메뉴 건너뛰기




Volumn 9, Issue 4, 2014, Pages 497-507

Elucidating the function of the RpoS regulon

Author keywords

adaptation; evolution; gene regulation; persistence; regulon; starvation; stationary phase; stress; viable but not culturable

Indexed keywords

PROTEIN; RNA; SIGMA FACTOR RPOS; VIRULENCE FACTOR; BACTERIAL PROTEIN; SIGMA FACTOR; SIGMA FACTOR KATF PROTEIN, BACTERIA;

EID: 84900310041     PISSN: 17460913     EISSN: 17460921     Source Type: Journal    
DOI: 10.2217/fmb.14.9     Document Type: Review
Times cited : (51)

References (83)
  • 1
    • 71749093772 scopus 로고    scopus 로고
    • Proteolysis of sigmas (rpos) and the general stress response in escherichia coli
    • Hengge R. Proteolysis of sigmaS (RpoS) and the general stress response in Escherichia coli. Res. Microbiol. 160(9), 667-676 (2009).
    • (2009) Res. Microbiol , vol.160 , Issue.9 , pp. 667-676
    • Hengge, R.1
  • 2
    • 80053226878 scopus 로고    scopus 로고
    • The rpos-mediated general stress response in escherichia coli
    • Battesti A, Majdalani N, Gottesman S. The RpoS-mediated general stress response in Escherichia coli. Annu. Rev. Microbiol. 65, 189-213 (2011).
    • Annu. Rev. Microbiol , vol.65 , Issue.2011 , pp. 189-213
    • Battesti, A.1    Majdalani, N.2    Gottesman, S.3
  • 3
    • 77954421693 scopus 로고    scopus 로고
    • Evolution of the rpos regulon: Origin of rpos and the conservation of rpos-dependent regulation in bacteria
    • Chiang SM, Schellhorn HE. Evolution of the RpoS regulon: origin of RpoS and the conservation of RpoS-dependent regulation in bacteria. J. Mol. Evol. 70(6), 557-571 (2010).
    • (2010) J. Mol. Evol , vol.70 , Issue.6 , pp. 557-571
    • Chiang, S.M.1    Schellhorn, H.E.2
  • 4
    • 0037261948 scopus 로고    scopus 로고
    • The sigma70 family of sigma factors
    • Paget MS, Helmann JD. The sigma70 family of sigma factors. Genome Biol. 4(1), 203 (2003).
    • (2003) Genome Biol , vol.4 , Issue.1 , pp. 203
    • Paget, M.S.1    Helmann, J.D.2
  • 6
    • 6044228192 scopus 로고    scopus 로고
    • SigmaS-dependent gene expression at the onset of stationary phase in escherichia coli: Function of sigmas-dependent genes and identification of their promoter sequences
    • Lacour S, Landini P. SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences. J. Bacteriol. 186(21), 7186-7195 (2004).
    • (2004) J. Bacteriol , vol.186 , Issue.21 , pp. 7186-7195
    • Lacour, S.1    Landini, P.2
  • 7
    • 14244256556 scopus 로고    scopus 로고
    • Genome-wide analysis of the general stress response network in escherichia coli: Sigmas-dependent genes, promoters, and sigma factor selectivity
    • Weber H, Polen T, Heuveling J, Wendisch VF, Hengge R. Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. J. Bacteriol. 187(5), 1591-1603 (2005).
    • (2005) J. Bacteriol , vol.187 , Issue.5 , pp. 1591-1603
    • Weber, H.1    Polen, T.2    Heuveling, J.3    Wendisch, V.F.4    Hengge, R.5
  • 8
    • 69249146924 scopus 로고    scopus 로고
    • Global effect of rpos on gene expression in pathogenic escherichia coli o157:H7 strain edl933
    • Dong T, Schellhorn HE. Global effect of RpoS on gene expression in pathogenic Escherichia coli O157:H7 strain EDL933. BMC Genomics 10, 349 (2009).
    • (2009) BMC Genomics , vol.10 , pp. 349
    • Dong, T.1    Schellhorn, H.E.2
  • 9
    • 24044489239 scopus 로고    scopus 로고
    • The global transcriptional response of escherichia coli to induced sigma 32 protein involves sigma 32 regulon activation followed by inactivation and degradation of sigma 32 in vivo
    • Zhao K, Liu M, Burgess RR. The global transcriptional response of Escherichia coli to induced sigma 32 protein involves sigma 32 regulon activation followed by inactivation and degradation of sigma 32 in vivo. J. Biol. Chem. 280(18), 17758-17768 (2005).
    • (2005) J. Biol. Chem , vol.280 , Issue.18 , pp. 17758-17768
    • Zhao, K.1    Liu, M.2    Burgess, R.R.3
  • 10
    • 0033985495 scopus 로고    scopus 로고
    • Two extracytoplasmic function sigma subunits, sigma(e) and sigma(fecI), of escherichia coli: Promoter selectivity and intracellular levels
    • Maeda H, Jishage M, Nomura T, Fujita N, Ishihama A. Two extracytoplasmic function sigma subunits, sigma(E) and sigma(FecI), of Escherichia coli: promoter selectivity and intracellular levels. J. Bacteriol. 182(4), 1181-1184 (2000).
    • (2000) J. Bacteriol , vol.182 , Issue.4 , pp. 1181-1184
    • Maeda, H.1    Jishage, M.2    Nomura, T.3    Fujita, N.4    Ishihama, A.5
  • 11
    • 0035877593 scopus 로고    scopus 로고
    • Characterization of the escherichia coli sigma e regulon
    • Dartigalongue C, Missiakas D, Raina S. Characterization of the Escherichia coli sigma E regulon. J. Biol. Chem. 276(24), 20866-20875 (2001).
    • (2001) J. Biol. Chem , vol.276 , Issue.24 , pp. 20866-20875
    • Dartigalongue, C.1    Missiakas, D.2    Raina, S.3
  • 12
    • 77950344767 scopus 로고    scopus 로고
    • Promoter and regulon analysis of nitrogen assimilation factor, sigma54, reveal alternative strategy for e. Coli mg1655 flagellar biosynthesis
    • Zhao K, Liu M, Burgess RR. Promoter and regulon analysis of nitrogen assimilation factor, sigma54, reveal alternative strategy for E. coli MG1655 flagellar biosynthesis. Nucleic Acids Res. 38(4), 1273-1283 (2010).
    • (2010) Nucleic Acids Res , vol.38 , Issue.4 , pp. 1273-1283
    • Zhao, K.1    Liu, M.2    Burgess, R.R.3
  • 13
    • 78651086262 scopus 로고    scopus 로고
    • Antagonistic regulation of motility and transcriptome expression by rpon and rpos in escherichia coli
    • Dong T, Yu R, Schellhorn H. Antagonistic regulation of motility and transcriptome expression by RpoN and RpoS in Escherichia coli. Mol. Microbiol. 79(2), 375-386 (2011).
    • (2011) Mol. Microbiol , vol.79 , Issue.2 , pp. 375-386
    • Dong, T.1    Yu, R.2    Schellhorn, H.3
  • 14
    • 34547851781 scopus 로고    scopus 로고
    • Adaptation in bacterial flagellar and motility systems: From regulon members to 'foraging'-like behavior in e. Coli
    • Zhao K, Liu M, Burgess RR. Adaptation in bacterial flagellar and motility systems: from regulon members to 'foraging'-like behavior in E. coli. Nucleic Acids Res. 35(13), 4441-4452 (2007).
    • (2007) Nucleic Acids Res , vol.35 , Issue.13 , pp. 4441-4452
    • Zhao, K.1    Liu, M.2    Burgess, R.R.3
  • 15
    • 0026020230 scopus 로고
    • Identification of a central regulator of stationary-phase gene expression in escherichia coli
    • Lange R, Hengge-Aronis R. Identification of a central regulator of stationary-phase gene expression in Escherichia coli. Mol. Microbiol. 5(1), 49-59 (1991).
    • (1991) Mol. Microbiol , vol.5 , Issue.1 , pp. 49-59
    • Lange, R.1    Hengge-Aronis, R.2
  • 16
    • 0026330981 scopus 로고
    • Trehalose synthesis genes are controlled by the putative sigma factor encoded by rpos and are involved in stationary-phase thermotolerance in escherichia coli
    • Hengge-Aronis R, Klein W, Lange R, Rimmele M, Boos W. Trehalose synthesis genes are controlled by the putative sigma factor encoded by rpoS and are involved in stationary-phase thermotolerance in Escherichia coli. J. Bacteriol. 173(24), 7918-7924 (1991).
    • (1991) J. Bacteriol , vol.173 , Issue.24 , pp. 7918-7924
    • Hengge-Aronis, R.1    Klein, W.2    Lange, R.3    Rimmele, M.4    Boos, W.5
  • 17
    • 0028324804 scopus 로고
    • Acid and base resistance in escherichia coli and shigella flexneri: Role of rpos and growth ph
    • Small P, Blankenhorn D, Welty D, Zinser E, Slonczewski JL. Acid and base resistance in Escherichia coli and Shigella flexneri: role of rpoS and growth pH. J. Bacteriol. 176(6), 1729-1737 (1994).
    • (1994) J. Bacteriol , vol.176 , Issue.6 , pp. 1729-1737
    • Small, P.1    Blankenhorn, D.2    Welty, D.3    Zinser, E.4    Slonczewski, J.L.5
  • 18
    • 0022556268 scopus 로고
    • Control of sensitivity to inactivation by H2o2 and broad-spectrum near-uv radiation by the escherichia coli katf locus
    • Sammartano LJ, Tuveson RW, Davenport R. Control of sensitivity to inactivation by H2O2 and broad-spectrum near-UV radiation by the Escherichia coli katF locus. J. Bacteriol. 168(1), 13-21 (1986).
    • (1986) J. Bacteriol , vol.168 , Issue.1 , pp. 13-21
    • Sammartano, L.J.1    Tuveson, R.W.2    Davenport, R.3
  • 20
    • 0033543618 scopus 로고    scopus 로고
    • Oxidative stress defense and deterioration of growth-arrested escherichia coli cells
    • Dukan S, Nystrom T. Oxidative stress defense and deterioration of growth-arrested Escherichia coli cells. J. Biol. Chem. 274(37), 26027-26032 (1999).
    • (1999) J. Biol. Chem , vol.274 , Issue.37 , pp. 26027-26032
    • Dukan, S.1    Nystrom, T.2
  • 21
    • 0142062024 scopus 로고    scopus 로고
    • Error-prone dna polymerase iv is controlled by the stress-response sigma factor, rpos, in escherichia coli
    • Layton JC, Foster PL. Error-prone DNA polymerase IV is controlled by the stress-response sigma factor, RpoS, in Escherichia coli. Mol. Microbiol. 50(2), 549-561 (2003).
    • (2003) Mol. Microbiol , vol.50 , Issue.2 , pp. 549-561
    • Layton, J.C.1    Foster, P.L.2
  • 22
    • 77954417926 scopus 로고    scopus 로고
    • Rpos, the stress response sigma factor, plays a dual role in the regulation of escherichia coli's error-prone dna polymerase iv
    • Storvik KA, Foster PL. RpoS, the stress response sigma factor, plays a dual role in the regulation of Escherichia coli's error-prone DNA polymerase IV. J. Bacteriol. 192(14), 3639-3644 (2010).
    • (2010) J. Bacteriol , vol.192 , Issue.14 , pp. 3639-3644
    • Storvik, K.A.1    Foster, P.L.2
  • 23
    • 0028106775 scopus 로고
    • The nlpd gene is located in an operon with rpos on the escherichia coli chromosome and encodes a novel lipoprotein with a potential function in cell wall formation
    • Lange R, Hengge-Aronis R. The nlpD gene is located in an operon with rpoS on the Escherichia coli chromosome and encodes a novel lipoprotein with a potential function in cell wall formation. Mol. Microbiol. 13(4), 733-743 (1994).
    • (1994) Mol. Microbiol , vol.13 , Issue.4 , pp. 733-743
    • Lange, R.1    Hengge-Aronis, R.2
  • 24
    • 0028176450 scopus 로고
    • The cellular concentration of the sigma s subunit of rna polymerase in escherichia coli is controlled at the levels of transcription, translation, and protein stability
    • Lange R, Hengge-Aronis R. The cellular concentration of the sigma S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability. Genes Dev. 8(13), 1600-1612 (1994).
    • (1994) Genes Dev , vol.8 , Issue.13 , pp. 1600-1612
    • Lange, R.1    Hengge-Aronis, R.2
  • 25
    • 0031756183 scopus 로고    scopus 로고
    • Identification of conserved, rpos-dependent stationary-phase genes of escherichia coli
    • Schellhorn HE, Audia JP, Wei LI, Chang L. Identification of conserved, RpoS-dependent stationary-phase genes of Escherichia coli. J. Bacteriol. 180(23), 6283-6291 (1998).
    • (1998) J. Bacteriol , vol.180 , Issue.23 , pp. 6283-6291
    • Schellhorn, H.E.1    Audia, J.P.2    Wei, L.I.3    Chang, L.4
  • 26
    • 0028787734 scopus 로고
    • Regulation of rna polymerase sigma subunit synthesis in escherichia coli: Intracellular levels of sigma 70 and sigma 38
    • Jishage M, Ishihama A. Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of sigma 70 and sigma 38. J. Bacteriol. 177(23), 6832-6835 (1995).
    • (1995) J. Bacteriol , vol.177 , Issue.23 , pp. 6832-6835
    • Jishage, M.1    Ishihama, A.2
  • 27
    • 0032703638 scopus 로고    scopus 로고
    • Expression of the escherichia coli nrz nitrate reductase is highly growth phase dependent and is controlled by rpos, the alternative vegetative sigma factor
    • Chang L, Wei LI, Audia JP, Morton RA, Schellhorn HE, Expression of the escherichia coli nrz nitrate reductase is highly growth phase dependent and is controlled by rpos, the alternative vegetative sigma factor. Mol. Microbiol.34.4.756-766.1999.
    • (1999) Mol. Microbiol , vol.34 , Issue.4 , pp. 756-766
    • Chang, L.1    Wei, L.I.2    Audia, J.P.3    Morton, R.A.4    Schellhorn, H.E.5
  • 28
    • 0032744664 scopus 로고    scopus 로고
    • The rpos-dependent starvation-stress response locus stia encodes a nitrate reductase (narzywv) required for carbon-starvation-inducible thermotolerance and acid tolerance in salmonella typhimurium
    • Spector MP, Garcia Del Portillo F, Bearson SM et al. The rpoS-dependent starvation-stress response locus stiA encodes a nitrate reductase (narZYWV) required for carbon-starvation-inducible thermotolerance and acid tolerance in Salmonella typhimurium. Microbiology 145(Pt 11), 3035-3045 (1999).
    • (1999) Microbiology , vol.145 PART 11 , pp. 3035-3045
    • Spector, M.P.1    Garcia Del Portillo, F.2    Bearson, S.M.3
  • 29
    • 33846947959 scopus 로고    scopus 로고
    • The molecular basis of selective promoter activation by the sigmas subunit of rna polymerase
    • Typas A, Becker G, Hengge R. The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase. Mol. Microbiol. 63(5), 1296-1306 (2007).
    • (2007) Mol. Microbiol , vol.63 , Issue.5 , pp. 1296-1306
    • Typas, A.1    Becker, G.2    Hengge, R.3
  • 30
    • 33846262416 scopus 로고    scopus 로고
    • The -35 sequence location and the fis-sigma factor interface determine sigmas selectivity of the prop (p2) promoter in escherichia coli
    • Typas A, Stella S, Johnson RC, Hengge R. The -35 sequence location and the Fis-sigma factor interface determine sigmas selectivity of the proP (P2) promoter in Escherichia coli. Mol. Microbiol. 63(3), 780-796 (2007).
    • (2007) Mol. Microbiol , vol.63 , Issue.3 , pp. 780-796
    • Typas, A.1    Stella, S.2    Johnson, R.C.3    Hengge, R.4
  • 31
    • 80052213074 scopus 로고    scopus 로고
    • In vitro transcription profiling of the sigma(s) subunit of bacterial rna polymerase: Re-definition of the sigma(s) regulon and identification of sigma(s)-specific promoter sequence elements
    • Maciag A, Peano C, Pietrelli A, Egli T, De Bellis G, Landini P. In vitro transcription profiling of the Sigma(S) subunit of bacterial RNA polymerase: re-definition of the Sigma(S) regulon and identification of Sigma(S)-specific promoter sequence elements. Nucleic Acids Res. 39(13), 5338-5355 (2011).
    • (2011) Nucleic Acids Res , vol.39 , Issue.13 , pp. 5338-5355
    • Maciag, A.1    Peano, C.2    Pietrelli, A.3    Egli, T.4    De Bellis, G.5    Landini, P.6
  • 32
    • 39249084651 scopus 로고    scopus 로고
    • RpoS regulation of gene expression during exponential growth of escherichia coli k12
    • Dong T, Kirchhof MG, Schellhorn HE. RpoS regulation of gene expression during exponential growth of Escherichia coli K12. Mol. Genet. Genomics 279(3), 267-277 (2008).
    • (2008) Mol. Genet. Genomics , vol.279 , Issue.3 , pp. 267-277
    • Dong, T.1    Kirchhof, M.G.2    Schellhorn, H.E.3
  • 33
    • 33745210122 scopus 로고    scopus 로고
    • Effect of rpos gene knockout on the metabolism of escherichia coli during exponential growth phase and early stationary phase based on gene expressions, enzyme activities and intracellular metabolite concentrations
    • Rahman M, Hasan MR, Oba T, Shimizu K. Effect of rpoS gene knockout on the metabolism of Escherichia coli during exponential growth phase and early stationary phase based on gene expressions, enzyme activities and intracellular metabolite concentrations. Biotechnol. Bioeng. 94(3), 585-595 (2006).
    • (2006) Biotechnol. Bioeng , vol.94 , Issue.3 , pp. 585-595
    • Rahman, M.1    Hasan, M.R.2    Oba, T.3    Shimizu, K.4
  • 34
    • 0027475041 scopus 로고
    • The rpos sigma factor relieves h-ns-mediated transcriptional repression of csga, the subunit gene of fibronectin-binding curli in escherichia coli
    • Olsen A, Arnqvist A, Hammar M, Sukupolvi S, Normark S. The RpoS sigma factor relieves H-NS-mediated transcriptional repression of csgA, the subunit gene of fibronectin-binding curli in Escherichia coli. Mol. Microbiol. 7(4), 523-536 (1993).
    • (1993) Mol. Microbiol , vol.7 , Issue.4 , pp. 523-536
    • Olsen, A.1    Arnqvist, A.2    Hammar, M.3    Sukupolvi, S.4    Normark, S.5
  • 35
    • 33947608392 scopus 로고    scopus 로고
    • Stationary phase reorganisation of the escherichia coli transcription machinery by crl protein, a fine-tuner of sigmas activity and levels
    • Typas A, Barembruch C, Possling A, Hengge R. Stationary phase reorganisation of the Escherichia coli transcription machinery by Crl protein, a fine-tuner of sigmas activity and levels. EMBO J. 26(6), 1569-1578 (2007).
    • (2007) EMBO J , vol.26 , Issue.6 , pp. 1569-1578
    • Typas, A.1    Barembruch, C.2    Possling, A.3    Hengge, R.4
  • 36
    • 84885079050 scopus 로고    scopus 로고
    • Key features of sigmas required for specific recognition by crl, a transcription factor promoting assembly of rna polymerase holoenzyme
    • Banta AB, Chumanov RS, Yuan AH et al. Key features of sigmaS required for specific recognition by Crl, a transcription factor promoting assembly of RNA polymerase holoenzyme. Proc. Natl Acad. Sci. USA 110(40), 6 (2013).
    • (2013) Proc. Natl Acad. Sci. USA , vol.110 , Issue.40 , pp. 6
    • Banta, A.B.1    Chumanov, R.S.2    Yuan, A.H.3
  • 37
    • 84883624748 scopus 로고    scopus 로고
    • Expression dynamics of rpos/Crl-dependent genes in escherichia coli
    • Dudin O, Lacour S, Geiselmann J. Expression dynamics of RpoS/Crl-dependent genes in Escherichia coli. Res. Microbiol. 164(8), 838-847 (2013).
    • (2013) Res. Microbiol , vol.164 , Issue.8 , pp. 838-847
    • Dudin, O.1    Lacour, S.2    Geiselmann, J.3
  • 38
    • 84871176912 scopus 로고    scopus 로고
    • Growth and survival parameter estimates and relation to rpos levels in serotype o157:H7 and non-o157 shiga toxin-producing escherichia coli
    • Mand TD, Dopfer D, Ingham B, Ane C, Kaspar CW. Growth and survival parameter estimates and relation to RpoS levels in serotype O157:H7 and non-O157 Shiga toxin-producing Escherichia coli. J. Appl. Microbiol. 114(1), 242-255 (2013).
    • (2013) J. Appl. Microbiol , vol.114 , Issue.1 , pp. 242-255
    • Mand, T.D.1    Dopfer, D.2    Ingham, B.3    Ane, C.4    Kaspar, C.W.5
  • 39
    • 84881243295 scopus 로고    scopus 로고
    • Phage insertion in mlra and variations in rpos limit curli expression and biofilm formation in escherichia coli serotype o157:H7
    • Uhlich GA, Chen CY, Cottrell BJ et al. Phage insertion in mlrA and variations in rpoS limit curli expression and biofilm formation in Escherichia coli serotype O157:H7. Microbiology 159(Pt 8), 1586-1596 (2013).
    • (2013) Microbiology , vol.159 PART , Issue.8 , pp. 1586-1596
    • Uhlich, G.A.1    Chen, C.Y.2    Cottrell, B.J.3
  • 40
    • 0027966054 scopus 로고
    • RpoS is necessary for both the positive and negative regulation of starvation survival genes during phosphate, carbon, and nitrogen starvation in salmonella typhimurium
    • O'Neal CR, Gabriel WM, Turk AK, Libby SJ, Fang FC, Spector MP. RpoS is necessary for both the positive and negative regulation of starvation survival genes during phosphate, carbon, and nitrogen starvation in Salmonella typhimurium. J. Bacteriol. 176(15), 4610-4616 (1994).
    • (1994) J. Bacteriol , vol.176 , Issue.15 , pp. 4610-4616
    • O'Neal, C.R.1    Gabriel, W.M.2    Turk, A.K.3    Libby, S.J.4    Fang, F.C.5    Spector, M.P.6
  • 41
    • 0030711638 scopus 로고    scopus 로고
    • Negative regulation of muts and muth repair gene expression by the hfq and rpos global regulators of escherichia coli k-12
    • Tsui HC, Feng G, Winkler ME. Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12. J. Bacteriol. 179(23), 7476-7487 (1997).
    • (1997) J. Bacteriol , vol.179 , Issue.23 , pp. 7476-7487
    • Tsui, H.C.1    Feng, G.2    Winkler, M.E.3
  • 42
    • 84879620270 scopus 로고    scopus 로고
    • Genome-scale analysis of escherichia coli fnr reveals complex features of transcription factor binding
    • Myers KS, Yan H, Ong IM et al. Genome-scale analysis of Escherichia coli FNR reveals complex features of transcription factor binding. PLoS Genet. 9(6), e1003565 (2013).
    • (2013) PLoS Genet , vol.9 , Issue.6
    • Myers, K.S.1    Yan, H.2    Ong, I.M.3
  • 43
    • 0033955942 scopus 로고    scopus 로고
    • Comparative genome analysis of the pathogenic spirochetes borrelia burgdorferi and treponema pallidum
    • Subramanian G, Koonin EV, Aravind L. Comparative genome analysis of the pathogenic spirochetes Borrelia burgdorferi and Treponema pallidum. Infect. Immun. 68(3), 1633-1648 (2000).
    • (2000) Infect. Immun , vol.68 , Issue.3 , pp. 1633-1648
    • Subramanian, G.1    Koonin, E.V.2    Aravind, L.3
  • 44
    • 3843061164 scopus 로고    scopus 로고
    • The rpos sigma factor in the dissimilatory fe(iii)-reducing bacterium geobacter sulfurreducens
    • Nunez C, Adams L, Childers S, Lovley DR. The RpoS sigma factor in the dissimilatory Fe(III)-reducing bacterium Geobacter sulfurreducens. J. Bacteriol. 186(16), 5543-5546 (2004).
    • (2004) J. Bacteriol , vol.186 , Issue.16 , pp. 5543-5546
    • Nunez, C.1    Adams, L.2    Childers, S.3    Lovley, D.R.4
  • 45
    • 0031028408 scopus 로고    scopus 로고
    • Variation in rna polymerase sigma subunit composition within different stocks of escherichia coli w3110
    • Jishage M, Ishihama A. Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli W3110. J. Bacteriol. 179(3), 959-963 (1997).
    • (1997) J. Bacteriol , vol.179 , Issue.3 , pp. 959-963
    • Jishage, M.1    Ishihama, A.2
  • 46
    • 67549090009 scopus 로고    scopus 로고
    • Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of escherichia coli K-12
    • Ferenci T, Zhou Z, Betteridge T et al. Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12. J. Bacteriol. 191(12), 4025-4029 (2009).
    • (2009) J. Bacteriol , vol.191 , Issue.12 , pp. 4025-4029
    • Ferenci, T.1    Zhou, Z.2    Betteridge, T.3
  • 47
    • 80455126043 scopus 로고    scopus 로고
    • The uncertain consequences of transferring bacterial strains between laboratories - Rpos instability as an example
    • Spira B, De Almeida Toledo R, Maharjan RP, Ferenci T. The uncertain consequences of transferring bacterial strains between laboratories - rpoS instability as an example. BMC Microbiol. 11, 248 (2011).
    • BMC Microbiol , vol.11 , Issue.2011 , pp. 248
    • Spira, B.1    De Almeida Toledo, R.2    Maharjan, R.P.3    Ferenci, T.4
  • 49
    • 83055180134 scopus 로고    scopus 로고
    • Phenotypic diversity caused by differential rpos activity among environmental escherichia coli isolates
    • Chiang SM, Dong T, Edge TA, Schellhorn HE. Phenotypic diversity caused by differential RpoS activity among environmental Escherichia coli isolates. Appl. Environ. Microbiol. 77(22), 7915-7923 (2011).
    • (2011) Appl. Environ. Microbiol , vol.77 , Issue.22 , pp. 7915-7923
    • Chiang, S.M.1    Dong, T.2    Edge, T.A.3    Schellhorn, H.E.4
  • 50
    • 31544474634 scopus 로고    scopus 로고
    • Long-term survival during stationary phase: Evolution and the gasp phenotype
    • Finkel SE. Long-term survival during stationary phase: evolution and the GASP phenotype. Nat. Rev. Microbiol. 4(2), 113-120 (2006).
    • (2006) Nat. Rev. Microbiol , vol.4 , Issue.2 , pp. 113-120
    • Finkel, S.E.1
  • 51
    • 4344633752 scopus 로고    scopus 로고
    • A regulatory trade-off as a source of strain variation in the species escherichia coli
    • King T, Ishihama A, Kori A, Ferenci T. A regulatory trade-off as a source of strain variation in the species Escherichia coli. J. Bacteriol. 186(17), 5614-5620 (2004).
    • (2004) J. Bacteriol , vol.186 , Issue.17 , pp. 5614-5620
    • King, T.1    Ishihama, A.2    Kori, A.3    Ferenci, T.4
  • 52
    • 84884669749 scopus 로고    scopus 로고
    • A design-constraint trade-off underpins the diversity in ecologically important traits in species escherichia coli
    • Phan K, Ferenci T. A design-constraint trade-off underpins the diversity in ecologically important traits in species Escherichia coli. ISME J. 7(10), 2034-2043 (2013).
    • (2013) ISME J , vol.7 , Issue.10 , pp. 2034-2043
    • Phan, K.1    Ferenci, T.2
  • 54
    • 4344634337 scopus 로고    scopus 로고
    • Positive selection for loss of rpos function in escherichia coli
    • Chen G, Patten CL, Schellhorn HE. Positive selection for loss of RpoS function in Escherichia coli. Mutat. Res. 554(1-2), 193-203 (2004).
    • (2004) Mutat. Res , vol.554 , Issue.1-2 , pp. 193-203
    • Chen, G.1    Patten, C.L.2    Schellhorn, H.E.3
  • 55
    • 84874801080 scopus 로고    scopus 로고
    • Selection for loss of rpos in cronobacter sakazakii by growth in the presence of acetate as a carbon source
    • Alvarez-Ordonez A, Begley M, Hill C. Selection for loss of RpoS in Cronobacter sakazakii by growth in the presence of acetate as a carbon source. Appl. Environ. Microbiol. 79(6), 2099-2102 (2013).
    • (2013) Appl. Environ. Microbiol , vol.79 , Issue.6 , pp. 2099-2102
    • Alvarez-Ordonez, A.1    Begley, M.2    Hill, C.3
  • 56
    • 84894691418 scopus 로고    scopus 로고
    • The nature of laboratory domestication changes in freshly isolated escherichia coli strains
    • Eydallin G, Ryall B, Maharjan R, Ferenci T. The nature of laboratory domestication changes in freshly isolated Escherichia coli strains. Environ. Microbiol. 16(3), 813-828 (2013).
    • (2013) Environ. Microbiol , vol.16 , Issue.3 , pp. 813-828
    • Eydallin, G.1    Ryall, B.2    Maharjan, R.3    Ferenci, T.4
  • 57
    • 0035205423 scopus 로고    scopus 로고
    • Complex regulatory network controls initial adhesion and biofilm formation in escherichia coli via regulation of the csgd gene
    • Prigent-Combaret C, Brombacher E, Vidal O et al. Complex regulatory network controls initial adhesion and biofilm formation in Escherichia coli via regulation of the csgD gene. J. Bacteriol. 183(24), 7213-7223 (2001).
    • (2001) J. Bacteriol , vol.183 , Issue.24 , pp. 7213-7223
    • Prigent-Combaret, C.1    Brombacher, E.2    Vidal, O.3
  • 58
    • 84858863122 scopus 로고    scopus 로고
    • Targeting of csgd by the small regulatory rna rpra links stationary phase, biofilm formation and cell envelope stress in escherichia coli
    • Mika F, Busse S, Possling A et al. Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coli. Mol. Microbiol. 84(1), 51-65 (2012).
    • (2012) Mol. Microbiol , vol.84 , Issue.1 , pp. 51-65
    • Mika, F.1    Busse, S.2    Possling, A.3
  • 59
    • 0037150041 scopus 로고    scopus 로고
    • A mutation in rpos enhances biofilm formation in escherichia coli during exponential phase of growth
    • Corona-Izquierdo FP, Membrillo-Hernandez J. A mutation in rpoS enhances biofilm formation in Escherichia coli during exponential phase of growth. FEMS Microbiol. Lett. 211(1), 105-110 (2002).
    • (2002) FEMS Microbiol. Lett , vol.211 , Issue.1 , pp. 105-110
    • Corona-Izquierdo, F.P.1    Membrillo-Hernandez, J.2
  • 61
    • 0032851954 scopus 로고    scopus 로고
    • Impact of rpos deletion on escherichia coli biofilms
    • Adams JL, Mclean RJ. Impact of rpoS deletion on Escherichia coli biofilms. Appl. Environ. Microbiol. 65(9), 4285-4287 (1999).
    • (1999) Appl. Environ. Microbiol , vol.65 , Issue.9 , pp. 4285-4287
    • Adams, J.L.1    McLean, R.J.2
  • 62
    • 58149383896 scopus 로고    scopus 로고
    • Impact of rpos deletion on the proteome of escherichia coli grown planktonically and as biofilm
    • Collet A, Cosette P, Beloin C et al. Impact of rpoS deletion on the proteome of Escherichia coli grown planktonically and as biofilm. J. Proteome Res. 7(11), 4659-4669 (2008).
    • (2008) J. Proteome Res , vol.7 , Issue.11 , pp. 4659-4669
    • Collet, A.1    Cosette, P.2    Beloin, C.3
  • 63
    • 67650835651 scopus 로고    scopus 로고
    • Localized expression profiles of rpos in escherichia coli biofilms
    • Ito A, May T, Taniuchi A, Kawata K, Okabe S. Localized expression profiles of rpoS in Escherichia coli biofilms. Biotechnol. Bioeng. 103(5), 975-983 (2009).
    • (2009) Biotechnol. Bioeng , vol.103 , Issue.5 , pp. 975-983
    • Ito, A.1    May, T.2    Taniuchi, A.3    Kawata, K.4    Okabe, S.5
  • 64
    • 84880041972 scopus 로고    scopus 로고
    • Microanatomy at cellular resolution and spatial order of physiological differentiation in a bacterial biofilm
    • Serra DO, Richter AM, Klauck G, Mika F, Hengge R. Microanatomy at cellular resolution and spatial order of physiological differentiation in a bacterial biofilm. MBio 4(2), e00103-e00113 (2013).
    • (2013) MBio , vol.4 , Issue.2
    • Serra, D.O.1    Richter, A.M.2    Klauck, G.3    Mika, F.4    Hengge, R.5
  • 65
    • 0020590028 scopus 로고
    • HipA, a newly recognized gene of escherichia coli k-12 that affects frequency of persistence after inhibition of murein synthesis
    • Moyed HS, Bertrand KP. hipA, a newly recognized gene of Escherichia coli K-12 that affects frequency of persistence after inhibition of murein synthesis. J. Bacteriol. 155(2), 768-775 (1983).
    • (1983) J. Bacteriol , vol.155 , Issue.2 , pp. 768-775
    • Moyed, H.S.1    Bertrand, K.P.2
  • 66
    • 57349189421 scopus 로고    scopus 로고
    • Small toxic proteins and the antisense rnas that repress them
    • Fozo EM, Hemm MR, Storz G. Small toxic proteins and the antisense RNAs that repress them. Microbiol. Mol. Biol. Rev. 72(4), 579-589 (2008).
    • (2008) Microbiol. Mol. Biol. Rev , vol.72 , Issue.4 , pp. 579-589
    • Fozo, E.M.1    Hemm, M.R.2    Storz, G.3
  • 68
    • 0141788221 scopus 로고    scopus 로고
    • Involvement of rpos in the survival of escherichia coli in the viable but non-culturable state
    • Boaretti M, Lleo MM, Bonato B, Signoretto C, Canepari P. Involvement of rpoS in the survival of Escherichia coli in the viable but non-culturable state. Environ. Microbiol. 5(10), 986-996 (2003).
    • (2003) Environ. Microbiol , vol.5 , Issue.10 , pp. 986-996
    • Boaretti, M.1    Lleo, M.M.2    Bonato, B.3    Signoretto, C.4    Canepari, P.5
  • 69
    • 77956528497 scopus 로고    scopus 로고
    • Separate dna pol ii- and pol IV-dependent pathways of stress-induced mutation during double-strand-break repair in escherichia coli are controlled by rpos
    • Frisch RL, Su Y, Thornton PC, Gibson JL, Rosenberg SM, Hastings PJ. Separate DNA Pol II- and Pol IV-dependent pathways of stress-induced mutation during double-strand-break repair in Escherichia coli are controlled by RpoS. J. Bacteriol. 192(18), 4694-4700 (2010).
    • (2010) J. Bacteriol , vol.192 , Issue.18 , pp. 4694-4700
    • Frisch, R.L.1    Su, Y.2    Thornton, P.C.3    Gibson, J.L.4    Rosenberg, S.M.5    Hastings, P.J.6
  • 70
    • 84875876463 scopus 로고    scopus 로고
    • Beta-lactam antibiotics promote bacterial mutagenesis via an rpos-mediated reduction in replication fidelity
    • Gutierrez A, Laureti L, Crussard S et al. Beta-lactam antibiotics promote bacterial mutagenesis via an RpoS-mediated reduction in replication fidelity. Nat. Commun. 4, 1610 (2013).
    • Nat. Commun , vol.4 , Issue.2013 , pp. 1610
    • Gutierrez, A.1    Laureti, L.2    Crussard, S.3
  • 71
    • 77349109268 scopus 로고    scopus 로고
    • Role of rpos in virulence of pathogens
    • Dong T, Schellhorn HE. Role of RpoS in virulence of pathogens. Infect. Immun. 78(3), 887-897 (2010).
    • (2010) Infect. Immun , vol.78 , Issue.3 , pp. 887-897
    • Dong, T.1    Schellhorn, H.E.2
  • 72
    • 0027087219 scopus 로고
    • The alternative sigma factor katf (RPOS) regulates salmonella virulence
    • Fang FC, Libby SJ, Buchmeier NA et al. The alternative sigma factor katF (rpoS) regulates Salmonella virulence. Proc. Natl Acad. Sci. USA 89(24), 11978-11982 (1992).
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , Issue.24 , pp. 11978-11982
    • Fang, F.C.1    Libby, S.J.2    Buchmeier, N.A.3
  • 73
    • 0027029997 scopus 로고
    • The putative sigma factor katf (rpos) is required for the transcription of the salmonella typhimurium virulence gene spvb in escherichia coli
    • Norel F, Robbe-Saule V, Popoff MY, Coynault C. The putative sigma factor katF (RpoS) is required for the transcription of the Salmonella typhimurium virulence gene spvB in Escherichia coli. FEMS Microbiol. Lett. 78(2-3), 271-276 (1992).
    • (1992) FEMS Microbiol. Lett , vol.78 , Issue.2-3 , pp. 271-276
    • Norel, F.1    Robbe-Saule, V.2    Popoff, M.Y.3    Coynault, C.4
  • 74
    • 0029846537 scopus 로고    scopus 로고
    • Virulence and vaccine potential of salmonella typhimurium mutants deficient in the expression of the rpos (sigma s) regulon
    • Coynault C, Robbe-Saule V, Norel F. Virulence and vaccine potential of Salmonella typhimurium mutants deficient in the expression of the RpoS (sigma S) regulon. Mol. Microbiol. 22(1), 149-160 (1996).
    • (1996) Mol. Microbiol , vol.22 , Issue.1 , pp. 149-160
    • Coynault, C.1    Robbe-Saule, V.2    Norel, F.3
  • 75
    • 0034071175 scopus 로고    scopus 로고
    • RpoS gene function is a disadvantage for escherichia coli bj4 during competitive colonization of the mouse large intestine
    • Krogfelt KA, Hjulgaard M, Sorensen K, Cohen PS, Givskov M. rpoS gene function is a disadvantage for Escherichia coli BJ4 during competitive colonization of the mouse large intestine. Infect. Immun. 68(5), 2518-2524 (2000).
    • (2000) Infect. Immun , vol.68 , Issue.5 , pp. 2518-2524
    • Krogfelt, K.A.1    Hjulgaard, M.2    Sorensen, K.3    Cohen, P.S.4    Givskov, M.5
  • 76
    • 0344235402 scopus 로고    scopus 로고
    • The growth advantage in stationary-phase phenotype conferred by rpos mutations is dependent on the ph and nutrient environment
    • Farrell MJ, Finkel SE. The growth advantage in stationary-phase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment. J. Bacteriol. 185(24), 7044-7052 (2003).
    • (2003) J. Bacteriol , vol.185 , Issue.24 , pp. 7044-7052
    • Farrell, M.J.1    Finkel, S.E.2
  • 77
    • 21244473267 scopus 로고    scopus 로고
    • Maintaining a healthy spanc balance through regulatory and mutational adaptation
    • Ferenci T. Maintaining a healthy SPANC balance through regulatory and mutational adaptation. Mol. Microbiol. 57(1), 1-8 (2005).
    • (2005) Mol. Microbiol , vol.57 , Issue.1 , pp. 1-8
    • Ferenci, T.1
  • 78
    • 0033974279 scopus 로고    scopus 로고
    • Role of rpos in acid resistance and fecal shedding of escherichia coli O157:H7
    • Price SB, Cheng CM, Kaspar CW et al. Role of rpoS in acid resistance and fecal shedding of Escherichia coli O157:H7. Appl. Environ. Microbiol. 66(2), 632-637 (2000).
    • (2000) Appl. Environ. Microbiol , vol.66 , Issue.2 , pp. 632-637
    • Price, S.B.1    Cheng, C.M.2    Kaspar, C.W.3
  • 79
    • 0033794502 scopus 로고    scopus 로고
    • The locus of enterocyte effacement (LEE)-encoded regulator controls expression of both lee-and non-lee-encoded virulence factors in enteropathogenic and enterohemorrhagic escherichia coli
    • Elliott SJ, Sperandio V, Giron JA et al. The locus of enterocyte effacement (LEE)-encoded regulator controls expression of both LEE-and non-LEE-encoded virulence factors in enteropathogenic and enterohemorrhagic Escherichia coli. Infect. Immun. 68(11), 6115-6126 (2000).
    • (2000) Infect. Immun , vol.68 , Issue.11 , pp. 6115-6126
    • Elliott, S.J.1    Sperandio, V.2    Giron, J.A.3
  • 80
    • 20444483297 scopus 로고    scopus 로고
    • ClpXP protease controls expression of the type III protein secretion system through regulation of rpos and grlr levels in enterohemorrhagic escherichia coli
    • Iyoda S, Watanabe H. ClpXP protease controls expression of the type III protein secretion system through regulation of RpoS and GrlR levels in enterohemorrhagic Escherichia coli. J. Bacteriol. 187(12), 4086-4094 (2005).
    • (2005) J. Bacteriol , vol.187 , Issue.12 , pp. 4086-4094
    • Iyoda, S.1    Watanabe, H.2
  • 81
    • 27744553299 scopus 로고    scopus 로고
    • ClpXP controls the expression of lee genes in enterohaemorrhagic escherichia coli
    • Tomoyasu T, Takaya A, Handa Y, Karata K, Yamamoto T. ClpXP controls the expression of LEE genes in enterohaemorrhagic Escherichia coli. FEMS Microbiol. Lett. 253(1), 59-66 (2005).
    • (2005) FEMS Microbiol. Lett , vol.253 , Issue.1 , pp. 59-66
    • Tomoyasu, T.1    Takaya, A.2    Handa, Y.3    Karata, K.4    Yamamoto, T.5
  • 82
    • 33745753388 scopus 로고    scopus 로고
    • Concert of regulators to switch on lee expression in enterohemorrhagic escherichia coli O157:H7: Interplay between ler, grla, hns and rpos
    • Laaberki MH, Janabi N, Oswald E, Repoila F. Concert of regulators to switch on LEE expression in enterohemorrhagic Escherichia coli O157:H7: interplay between Ler, GrlA, HNS and RpoS. Int. J. Med. Microbiol. 296(4-5), 197-210 (2006).
    • (2006) Int. J. Med. Microbiol , vol.296 , Issue.4-5 , pp. 197-210
    • Laaberki, M.H.1    Janabi, N.2    Oswald, E.3    Repoila, F.4
  • 83
    • 0033026656 scopus 로고    scopus 로고
    • Transcriptional regulation of the esp genes of enterohemorrhagic escherichia coli
    • Beltrametti F, Kresse AU, Guzman CA. Transcriptional regulation of the esp genes of enterohemorrhagic Escherichia coli. J. Bacteriol. 181(11), 3409-3418 (1999).
    • (1999) J. Bacteriol , vol.181 , Issue.11 , pp. 3409-3418
    • Beltrametti, F.1    Kresse, A.U.2    Guzman, C.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.