SpliceR: An R package for classification of alternative splicing and prediction of coding potential from RNA-seq data

BMC Bioinformatics

Volumn 15, Issue 1, 2014, Pages

  Vitting Seerup, Kristoffer ^a,b   Porse, Bo T ^b,c   Sandelin, Albin ^a,b   Waage, Johannes ^a,b,c  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b UNIVERSITY OF COPENHAGEN   (Denmark)

^c UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

Alternative splicing; Isoform switch; Nonsense mediated decay (NMD); RNA Seq; SpliceR

Indexed keywords

FORECASTING;

ALTERNATIVE SPLICING; ISOFORMS; NONSENSE-MEDIATED DECAY; RNA-SEQ; SPLICER;

RNA;

ISOPROTEIN; MESSENGER RNA;

ALTERNATIVE RNA SPLICING; ARTICLE; COMPUTER PROGRAM; EXON; GENETICS; HCT116 CELL LINE; HUMAN; INTRON; METHODOLOGY; NUCLEOTIDE SEQUENCE; SEQUENCE ANALYSIS;

ALTERNATIVE SPLICING; BASE SEQUENCE; EXONS; HCT116 CELLS; HUMANS; INTRONS; PROTEIN ISOFORMS; RNA, MESSENGER; SEQUENCE ANALYSIS, RNA; SOFTWARE;

EID: 84899055188     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-15-81     Document Type: Article

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