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Volumn 2, Issue 11, 2012, Pages 1341-1344

Escherichia coli lacking RpoS are rare in natural populations of non-pathogens

Author keywords

Factor; Genetics; Population; SPANC; Transcription; Variation

Indexed keywords

BACTERIAL PROTEIN; SIGMA FACTOR; SIGMA FACTOR KATF PROTEIN, BACTERIA;

EID: 84883169159     PISSN: None     EISSN: 21601836     Source Type: Journal    
DOI: 10.1534/g3.112.003855     Document Type: Article
Times cited : (18)

References (31)
  • 1
    • 80053226878 scopus 로고    scopus 로고
    • The RpoS-mediated general stress response in Escherichia coli
    • Battesti, A., N. Majdalani, and S. Gottesman, 2011 The RpoS-mediated general stress response in Escherichia coli. Annu. Rev. Microbiol. 2011: 189-213.
    • (2011) Annu. Rev. Microbiol. , vol.2011 , pp. 189-213
    • Battesti, A.1    Majdalani, N.2    Gottesman, S.3
  • 2
    • 23344437538 scopus 로고    scopus 로고
    • Characterization of enterohemorrhagic Escherichia coli strains based on acid resistance phenotypes
    • Bhagwat, A. A., L. Chan, R. Han, J. Tan, M. Kothary et al., 2005 Characterization of enterohemorrhagic Escherichia coli strains based on acid resistance phenotypes. Infect. Immun. 73: 4993-5003.
    • (2005) Infect. Immun. , vol.73 , pp. 4993-5003
    • Bhagwat, A.A.1    Chan, L.2    Han, R.3    Tan, J.4    Kothary, M.5
  • 3
    • 33746064095 scopus 로고    scopus 로고
    • Functional heterogeneity of RpoS in stress tolerance of enterohe- morrhagic Escherichia coli strains
    • Bhagwat, A. A., J. Tan, M. Sharma, M. Kothary, S. Low et al., 2006 Functional heterogeneity of RpoS in stress tolerance of enterohe- morrhagic Escherichia coli strains. Appl. Environ. Microbiol. 72: 4978- 4986.
    • (2006) Appl. Environ. Microbiol. , vol.72
    • Bhagwat, A.A.1    Tan, J.2    Sharma, M.3    Kothary, M.4    Low, S.5
  • 4
    • 0036331056 scopus 로고    scopus 로고
    • DksA affects ppGpp induction of RpoS at a translational level
    • Brown, L., D. Gentry, T. Elliott, and M. Cashel, 2002 DksA affects ppGpp induction of RpoS at a translational level. J. Bacteriol. 184: 4455-4465.
    • (2002) J. Bacteriol. , vol.184 , pp. 4455-4465
    • Brown, L.1    Gentry, D.2    Elliott, T.3    Cashel, M.4
  • 5
    • 83055180134 scopus 로고    scopus 로고
    • Phenotypic diversity caused by differential RpoS activity among environmental Escherichia coli isolates
    • Chiang, S. M., T. Dong, T. A. Edge, and H. E. Schellhorn, 2011 Phenotypic diversity caused by differential RpoS activity among environmental Escherichia coli isolates. Appl. Environ. Microbiol. 77: 7915-7923.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 7915-7923
    • Chiang, S.M.1    Dong, T.2    Edge, T.A.3    Schellhorn, H.E.4
  • 6
    • 0031844376 scopus 로고    scopus 로고
    • Negative regulation by RpoS: a case of sigma factor competition
    • Farewell, A., K. Kvint, and T. Nyström, 1998 Negative regulation by RpoS: a case of sigma factor competition. Mol. Microbiol. 29: 1039-1051.
    • (1998) Mol. Microbiol. , vol.29 , pp. 1039-1051
    • Farewell, A.1    Kvint, K.2    Nyström, T.3
  • 7
    • 0344235402 scopus 로고    scopus 로고
    • The growth advantage in stationaryphase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment
    • Farrell, M. J., and S. E. Finkel, 2003 The growth advantage in stationaryphase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment. J. Bacteriol. 185: 7044-7052.
    • (2003) J. Bacteriol. , vol.185 , pp. 7044-7052
    • Farrell, M.J.1    Finkel, S.E.2
  • 8
    • 21244473267 scopus 로고    scopus 로고
    • Maintaining a healthy SPANC balance through regulatory and mutational adaptation
    • Ferenci, T., 2005 Maintaining a healthy SPANC balance through regulatory and mutational adaptation. Mol. Microbiol. 57: 1-8.
    • (2005) Mol. Microbiol. , vol.57 , pp. 1-8
    • Ferenci, T.1
  • 9
    • 79953122659 scopus 로고    scopus 로고
    • The constancy of global regulation across a species: the concentrations of ppGpp and RpoS are strain-specific in Escherichia coli
    • Ferenci, T., H. F. Galbiati, T. Betteridge, K. Phan, and B. Spira, 2011 The constancy of global regulation across a species: the concentrations of ppGpp and RpoS are strain-specific in Escherichia coli. BMC Microbiol. 11: 62.
    • (2011) BMC Microbiol. , vol.11 , pp. 62
    • Ferenci, T.1    Galbiati, H.F.2    Betteridge, T.3    Phan, K.4    Spira, B.5
  • 10
    • 31544474634 scopus 로고    scopus 로고
    • Long-term survival during stationary phase: evolution and the GASP phenotype
    • Finkel, S. E., 2006 Long-term survival during stationary phase: evolution and the GASP phenotype. Nat. Rev. Microbiol. 4: 113-120.
    • (2006) Nat. Rev. Microbiol. , vol.4 , pp. 113-120
    • Finkel, S.E.1
  • 11
    • 0000689283 scopus 로고    scopus 로고
    • Immunoblotting and immunodetection
    • Unit 6.2 in Current Protocols in Cell Biology, edited by J. S. Bonifacino, M. Dasso, J. B. Harford, J. Lippincott-Schwartz, and K. M. Yamada. John Wiley & Sons, Inc., Hoboken, NJ
    • Gallagher, S., S. E. Winston, S. A. Fuller, and J. G. R. Hurrell, 2011 Immunoblotting and immunodetection, Unit 6.2 in Current Protocols in Cell Biology, edited by J. S. Bonifacino, M. Dasso, J. B. Harford, J. Lippincott-Schwartz, and K. M. Yamada. John Wiley & Sons, Inc., Hoboken, NJ.
    • (2011)
    • Gallagher, S.1    Winston, S.E.2    Fuller, S.A.3    Hurrell, J.G.R.4
  • 12
    • 0346882653 scopus 로고    scopus 로고
    • The distribution and genetic structure of Escherichia coli in Australian vertebrates: host and geographic effects
    • Gordon, D. M., and A. Cowling, 2003 The distribution and genetic structure of Escherichia coli in Australian vertebrates: host and geographic effects. Microbiology 149: 3575-3586.
    • (2003) Microbiology , vol.149 , pp. 3575-3586
    • Gordon, D.M.1    Cowling, A.2
  • 13
    • 0032851798 scopus 로고    scopus 로고
    • The distribution of enteric bacteria from Australian mammals: host and geographical effects
    • Gordon, D. M., and F. FitzGibbon, 1999 The distribution of enteric bacteria from Australian mammals: host and geographical effects. Microbiology 145: 2663-2671.
    • (1999) Microbiology , vol.145 , pp. 2663-2671
    • Gordon, D.M.1    FitzGibbon, F.2
  • 14
    • 13444253010 scopus 로고    scopus 로고
    • Influence of the age and sex of human hosts on the distribution of Escherichia coli ECOR groups and virulence traits
    • Gordon, D. M., S. E. Stern, and P. J. Collignon, 2005 Influence of the age and sex of human hosts on the distribution of Escherichia coli ECOR groups and virulence traits. Microbiology 151: 15-23.
    • (2005) Microbiology , vol.151 , pp. 15-23
    • Gordon, D.M.1    Stern, S.E.2    Collignon, P.J.3
  • 16
    • 84883139984 scopus 로고    scopus 로고
    • Stationary-phase gene regulation in Escherichia coli
    • Chapter 5.6.3 in EcoSal-Escherichia coli and Salmonella: Cellular and Molecular Biology, edited by A. Böck, R. Curtiss III, J. B. Kaper et al., ASM Press, Washington, DC. Available at
    • Hengge, R., 2011 Stationary-phase gene regulation in Escherichia coli, Chapter 5.6.3 in EcoSal-Escherichia coli and Salmonella: Cellular and Molecular Biology, edited by A. Böck, R. Curtiss III, J. B. Kaper et al., ASM Press, Washington, DC. Available at: www.ecosal.org.
    • (2011)
    • Hengge, R.1
  • 17
    • 33646181748 scopus 로고    scopus 로고
    • Genotype-by-environment interactions influencing the emergence of rpoS mutations in Escherichia coli populations
    • King, T., S. Seeto, and T. Ferenci, 2006 Genotype-by-environment interactions influencing the emergence of rpoS mutations in Escherichia coli populations. Genetics 172: 2071-2079.
    • (2006) Genetics , vol.172 , pp. 2071-2079
    • King, T.1    Seeto, S.2    Ferenci, T.3
  • 18
    • 78149294782 scopus 로고    scopus 로고
    • Molecular and evolutionary bases of within-patient genotypic and phenotypic diversity in Escherichia coli extraintestinal infections
    • Levert, M., O. Zamfir, O. Clermont, O. Bouvet, S. Lespinats et al., 2010 Molecular and evolutionary bases of within-patient genotypic and phenotypic diversity in Escherichia coli extraintestinal infections. PLoS Pathog. 6: e1001125.
    • (2010) PLoS Pathog. , vol.6
    • Levert, M.1    Zamfir, O.2    Clermont, O.3    Bouvet, O.4    Lespinats, S.5
  • 19
    • 0036181664 scopus 로고    scopus 로고
    • rpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress responses
    • Notley-McRobb, L., T. King, and T. Ferenci, 2002 rpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress responses. J. Bacteriol. 184: 806-811.
    • (2002) J. Bacteriol. , vol.184 , pp. 806-811
    • Notley-McRobb, L.1    King, T.2    Ferenci, T.3
  • 20
    • 8544232750 scopus 로고    scopus 로고
    • MicroReview: Growth vs. maintenance: a trade-off dictated by RNA polymerase availability and sigma factor competition?
    • Nyström, T., 2004 MicroReview: Growth vs. maintenance: a trade-off dictated by RNA polymerase availability and sigma factor competition?. Mol. Microbiol. 54: 855-862.
    • (2004) Mol. Microbiol. , vol.54 , pp. 855-862
    • Nyström, T.1
  • 21
    • 0021367325 scopus 로고
    • Standard reference strains of Escherichia coli from natural populations
    • Ochman, H., and R. K. Selander, 1984 Standard reference strains of Escherichia coli from natural populations. J. Bacteriol. 157: 690-693.
    • (1984) J. Bacteriol. , vol.157 , pp. 690-693
    • Ochman, H.1    Selander, R.K.2
  • 22
    • 84874467496 scopus 로고    scopus 로고
    • R: A Language and Environment for Statistical Computing
    • R Foundation for Statistical Computing, Vienna, Austria
    • R Development Core Team, 2009 R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria.
    • (2009) R Development Core Team
  • 23
    • 0042530426 scopus 로고    scopus 로고
    • Characterization of the RpoS status of clinical isolates of Salmonella enterica
    • Robbe-Saule, V., G. Algorta, I. Rouilhac, and F. Norel, 2003 Characterization of the RpoS status of clinical isolates of Salmonella enterica. Appl. Environ. Microbiol. 69: 4352-4358.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 4352-4358
    • Robbe-Saule, V.1    Algorta, G.2    Rouilhac, I.3    Norel, F.4
  • 24
    • 80455126043 scopus 로고    scopus 로고
    • The uncertain consequences of transferring bacterial strains between laboratories - rpoS instability as an example
    • Spira, B., R. de Almeida Toledo, R. P. Maharjan, and T. Ferenci, 2011 The uncertain consequences of transferring bacterial strains between laboratories - rpoS instability as an example. BMC Microbiol. 11: 248.
    • (2011) BMC Microbiol. , vol.11 , pp. 248
    • Spira, B.1    de Almeida Toledo, R.2    Maharjan, R.P.3    Ferenci, T.4
  • 25
    • 73449104573 scopus 로고    scopus 로고
    • Compensatory evolution of gene regulation in response to stress by Escherichia coli lacking RpoS
    • Stoebel, D. M., K. Hokamp, M. S. Last, and C. J. Dorman, 2009 Compensatory evolution of gene regulation in response to stress by Escherichia coli lacking RpoS. PLoS Genet. 5: e1000671.
    • (2009) PLoS Genet. , vol.5
    • Stoebel, D.M.1    Hokamp, K.2    Last, M.S.3    Dorman, C.J.4
  • 26
    • 0033902954 scopus 로고    scopus 로고
    • rpoS mutants in archival cultures of Salmonella enterica serovar typhimurium
    • Sutton, A., R. Buencamino, and A. Eisenstark, 2000 rpoS mutants in archival cultures of Salmonella enterica serovar typhimurium. J. Bacteriol. 182: 4375-4379.
    • (2000) J. Bacteriol. , vol.182 , pp. 4375-4379
    • Sutton, A.1    Buencamino, R.2    Eisenstark, A.3
  • 28
    • 33846947959 scopus 로고    scopus 로고
    • The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase
    • Typas, A., G. Becker, and R. Hengge, 2007 The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase. Mol. Microbiol. 63: 1296-1306.
    • (2007) Mol. Microbiol. , vol.63 , pp. 1296-1306
    • Typas, A.1    Becker, G.2    Hengge, R.3
  • 30
    • 83155178426 scopus 로고    scopus 로고
    • Intergenic sequence comparison of Escherichia coli isolates reveals lifestyle adaptations but not host specificity
    • White, A. P., K. A. Sibley, C. D. Sibley, J. D. Wasmuth, R. Schaefer et al., 2011 Intergenic sequence comparison of Escherichia coli isolates reveals lifestyle adaptations but not host specificity. Appl. Environ. Microbiol. 77: 7620-7632.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 7620-7632
    • White, A.P.1    Sibley, K.A.2    Sibley, C.D.3    Wasmuth, J.D.4    Schaefer, R.5
  • 31
    • 0027510647 scopus 로고
    • Microbial competition: Escherichia coli mutants that take over stationary phase cultures
    • (New York, N.Y.)
    • Zambrano, M. M., D. A. Siegele, M. Almirón, A. Tormo, and R. Kolter, 1993 Microbial competition: Escherichia coli mutants that take over stationary phase cultures. Science (New York, N.Y.) 259: 1757-1760.
    • (1993) Science , vol.259 , pp. 1757-1760
    • Zambrano, M.M.1    Siegele, D.A.2    Almirón, M.3    Tormo, A.4    Kolter, R.5


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