The feeding tube of cyst nematodes: Characterisation of protein exclusion

PLoS ONE

Volumn 9, Issue 1, 2014, Pages

  Eves van Den Akker, Sebastian ^a,b   Lilley, Catherine J ^a   Ault, James R ^a   Ashcroft, Alison E ^a   Jones, John T ^b   Urwin, Peter E ^a  

^a UNIVERSITY OF LEEDS   (United Kingdom)

^b SCOTTISH CROP RESEARCH INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

GREEN FLUORESCENT PROTEIN; HYBRID PROTEIN; PROPIDIUM IODIDE; RED FLUORESCENT PROTEIN;

ARTICLE; CONTROLLED STUDY; CYST NEMATODE; CYST NEMATODE FEEDING TUBE; HOST PARASITE INTERACTION; MASS SPECTROMETRY; MICROBIAL MORPHOLOGY; MOLECULAR SIZE; NEMATODE; NONHUMAN; PARASITE EXAMINATION; PLANT DEFENSE; PREDICTION; PROTEIN DATABASE; PROTEIN ELECTROPHORESIS; PROTEIN EXPRESSION; PROTEIN POLYMORPHISM; PROTEIN TRANSPORT; SPECTROMETRY; TRAVELLING WAVE ION MOBILITY SPECTROMETRY; ULTRACENTRIFUGATION;

ANIMALS; COMPUTATIONAL BIOLOGY; FEEDING BEHAVIOR; MASS SPECTROMETRY; NEMATODA; PLANT PROTEINS;

EID: 84900332488     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0087289     Document Type: Article

References (43)

1. van Megen H, van den Elsen S, Holterman M, Karssen G, Mooyman P, et al. (2009) A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences. Nematology 11: 927-950.
2. Trudgill DL (1997) Parthenogenetic root-knot nematodes (Meloidogyne spp); How can these biotrophic endoparasites have such an enormous host range? Plant Pathology 46: 26-32.
3. Wyss U, Grundler FMW (1992) Feeding-behavior of sedentary plant parasitic nematodes. Netherlands Journal of Plant Pathology 98: 165-173.
4. Sobczak M, Golinowski WA, Grundler FMW (1999) Ultrastructure of feeding plugs and feeding tubes formed by Heterodera schachtii. Nematology 1: 363-374. (Pubitemid 29508812)
5. Rumpenhorst HJ (1984) Intracellular feeding tubes associated with sedentary plant parasitic nematodes. Nematologica 30: 77-85.
6. Hussey RS, Mims CW (1991) Ultrastructure of feeding tubes formed in giantcells induced in plants by the root-knot nematode Meloidogyne incognita. Protoplasma 162: 99-107.
7. Razak AR, Evans AAF (1976) An intracellular tube associated with feeding by Rotylenchulus reniformis on cowpea root. Nematologica 22: 182-189.
8. Urwin PE, Moller SG, Lilley CJ, McPherson MJ, Atkinson HJ (1997) Continual green-fluorescent protein monitoring of cauliflower mosaic virus 35S promoter activity in nematode-induced feeding cells in Arabidopsis thaliana. Molecular Plant-Microbe Interactions 10: 394-400. (Pubitemid 27165142)
9. McCarter J, Gao BL, Bradley J, Hresko MC, Caruano-Yzermans A, et al. (2010) Uptake and exclusion of plant-expressed fluorescent proteins be the soybean cyst nematode Heterodera glycines. Journal of Nematology 42: 256-256.
10. Valentine TA, Randall E, Wypijewski K, Chapman S, Jones J, et al. (2007) Delivery of macromolecules to plant parasitic nematodes using a tobacco rattle virus vector. Plant Biotechnology Journal 5: 827-834. (Pubitemid 47547569)
11. Goverse A, Biesheuvel J, Wijers GJ, Gommers FJ, Bakker J, et al. (1998) In planta monitoring of the activity of two constitutive promoters, CaMV 35S and TR2′, in developing feeding cells induced by Globodera rostochiensis using green fluorescent protein in combination with confocal laser scanning microscopy. Physiological and Molecular Plant Pathology 52: 275-284. (Pubitemid 28367659)
12. Bockenhoff A, Grundler FMW (1994) Studies on the nutrient-uptake by the beet cyst-nematode Heterodera-schachtii by in-situ microinjection of fluorescent-probes into the feeding structures in Arabidopsis-thaliana. Parasitology 109: 249-&.
13. Urwin PE, McPherson MJ, Atkinson HJ (1998) Enhanced transgenic plant resistance to nematodes by dual proteinase inhibitor constructs. Planta 204: 472-479. (Pubitemid 28178527)
14. Mesleh MF, Hunter JM, Shvartsburg AA, Schatz GC, Jarrold MF (1996) Structural information from ion mobility measurements: Effects of the long-range potential. Journal of Physical Chemistry 100: 16082-16086. (Pubitemid 126799343)
15. Giles K, Pringle SD, Worthington KR, Little D, Wildgoose JL, et al. (2004) Applications of a travelling wave-based radio-frequencyonly stacked ring ion guide. Rapid Communications in Mass Spectrometry 18: 2401-2414. (Pubitemid 39361780)
16. Pringle SD, Giles K, Wildgoose JL, Williams JP, Slade SE, et al. (2007) An investigation of the mobility separation of some peptide and protein ions using a new hybrid quadrupole/travelling wave IMS/oa-ToF instrument. International Journal of Mass Spectrometry 261: 1-12.
17. Mack E (1925) Average cross-sectional areas of molecules by gaseous diffusion methods. Journal of the American Chemical Society 47: 2468-2482.
18. Smith DP, Knapman TW, Campuzano I, Malham RW, Berryman JT, et al. (2009) Deciphering drift time measurements from travelling wave ion mobility spectrometry-mass spectrometry studies. European Journal of Mass Spectrometry 15: 113-130.
19. Shvartsburg AA, Mashkevich SV, Baker ES, Smith RD (2007) Optimization of algorithms for ion mobility calculations. Journal of Physical Chemistry A 111: 2002-2010. (Pubitemid 46543256)
20. Shvartsburg AA, Jarrold MF (1996) An exact hard-spheres scattering model for the mobilities of polyatomic ions. Chemical Physics Letters 261: 86-91. (Pubitemid 126163393)
21. Clemmer DE, Jarrold MF (1997) Ion mobility measurements and their applications to clusters and biomolecules. Journal of Mass Spectrometry 32: 577-592. (Pubitemid 27273948)
22. Hogan CJJ, Ruotolo BT, Robinson CV, de la Mora JF (2011) Tandem differential mobility analysis-mass spectrometry reveals partial gas-phase collapse of the GroEL complex. Journal of Physical Chemistry B 115: 3614-3621.
23. Shelimov KB, Clemmer DE, Hudgins RR, Jarrold MF (1997) Protein structure in vacuo: Gas-phase confirmations of BPTI and cytochrome c. Journal of the American Chemical Society 119: 2240-2248. (Pubitemid 27159991)
24. Jurneczko E, Barran PE (2011) How useful is ion mobility mass spectrometry for structural biology? The relationship between protein crystal structures and their collision cross sections in the gas phase. Analyst 136: 20-28.
25. van Duijn E, Barendregt A, Synowsky S, Versluis C, Heck AJR (2009) Chaperonin complexes monitored by ion mobility mass spectrometry. Journal of the American Chemical Society 131: 1452-1459.
26. Lebowitz J, Lewis MS, Schuck P (2002) Modern analytical ultracentrifugation in protein science: A tutorial review. Protein Science 11: 2067-2079. (Pubitemid 34919611)
27. Shvartsburg AA, Schatz GC, Jarrold MF (1998) Mobilities of carbon cluster ions: Critical importance of the molecular attractive potential. Journal of Chemical Physics 108: 2416-2423. (Pubitemid 128604702)
28. Valentine SJ, Anderson JG, Ellington AD, Clemmer DE (1997) Disulfide-intact and -reduced lysozyme in the gas phase: Conformations and pathways of folding and unfolding. Journal of Physical Chemistry B 101: 3891-3900. (Pubitemid 127581147)
29. Hopper JTS, Oldham NJ (2009) Collision induced unfolding of protein ions in the gas phase studied by ion mobility-mass spectrometry: The effect of ligand binding on conformational stability. Journal of the American Society for Mass Spectrometry 20: 1851-1858.
30. Woods LA, Platt GW, Hellewell AL, Hewitt EW, Homans SW, et al. (2011) Ligand binding to distinct states diverts aggregation of an amyloid-forming protein. Nature Chemical Biology 7: 730-739.
31. Treuheit MJ, Kosky AA, Brems DN (2002) Inverse relationship of protein concentration and aggregation. Pharmaceutical Research 19: 511-516. (Pubitemid 34408953)
32. Fields GB, Alonso DOV, Stigter D, Dill KA (1992) Theory for the aggregation of proteins and copolymers. Journal of Physical Chemistry 96: 3974-3981.
33. Zacharias DA, Violin JD, Newton AC, Tsien RY (2002) Partitioning of lipid-modified monomeric GFPs into membrane microdomains of live cells. Science 296: 913-916. (Pubitemid 34464897)
34. Roberts CJ (2007) Non-native protein aggregation kinetics. Biotechnology and Bioengineering 98: 927-938.
35. Raso SW, Abel J, Barnes JM, Maloney KM, Pipes G, et al. (2005) Aggregation of granulocyte-colony stimulating factor in vitro involves a conformationally altered monomeric state. Protein Science 14: 2246-2257. (Pubitemid 41252793)
36. Kiese S, Papppenberger A, Friess W, Mahler HC (2008) Shaken, not stirred: Mechanical stress testing of an IgG1 antibody. Journal of Pharmaceutical Sciences 97: 4347-4366.
37. Carpenter JF, Kendrick BS, Chang BS, Manning MC, Randolph TW (1999) Inhibition of stress-induced aggregation of protein therapeutics. Amyloid, Prions, and Other Protein Aggregates 309: 236-255. (Pubitemid 29446453)
38. Cellmer T, Bratko D, Prausnitz JM, Blanch HW (2007) Protein aggregation in silico. Trends in Biotechnology 25: 254-261. (Pubitemid 46755407)
39. Rutschow HL, Baskin TI, Kramer EM (2011) Regulation of solute flux through plasmodesmata in the root meristem. Plant Physiology 155: 1817-1826.
40. Terry BR, Robards AW (1987) Hydrodynamic radius alone governs the mobility of molecules through plasmodesmata. Planta 171: 145-157.
41. Edwards A, Daniels BS, Deen WM (1999) Ultrastructural model for size selectivity in glomerular filtration. American Journal of Physiology-Renal Physiology 276: F892-F902. (Pubitemid 29323563)
42. Guasch A, Deen WM, Myers BD (1993) Charge selectivity of the glomerular-filtration barrier in healthy and nephrotic humans. Journal of Clinical Investigation 92: 2274-2282. (Pubitemid 23333533)
43. Tencer J, Frick IM, Oquist BW, Alm P, Rippe B (1998) Size-selectivity of the glomerular barrier to high molecular weight proteins: Upper size limitations of shunt pathways. Kidney International 53: 709-715. (Pubitemid 28124287)