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Volumn 63, Issue 5, 2014, Pages 389-397

Transcription-related element gene expression pattern differs between microglia and macrophages during inflammation

Author keywords

Inflammation; Macrophages; Microglia; RNA seq; Transcription related elements

Indexed keywords

HISTONE H3; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; MESSENGER RNA; TRANSCRIPTION FACTOR; TRANSCRIPTOME; HISTONE DEMETHYLASE; KDM6B PROTEIN, MOUSE; LIPOPOLYSACCHARIDE;

EID: 84899656270     PISSN: 10233830     EISSN: 1420908X     Source Type: Journal    
DOI: 10.1007/s00011-014-0711-y     Document Type: Article
Times cited : (17)

References (30)
  • 1
    • 0036953725 scopus 로고    scopus 로고
    • Microglia in diseases of the central nervous system
    • Nelson PT, Soma LA, Lavi E. Microglia in diseases of the central nervous system. Ann Med. 2002;34(7-8):491-500. (Pubitemid 36113806)
    • (2002) Annals of Medicine , vol.34 , Issue.7-8 , pp. 491-500
    • Nelson, P.T.1    Soma, L.A.2    Lavi, E.3
  • 2
    • 33745685998 scopus 로고    scopus 로고
    • Microglia and inflammation: Impact on developmental brain injuries
    • doi:10.1002/mrdd.20102
    • Chew LJ, Takanohashi A, Bell M. Microglia and inflammation: impact on developmental brain injuries. Mental Retard Dev Disabil Res Rev. 2006;12(2):105-12. doi:10.1002/mrdd.20102.
    • (2006) Mental Retard Dev Disabil Res Rev , vol.12 , Issue.2 , pp. 105-112
    • Chew, L.J.1    Takanohashi, A.2    Bell, M.3
  • 3
    • 77957554717 scopus 로고    scopus 로고
    • Molecular mechanism of NLRP3 inflammasome activation
    • doi:10.1007/s10875-010-9440-3
    • Jin C, Flavell RA. Molecular mechanism of NLRP3 inflammasome activation. J Clin Immunol. 2010;30(5):628-31. doi:10.1007/s10875-010-9440-3.
    • (2010) J Clin Immunol , vol.30 , Issue.5 , pp. 628-631
    • Jin, C.1    Flavell, R.A.2
  • 5
    • 80355143546 scopus 로고    scopus 로고
    • Microglial cell origin and phenotypes in health and disease
    • doi:10.1038/nri3086
    • Saijo K, Glass CK. Microglial cell origin and phenotypes in health and disease. Nat Rev Immunol. 2011;11(11):775-87. doi:10.1038/nri3086.
    • (2011) Nat Rev Immunol , vol.11 , Issue.11 , pp. 775-787
    • Saijo, K.1    Glass, C.K.2
  • 6
    • 77950363010 scopus 로고    scopus 로고
    • Mechanisms underlying inflammation in neurodegeneration
    • doi:10.1016/j.cell.2010.02.016
    • Glass CK, Saijo K, Winner B, Marchetto MC, Gage FH. Mechanisms underlying inflammation in neurodegeneration. Cell. 2010;140(6):918-34. doi:10.1016/j.cell.2010.02.016.
    • (2010) Cell , vol.140 , Issue.6 , pp. 918-934
    • Glass, C.K.1    Saijo, K.2    Winner, B.3    Marchetto, M.C.4    Gage, F.H.5
  • 7
    • 77950858637 scopus 로고    scopus 로고
    • Microglia in neurodegenerative disease
    • doi:10.1038/nrneurol.2010.17
    • Perry VH, Nicoll JA, Holmes C. Microglia in neurodegenerative disease. Nat Rev Neurol. 2010;6(4):193-201. doi:10.1038/nrneurol.2010.17.
    • (2010) Nat Rev Neurol , vol.6 , Issue.4 , pp. 193-201
    • Perry, V.H.1    Nicoll, J.A.2    Holmes, C.3
  • 8
    • 78149435065 scopus 로고    scopus 로고
    • The myeloid cells of the central nervous system parenchyma
    • doi:10.1038/nature09615
    • Ransohoff RM, Cardona AE. The myeloid cells of the central nervous system parenchyma. Nature. 2010;468(7321):253-62. doi:10.1038/nature09615.
    • (2010) Nature , vol.468 , Issue.7321 , pp. 253-262
    • Ransohoff, R.M.1    Cardona, A.E.2
  • 10
    • 0033046220 scopus 로고    scopus 로고
    • Mechanisms of phagocytosis in macrophages
    • DOI 10.1146/annurev.immunol.17.1.593
    • Aderem A, Underhill DM. Mechanisms of phagocytosis in macrophages. Annu Rev Immunol. 1999;17:593-623. doi:10.1146/annurev.immunol.17.1.593. (Pubitemid 29241135)
    • (1999) Annual Review of Immunology , vol.17 , pp. 593-623
    • Aderem, A.1    Underhill, D.M.2
  • 11
    • 79952901680 scopus 로고    scopus 로고
    • Enhancer function: New insights into the regulation of tissue-specific gene expression
    • doi:10.1038/nrg2957
    • Ong CT, Corces VG. Enhancer function: new insights into the regulation of tissue-specific gene expression. Nat Rev Genet. 2011;12(4):283-93. doi:10.1038/nrg2957.
    • (2011) Nat Rev Genet , vol.12 , Issue.4 , pp. 283-293
    • Ong, C.T.1    Corces, V.G.2
  • 12
    • 77949977555 scopus 로고    scopus 로고
    • Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages
    • doi:10.1016/j.immuni.2010.02.008
    • Ghisletti S, Barozzi I, Mietton F, Polletti S, De Santa F, Venturini E, et al. Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages. Immunity. 2010;32(3):317-28. doi:10.1016/j.immuni.2010.02.008.
    • (2010) Immunity , vol.32 , Issue.3 , pp. 317-328
    • Ghisletti, S.1    Barozzi, I.2    Mietton, F.3    Polletti, S.4    De Santa, F.5    Venturini, E.6
  • 13
    • 0028136726 scopus 로고
    • Requirement of transcription factor PU.1 in the development of multiple hematopoietic lineages
    • Scott EW, Simon MC, Anastasi J, Singh H. Requirement of transcription factor PU.1 in the development of multiple hematopoietic lineages. Science. 1994;265(5178):1573-7.
    • (1994) Science , vol.265 , Issue.5178 , pp. 1573-1577
    • Scott, E.W.1    Simon, M.C.2    Anastasi, J.3    Singh, H.4
  • 14
    • 84876216563 scopus 로고    scopus 로고
    • Master transcription factors and mediator establish super-enhancers at key cell identity genes
    • doi:10.1016/j.cell.2013.03.035
    • Whyte WA, Orlando DA, Hnisz D, Abraham BJ, Lin CY, Kagey MH, et al. Master transcription factors and mediator establish super-enhancers at key cell identity genes. Cell. 2013;153(2):307-19. doi:10.1016/j.cell.2013.03.035.
    • (2013) Cell , vol.153 , Issue.2 , pp. 307-319
    • Whyte, W.A.1    Orlando, D.A.2    Hnisz, D.3    Abraham, B.J.4    Lin, C.Y.5    Kagey, M.H.6
  • 15
    • 84858072878 scopus 로고    scopus 로고
    • Comparison of polarization properties of human adult microglia and blood-derived macrophages
    • doi:10.1002/glia.22298
    • Durafourt BA, Moore CS, Zammit DA, Johnson TA, Zaguia F, Guiot MC, et al. Comparison of polarization properties of human adult microglia and blood-derived macrophages. Glia. 2012;60(5):717-27. doi:10.1002/glia.22298.
    • (2012) Glia , vol.60 , Issue.5 , pp. 717-727
    • Durafourt, B.A.1    Moore, C.S.2    Zammit, D.A.3    Johnson, T.A.4    Zaguia, F.5    Guiot, M.C.6
  • 16
    • 79960944041 scopus 로고    scopus 로고
    • Fluoxetine up-regulates Bcl-xL expression in rat C6 glioma cells
    • doi:10.4306/pi.2011.8.2.161
    • Choi MR, Oh DH, Kim SH, Yang BH, Lee JS, Choi J, et al. Fluoxetine up-regulates Bcl-xL expression in rat C6 glioma cells. Psychiatry Invest. 2011;8(2):161-8. doi:10.4306/pi.2011.8.2.161.
    • (2011) Psychiatry Invest , vol.8 , Issue.2 , pp. 161-168
    • Choi, M.R.1    Oh, D.H.2    Kim, S.H.3    Yang, B.H.4    Lee, J.S.5    Choi, J.6
  • 17
    • 78650582970 scopus 로고    scopus 로고
    • Histone lysine methylation and demethylation pathways in cancer
    • doi:10.1016/j.bbcan.2010.10.002
    • Varier RA, Timmers HT. Histone lysine methylation and demethylation pathways in cancer. Biochim Biophys Acta. 2011;1815(1):75-89. doi:10.1016/j.bbcan.2010.10.002.
    • (2011) Biochim Biophys Acta , vol.1815 , Issue.1 , pp. 75-89
    • Varier, R.A.1    Timmers, H.T.2
  • 18
    • 34548644772 scopus 로고    scopus 로고
    • The Histone H3 Lysine-27 Demethylase Jmjd3 Links Inflammation to Inhibition of Polycomb-Mediated Gene Silencing
    • DOI 10.1016/j.cell.2007.08.019, PII S0092867407010823
    • De Santa F, Totaro MG, Prosperini E, Notarbartolo S, Testa G, Natoli G. The histone H3 lysine-27 demethylase Jmjd3 links inflammation to inhibition of polycomb-mediated gene silencing. Cell. 2007;130(6):1083-94. doi:10.1016/j.cell.2007.08.019. (Pubitemid 47410272)
    • (2007) Cell , vol.130 , Issue.6 , pp. 1083-1094
    • De Santa, F.1    Totaro, M.G.2    Prosperini, E.3    Notarbartolo, S.4    Testa, G.5    Natoli, G.6
  • 19
    • 69949140066 scopus 로고    scopus 로고
    • The suitability of BV2 cells as alternative model system for primary microglia cultures or for animal experiments examining brain inflammation
    • Henn A, Lund S, Hedtjarn M, Schrattenholz A, Porzgen P, Leist M. The suitability of BV2 cells as alternative model system for primary microglia cultures or for animal experiments examining brain inflammation. Altex. 2009;26(2):83-94.
    • (2009) Altex , vol.26 , Issue.2 , pp. 83-94
    • Henn, A.1    Lund, S.2    Hedtjarn, M.3    Schrattenholz, A.4    Porzgen, P.5    Leist, M.6
  • 20
    • 79952534189 scopus 로고    scopus 로고
    • Regulation of chromatin by histone modifications
    • doi:10.1038/cr.2011.22
    • Bannister AJ, Kouzarides T. Regulation of chromatin by histone modifications. Cell Res. 2011;21(3):381-95. doi:10.1038/cr.2011.22.
    • (2011) Cell Res , vol.21 , Issue.3 , pp. 381-395
    • Bannister, A.J.1    Kouzarides, T.2
  • 21
    • 33747455678 scopus 로고    scopus 로고
    • JmjC-domain-containing proteins and histone demethylation
    • DOI 10.1038/nrg1945, PII NRG1945
    • Klose RJ, Kallin EM, Zhang Y. JmjC-domain-containing proteins and histone demethylation. Nat Rev Genet. 2006;7(9):715-27. doi:10.1038/nrg1945. (Pubitemid 44260007)
    • (2006) Nature Reviews Genetics , vol.7 , Issue.9 , pp. 715-727
    • Klose, R.J.1    Kallin, E.M.2    Zhang, Y.3
  • 22
    • 35348826654 scopus 로고    scopus 로고
    • JMJD3 is a histone H3K27 demethylase
    • DOI 10.1038/cr.2007.83, PII CR200783
    • Xiang Y, Zhu Z, Han G, Lin H, Xu L, Chen CD. JMJD3 is a histone H3K27 demethylase. Cell Res. 2007;17(10):850-7. doi:10.1038/cr.2007.83. (Pubitemid 47585113)
    • (2007) Cell Research , vol.17 , Issue.10 , pp. 850-857
    • Xiang, Y.1    Zhu, Z.2    Han, G.3    Lin, H.4    Xu, L.5    Chen, C.D.6
  • 23
    • 77956954197 scopus 로고    scopus 로고
    • The Jmjd3-Irf4 axis regulates M2 macrophage polarization and host responses against helminth infection
    • doi:10.1038/ni.1920
    • Satoh T, Takeuchi O, Vandenbon A, Yasuda K, Tanaka Y, Kumagai Y, et al. The Jmjd3-Irf4 axis regulates M2 macrophage polarization and host responses against helminth infection. Nat Immunol. 2010;11(10):936-44. doi:10.1038/ni.1920.
    • (2010) Nat Immunol , vol.11 , Issue.10 , pp. 936-944
    • Satoh, T.1    Takeuchi, O.2    Vandenbon, A.3    Yasuda, K.4    Tanaka, Y.5    Kumagai, Y.6
  • 24
    • 0033829348 scopus 로고    scopus 로고
    • Differential activation of murine macrophages by angelan and LPS
    • Jeon YJ, Han SB, Ahn KS, Kim HM. Differential activation of murine macrophages by angelan and LPS. Immunopharmacology. 2000;49(3):275-84.
    • (2000) Immunopharmacology , vol.49 , Issue.3 , pp. 275-284
    • Jeon, Y.J.1    Han, S.B.2    Ahn, K.S.3    Kim, H.M.4
  • 25
    • 84864251757 scopus 로고    scopus 로고
    • Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions
    • doi:10.1016/j.cell.2012.05.043
    • Bhatt DM, Pandya-Jones A, Tong AJ, Barozzi I, Lissner MM, Natoli G, et al. Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions. Cell. 2012;150(2):279-90. doi:10.1016/j.cell.2012. 05.043.
    • (2012) Cell , vol.150 , Issue.2 , pp. 279-290
    • Bhatt, D.M.1    Pandya-Jones, A.2    Tong, A.J.3    Barozzi, I.4    Lissner, M.M.5    Natoli, G.6
  • 27
    • 78649698768 scopus 로고    scopus 로고
    • Klf4 overexpression activates epithelial cytokines and inflammation-mediated esophageal squamous cell cancer in mice
    • doi:10.1053/j.gastro.2010.08.048
    • Tetreault MP, Wang ML, Yang Y, Travis J, Yu QC, Klein-Szanto AJ, et al. Klf4 overexpression activates epithelial cytokines and inflammation-mediated esophageal squamous cell cancer in mice. Gastroenterology. 2010;139(6):2124e9- 2134e9. doi:10.1053/j.gastro.2010.08.048.
    • (2010) Gastroenterology , vol.139 , Issue.6
    • Tetreault, M.P.1    Wang, M.L.2    Yang, Y.3    Travis, J.4    Yu, Q.C.5    Klein-Szanto, A.J.6
  • 28
    • 13244265694 scopus 로고    scopus 로고
    • Sp1-associated activation of macrophage inflammatory protein-2 promoter by CpG-oligodeoxynucleotide and lipopolysaccharide
    • DOI 10.1007/s00018-004-4399-y
    • Lee KW, Lee Y, Kwon HJ, Kim DS. Sp1-associated activation of macrophage inflammatory protein-2 promoter by CpG-oligodeoxynucleotide and lipopolysaccharide. Cell Mol Life Sci CMLS. 2005;62(2):188-98. doi:10.1007/s00018-004-4399-y. (Pubitemid 40193043)
    • (2005) Cellular and Molecular Life Sciences , vol.62 , Issue.2 , pp. 188-198
    • Lee, K.-W.1    Lee, Y.2    Kwon, H.-J.3    Kim, D.-S.4
  • 29
    • 84872576236 scopus 로고    scopus 로고
    • Metabolism of inflammation limited by AMPK and pseudo-starvation
    • doi:10.1038/nature11862
    • O'Neill LA, Hardie DG. Metabolism of inflammation limited by AMPK and pseudo-starvation. Nature. 2013;493(7432):346-55. doi:10.1038/nature11862.
    • (2013) Nature , vol.493 , Issue.7432 , pp. 346-355
    • O'Neill, L.A.1    Hardie, D.G.2
  • 30
    • 80052020185 scopus 로고    scopus 로고
    • The orphan nuclear receptor SHP acts as a negative regulator in inflammatory signaling triggered by toll-like receptors
    • doi:10.1038/ni.2064
    • Yuk JM, Shin DM, Lee HM, Kim JJ, Kim SW, Jin HS, et al. The orphan nuclear receptor SHP acts as a negative regulator in inflammatory signaling triggered by toll-like receptors. Nat Immunol. 2011;12(8):742-51. doi:10.1038/ni.2064.
    • (2011) Nat Immunol , vol.12 , Issue.8 , pp. 742-751
    • Yuk, J.M.1    Shin, D.M.2    Lee, H.M.3    Kim, J.J.4    Kim, S.W.5    Jin, H.S.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.