K-EL, Blanchette RA, Ander P (1990) Microbial and enzymatic degradation of wood and wood components. Springer, Berlin Heidelberg New York.
3. Kim YS, Wi SG, Lee KH, Singh AP (2002) Cytochemical localization of hydrogen peroxide production during wood decay by brown rot fungi Tyromces palustris and Coniophora puteana. Holzforschung 56:7-12.
4. Koenigs JW (1974) Production of hydrogen peroxide by woodrotting fungi in wood and its correlation with weight loss, depolymerizattion and pH changes. Arch Microbiol 99:129-145.
5. Flournoy DS, Kirk TK, Highley TL (1991) Wood decay by brownrot fungi: changes in pore structure and cell wall volume. Holzforschung 45:383-388.
6. Kleman-Leyer K, Agosin E, Conner AH, Kirk TK (1992) Changes in molecular size distribution of cellulose during attack by white rot and brown rot fungi. Appl Environ Microbiol 58:1266-1270.
7. Teeri TT (1997) Crystalline cellulose degradation: new insight into the function of cellobiohydrolases. Trends Biotechnol 15:160-167.
8. Teeri TT, Koivula A, Linder M, Wohlfahrt G, Divne C, Jones TA (1998) Trichoderma reesei cellobiohydrolases: why so effi cient on crystalline cellulose? Biochem Soc Trans 26:173-178.
9. Uzcategui E, Ruiz A, Montersino R, Johansson G, Pettersson G (1991) The 1,4-β-d-glucan cellobiohydrolases from Phanerochaete chrysosporium. I. A system of synergistically acting enzymes homologous to Trichoderma reesei. J Biotechnol 19:271-286.
10. Nilsson T (1974) Comparative study on the cellulolytic activity of white-rot and brown-rot fungi. Mater Org 9:173-198.
11. Schmidhalter DR, Canevascini G (1992) Characterization of the cellulolytic enzyme system from the brown-rot fungus Coniophora puteana. Appl Microbiol Biotechnol 37:431-436.
12. Schmidhalter DR, Canevascini G (1993) Purification and characterization of two exocellobiohydrolases from the brown rot fungus Coniophora puteana (Schum ex Fr.) Karst. Arch Biochem Biophys 300:551-558.
13. Rose TM (2005) CODEHOP-mediated PCR-a powerful technique for the identifi cation and characterization of viral genomes. Virol J 2:20-43.
14. Rose TM, Henikoff JG, Henikoff S (2003) CODEHOP (COnsensus-DEgenerate Hybrid oligonucleotide Primer) PCR primer design. Nucleic Acids Res 31:3763-3766.
15. Rose TM, Schultz ER, Henikoff JG, Pietrokovski S, McCallum CM, Henikoff S (1998) Consensus-degenerate hybrid oligonucleotide primers for amplifi cation of distantly related sequences. Nucleic Acids Res 26:1628-1635.
16. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680.
17. Highley TL (1973) Influence of carbon source on cellulase activity of white-rot and brown-rot fungi. Wood Fiber 5:50-58.
18. Highley TL (1980) Cellulose degradation by cellulose-clearing and non-cellulose-clearing brown-rot fungi. Appl Environ Microbiol 40:1145-1147.
19. Reinikainen T, Ruobonen L, Nevanen T, Laaksonen L, Kraulis P, Jones TA, Knowles JKC, Teeri TT (1992) Investigation of the function of mutated cellulose-binding domain of Trichoderma reesei cellobiohydrolase I. Proteins 14:475-482.