-
1
-
-
33751100626
-
The plant immune system
-
Jones, J. D.; Dangl, J. L. The plant immune system Nature 2006, 444 (7117) 323-9
-
(2006)
Nature
, vol.444
, Issue.7117
, pp. 323-329
-
-
Jones, J.D.1
Dangl, J.L.2
-
2
-
-
0040293366
-
A single locus determines sensitivity to bacterial flagellin in Arabidopsis thaliana
-
Gomez-Gomez, L.; Felix, G.; Boller, T. A single locus determines sensitivity to bacterial flagellin in Arabidopsis thaliana Plant J. 1999, 18 (3) 277-84
-
(1999)
Plant J.
, vol.18
, Issue.3
, pp. 277-284
-
-
Gomez-Gomez, L.1
Felix, G.2
Boller, T.3
-
3
-
-
1942520270
-
Bacterial disease resistance in Arabidopsis through flagellin perception
-
Zipfel, C.; Robatzek, S.; Navarro, L.; Oakeley, E. J.; Jones, J. D.; Felix, G.; Boller, T. Bacterial disease resistance in Arabidopsis through flagellin perception Nature 2004, 428 (6984) 764-7
-
(2004)
Nature
, vol.428
, Issue.6984
, pp. 764-767
-
-
Zipfel, C.1
Robatzek, S.2
Navarro, L.3
Oakeley, E.J.4
Jones, J.D.5
Felix, G.6
Boller, T.7
-
4
-
-
80053565684
-
Interplay between calcium signalling and early signalling elements during defence responses to microbe- or damage-associated molecular patterns
-
Ranf, S.; Eschen-Lippold, L.; Pecher, P.; Lee, J.; Scheel, D. Interplay between calcium signalling and early signalling elements during defence responses to microbe- or damage-associated molecular patterns Plant J. 2011, 68 (1) 100-13
-
(2011)
Plant J.
, vol.68
, Issue.1
, pp. 100-113
-
-
Ranf, S.1
Eschen-Lippold, L.2
Pecher, P.3
Lee, J.4
Scheel, D.5
-
5
-
-
0037186599
-
MAP kinase signalling cascade in Arabidopsis innate immunity
-
Asai, T.; Tena, G.; Plotnikova, J.; Willmann, M. R.; Chiu, W. L.; Gomez-Gomez, L.; Boller, T.; Ausubel, F. M.; Sheen, J. MAP kinase signalling cascade in Arabidopsis innate immunity Nature 2002, 415 (6875) 977-83
-
(2002)
Nature
, vol.415
, Issue.6875
, pp. 977-983
-
-
Asai, T.1
Tena, G.2
Plotnikova, J.3
Willmann, M.R.4
Chiu, W.L.5
Gomez-Gomez, L.6
Boller, T.7
Ausubel, F.M.8
Sheen, J.9
-
6
-
-
57049183228
-
MEKK1, MKK1/MKK2 and MPK4 function together in a mitogen-activated protein kinase cascade to regulate innate immunity in plants
-
Gao, M.; Liu, J.; Bi, D.; Zhang, Z.; Cheng, F.; Chen, S.; Zhang, Y. MEKK1, MKK1/MKK2 and MPK4 function together in a mitogen-activated protein kinase cascade to regulate innate immunity in plants Cell Res. 2008, 18 (12) 1190-8
-
(2008)
Cell Res.
, vol.18
, Issue.12
, pp. 1190-1198
-
-
Gao, M.1
Liu, J.2
Bi, D.3
Zhang, Z.4
Cheng, F.5
Chen, S.6
Zhang, Y.7
-
7
-
-
84858982046
-
Activation of the Arabidopsis thaliana mitogen-activated protein kinase MPK11 by the flagellin-derived elicitor peptide, flg22
-
Bethke, G.; Pecher, P.; Eschen-Lippold, L.; Tsuda, K.; Katagiri, F.; Glazebrook, J.; Scheel, D.; Lee, J. Activation of the Arabidopsis thaliana mitogen-activated protein kinase MPK11 by the flagellin-derived elicitor peptide, flg22 Mol. Plant-Microbe Interact. 2012, 25 (4) 471-80
-
(2012)
Mol. Plant-Microbe Interact.
, vol.25
, Issue.4
, pp. 471-480
-
-
Bethke, G.1
Pecher, P.2
Eschen-Lippold, L.3
Tsuda, K.4
Katagiri, F.5
Glazebrook, J.6
Scheel, D.7
Lee, J.8
-
8
-
-
77949773101
-
Differential innate immune signalling via Ca(2+) sensor protein kinases
-
Boudsocq, M.; Willmann, M. R.; McCormack, M.; Lee, H.; Shan, L.; He, P.; Bush, J.; Cheng, S. H.; Sheen, J. Differential innate immune signalling via Ca(2+) sensor protein kinases Nature 2010, 464 (7287) 418-22
-
(2010)
Nature
, vol.464
, Issue.7287
, pp. 418-422
-
-
Boudsocq, M.1
Willmann, M.R.2
McCormack, M.3
Lee, H.4
Shan, L.5
He, P.6
Bush, J.7
Cheng, S.H.8
Sheen, J.9
-
9
-
-
34547110110
-
Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis
-
Benschop, J. J.; Mohammed, S.; O'Flaherty, M.; Heck, A. J.; Slijper, M.; Menke, F. L. Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis Mol. Cell. Proteomics 2007, 6 (7) 1198-214
-
(2007)
Mol. Cell. Proteomics
, vol.6
, Issue.7
, pp. 1198-1214
-
-
Benschop, J.J.1
Mohammed, S.2
O'Flaherty, M.3
Heck, A.J.4
Slijper, M.5
Menke, F.L.6
-
10
-
-
79951847236
-
Linking the proteins - Elucidation of proteome-scale networks using mass spectrometry
-
Pflieger, D.; Gonnet, F.; de la Fuente van Bentem, S.; Hirt, H.; de la Fuente, A. Linking the proteins - elucidation of proteome-scale networks using mass spectrometry Mass Spectrom. Rev. 2011, 30 (2) 268-97
-
(2011)
Mass Spectrom. Rev.
, vol.30
, Issue.2
, pp. 268-297
-
-
Pflieger, D.1
Gonnet, F.2
De La Fuente Van Bentem, S.3
Hirt, H.4
De La Fuente, A.5
-
11
-
-
34548128405
-
Quantitative phosphoproteomic analysis of plasma membrane proteins reveals regulatory mechanisms of plant innate immune responses
-
Nuhse, T. S.; Bottrill, A. R.; Jones, A. M.; Peck, S. C. Quantitative phosphoproteomic analysis of plasma membrane proteins reveals regulatory mechanisms of plant innate immune responses Plant J. 2007, 51 (5) 931-40
-
(2007)
Plant J.
, vol.51
, Issue.5
, pp. 931-940
-
-
Nuhse, T.S.1
Bottrill, A.R.2
Jones, A.M.3
Peck, S.C.4
-
12
-
-
70349974261
-
High precision quantitative proteomics using iTRAQ on an LTQ Orbitrap: A new mass spectrometric method combining the benefits of all
-
Kocher, T.; Pichler, P.; Schutzbier, M.; Stingl, C.; Kaul, A.; Teucher, N.; Hasenfuss, G.; Penninger, J. M.; Mechtler, K. High precision quantitative proteomics using iTRAQ on an LTQ Orbitrap: a new mass spectrometric method combining the benefits of all J. Proteome Res. 2009, 8 (10) 4743-52
-
(2009)
J. Proteome Res.
, vol.8
, Issue.10
, pp. 4743-4752
-
-
Kocher, T.1
Pichler, P.2
Schutzbier, M.3
Stingl, C.4
Kaul, A.5
Teucher, N.6
Hasenfuss, G.7
Penninger, J.M.8
Mechtler, K.9
-
13
-
-
39749146978
-
Quantitative proteomic analysis of protein complexes: Concurrent identification of interactors and their state of phosphorylation
-
Pflieger, D.; Junger, M. A.; Muller, M.; Rinner, O.; Lee, H.; Gehrig, P. M.; Gstaiger, M.; Aebersold, R. Quantitative proteomic analysis of protein complexes: concurrent identification of interactors and their state of phosphorylation Mol. Cell. Proteomics 2008, 7 (2) 326-46
-
(2008)
Mol. Cell. Proteomics
, vol.7
, Issue.2
, pp. 326-346
-
-
Pflieger, D.1
Junger, M.A.2
Muller, M.3
Rinner, O.4
Lee, H.5
Gehrig, P.M.6
Gstaiger, M.7
Aebersold, R.8
-
14
-
-
77957326091
-
Quantitative analysis of protein complex constituents and their phosphorylation states on a LTQ-Orbitrap instrument
-
Przybylski, C.; Junger, M. A.; Aubertin, J.; Radvanyi, F.; Aebersold, R.; Pflieger, D. Quantitative analysis of protein complex constituents and their phosphorylation states on a LTQ-Orbitrap instrument J. Proteome Res. 2010, 9 (10) 5118-32
-
(2010)
J. Proteome Res.
, vol.9
, Issue.10
, pp. 5118-5132
-
-
Przybylski, C.1
Junger, M.A.2
Aubertin, J.3
Radvanyi, F.4
Aebersold, R.5
Pflieger, D.6
-
15
-
-
77953015677
-
Integrating titania enrichment, iTRAQ labeling, and Orbitrap CID-HCD for global identification and quantitative analysis of phosphopeptides
-
Wu, J.; Warren, P.; Shakey, Q.; Sousa, E.; Hill, A.; Ryan, T. E.; He, T. Integrating titania enrichment, iTRAQ labeling, and Orbitrap CID-HCD for global identification and quantitative analysis of phosphopeptides Proteomics 2010, 10 (11) 2224-34
-
(2010)
Proteomics
, vol.10
, Issue.11
, pp. 2224-2234
-
-
Wu, J.1
Warren, P.2
Shakey, Q.3
Sousa, E.4
Hill, A.5
Ryan, T.E.6
He, T.7
-
16
-
-
33847782587
-
Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry
-
Molina, H.; Horn, D. M.; Tang, N.; Mathivanan, S.; Pandey, A. Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry Proc. Natl. Acad. Sci. U.S.A. 2007, 104 (7) 2199-204
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, Issue.7
, pp. 2199-2204
-
-
Molina, H.1
Horn, D.M.2
Tang, N.3
Mathivanan, S.4
Pandey, A.5
-
17
-
-
79958166701
-
Systematic evaluation of alternating CID and ETD fragmentation for phosphorylated peptides
-
Kim, M. S.; Zhong, J.; Kandasamy, K.; Delanghe, B.; Pandey, A. Systematic evaluation of alternating CID and ETD fragmentation for phosphorylated peptides Proteomics 2011, 11, 1-5
-
(2011)
Proteomics
, vol.11
, pp. 1-5
-
-
Kim, M.S.1
Zhong, J.2
Kandasamy, K.3
Delanghe, B.4
Pandey, A.5
-
18
-
-
84870893270
-
Automated phosphopeptide identification using multiple MS/MS fragmentation modes
-
Vandenbogaert, M.; Hourdel, V.; Jardin-Mathe, O.; Bigeard, J.; Bonhomme, L.; Legros, V.; Hirt, H.; Schwikowski, B.; Pflieger, D. Automated phosphopeptide identification using multiple MS/MS fragmentation modes J. Proteome Res. 2012, 11 (12) 5695-703
-
(2012)
J. Proteome Res.
, vol.11
, Issue.12
, pp. 5695-5703
-
-
Vandenbogaert, M.1
Hourdel, V.2
Jardin-Mathe, O.3
Bigeard, J.4
Bonhomme, L.5
Legros, V.6
Hirt, H.7
Schwikowski, B.8
Pflieger, D.9
-
19
-
-
79953212975
-
Confident phosphorylation site localization using the Mascot Delta Score
-
003830
-
Savitski, M. M.; Lemeer, S.; Boesche, M.; Lang, M.; Mathieson, T.; Bantscheff, M.; Kuster, B. Confident phosphorylation site localization using the Mascot Delta Score Mol. Cell. Proteomics 2011, 10 (2) M110 003830
-
(2011)
Mol. Cell. Proteomics
, vol.10
, Issue.2
, pp. 110
-
-
Savitski, M.M.1
Lemeer, S.2
Boesche, M.3
Lang, M.4
Mathieson, T.5
Bantscheff, M.6
Kuster, B.7
-
20
-
-
33749853607
-
A probability-based approach for high-throughput protein phosphorylation analysis and site localization
-
Beausoleil, S. A.; Villen, J.; Gerber, S. A.; Rush, J.; Gygi, S. P. A probability-based approach for high-throughput protein phosphorylation analysis and site localization Nat. Biotechnol. 2006, 24 (10) 1285-92
-
(2006)
Nat. Biotechnol.
, vol.24
, Issue.10
, pp. 1285-1292
-
-
Beausoleil, S.A.1
Villen, J.2
Gerber, S.A.3
Rush, J.4
Gygi, S.P.5
-
21
-
-
84869476043
-
Automated and high confidence protein phosphorylation site localization using complementary collision-activated dissociation and electron transfer dissociation tandem mass spectrometry
-
Hansen, T. A.; Sylvester, M.; Jensen, O. N.; Kjeldsen, F. Automated and high confidence protein phosphorylation site localization using complementary collision-activated dissociation and electron transfer dissociation tandem mass spectrometry Anal. Chem. 2012, 84 (22) 9694-9
-
(2012)
Anal. Chem.
, vol.84
, Issue.22
, pp. 9694-9699
-
-
Hansen, T.A.1
Sylvester, M.2
Jensen, O.N.3
Kjeldsen, F.4
-
22
-
-
33751103918
-
Comparative proteomic analysis of extracellular matrix proteins secreted by two types of skin fibroblasts
-
Pflieger, D.; Chabane, S.; Gaillard, O.; Bernard, B. A.; Ducoroy, P.; Rossier, J.; Vinh, J. Comparative proteomic analysis of extracellular matrix proteins secreted by two types of skin fibroblasts Proteomics 2006, 6 (21) 5868-79
-
(2006)
Proteomics
, vol.6
, Issue.21
, pp. 5868-5879
-
-
Pflieger, D.1
Chabane, S.2
Gaillard, O.3
Bernard, B.A.4
Ducoroy, P.5
Rossier, J.6
Vinh, J.7
-
23
-
-
0037001967
-
Rubisco: Structure, regulatory interactions, and possibilities for a better enzyme
-
Spreitzer, R. J.; Salvucci, M. E. Rubisco: structure, regulatory interactions, and possibilities for a better enzyme Annu Rev Plant Biol 2002, 53, 449-75
-
(2002)
Annu Rev Plant Biol
, vol.53
, pp. 449-475
-
-
Spreitzer, R.J.1
Salvucci, M.E.2
-
24
-
-
66649127498
-
Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks
-
Reiland, S.; Messerli, G.; Baerenfaller, K.; Gerrits, B.; Endler, A.; Grossmann, J.; Gruissem, W.; Baginsky, S. Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks Plant Physiol. 2009, 150 (2) 889-903
-
(2009)
Plant Physiol.
, vol.150
, Issue.2
, pp. 889-903
-
-
Reiland, S.1
Messerli, G.2
Baerenfaller, K.3
Gerrits, B.4
Endler, A.5
Grossmann, J.6
Gruissem, W.7
Baginsky, S.8
-
25
-
-
79961220621
-
Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF)
-
Reiland, S.; Finazzi, G.; Endler, A.; Willig, A.; Baerenfaller, K.; Grossmann, J.; Gerrits, B.; Rutishauser, D.; Gruissem, W.; Rochaix, J. D.; Baginsky, S. Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF) Proc. Natl. Acad. Sci. U.S.A. 2011, 108 (31) 12955-60
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, Issue.31
, pp. 12955-12960
-
-
Reiland, S.1
Finazzi, G.2
Endler, A.3
Willig, A.4
Baerenfaller, K.5
Grossmann, J.6
Gerrits, B.7
Rutishauser, D.8
Gruissem, W.9
Rochaix, J.D.10
Baginsky, S.11
-
26
-
-
84880628089
-
Depletion of abundant plant RuBisCO protein using the protamine sulfate precipitation method
-
Kim, Y. J.; Lee, H. M.; Wang, Y.; Wu, J.; Kim, S. G.; Kang, K. Y.; Park, K. H.; Kim, Y. C.; Choi, I. S.; Agrawal, G. K.; Rakwal, R.; Kim, S. T. Depletion of abundant plant RuBisCO protein using the protamine sulfate precipitation method Proteomics 2013, 13 (14) 2176-9
-
(2013)
Proteomics
, vol.13
, Issue.14
, pp. 2176-2179
-
-
Kim, Y.J.1
Lee, H.M.2
Wang, Y.3
Wu, J.4
Kim, S.G.5
Kang, K.Y.6
Park, K.H.7
Kim, Y.C.8
Choi, I.S.9
Agrawal, G.K.10
Rakwal, R.11
Kim, S.T.12
-
27
-
-
35649014585
-
Total protein extraction with TCA-acetone
-
Mechin, V.; Damerval, C.; Zivy, M. Total protein extraction with TCA-acetone Methods Mol. Biol. 2007, 355, 1-8
-
(2007)
Methods Mol. Biol.
, vol.355
, pp. 1-8
-
-
Mechin, V.1
Damerval, C.2
Zivy, M.3
-
28
-
-
33846269339
-
Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors
-
Swaney, D. L.; McAlister, G. C.; Wirtala, M.; Schwartz, J. C.; Syka, J. E.; Coon, J. J. Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors Anal. Chem. 2007, 79 (2) 477-85
-
(2007)
Anal. Chem.
, vol.79
, Issue.2
, pp. 477-485
-
-
Swaney, D.L.1
McAlister, G.C.2
Wirtala, M.3
Schwartz, J.C.4
Syka, J.E.5
Coon, J.J.6
-
29
-
-
56149086397
-
Decision tree-driven tandem mass spectrometry for shotgun proteomics
-
Swaney, D. L.; McAlister, G. C.; Coon, J. J. Decision tree-driven tandem mass spectrometry for shotgun proteomics Nat. Methods 2008, 5 (11) 959-64
-
(2008)
Nat. Methods
, vol.5
, Issue.11
, pp. 959-964
-
-
Swaney, D.L.1
McAlister, G.C.2
Coon, J.J.3
-
30
-
-
0141456427
-
Letter: The diagnostic value of amino acid side-chain losses in electron capture dissociation of polypeptides. Comment on: "can the (M-X) region in electron capture dissociation provide reliable information on amino acid composition of polypeptides?" Eur. J. Mass Spectrom. 8, 461-469
-
2002
-
Cooper, H. J.; Hakansson, K.; Marshall, A. G.; Hudgins, R. R.; Haselmann, K. F.; Kjeldsen, F.; Budnik, B. A.; Polfer, N. C.; Zubarev, R. A. Letter: the diagnostic value of amino acid side-chain losses in electron capture dissociation of polypeptides. Comment on: "Can the (M-X) region in electron capture dissociation provide reliable information on amino acid composition of polypeptides?" Eur. J. Mass Spectrom. 8, 461-469 Eur. J. Mass Spectrom. 2003, 9 (3) 221-2 2002
-
(2003)
Eur. J. Mass Spectrom.
, vol.9
, Issue.3
, pp. 221-222
-
-
Cooper, H.J.1
Hakansson, K.2
Marshall, A.G.3
Hudgins, R.R.4
Haselmann, K.F.5
Kjeldsen, F.6
Budnik, B.A.7
Polfer, N.C.8
Zubarev, R.A.9
-
31
-
-
70349921489
-
Proteome analysis of Sorangium cellulosum employing 2D-HPLC-MS/MS and improved database searching strategies for CID and ETD fragment spectra
-
Leinenbach, A.; Hartmer, R.; Lubeck, M.; Kneissl, B.; Elnakady, Y. A.; Baessmann, C.; Muller, R.; Huber, C. G. Proteome analysis of Sorangium cellulosum employing 2D-HPLC-MS/MS and improved database searching strategies for CID and ETD fragment spectra J. Proteome Res. 2009, 8 (9) 4350-4361
-
(2009)
J. Proteome Res.
, vol.8
, Issue.9
, pp. 4350-4361
-
-
Leinenbach, A.1
Hartmer, R.2
Lubeck, M.3
Kneissl, B.4
Elnakady, Y.A.5
Baessmann, C.6
Muller, R.7
Huber, C.G.8
-
32
-
-
75649110103
-
Statistical analysis of peptide electron transfer dissociation fragmentation mass spectrometry
-
Chalkley, R. J.; Medzihradszky, K. F.; Lynn, A. J.; Baker, P. R.; Burlingame, A. L. Statistical analysis of peptide electron transfer dissociation fragmentation mass spectrometry Anal. Chem. 2010, 82 (2) 579-84
-
(2010)
Anal. Chem.
, vol.82
, Issue.2
, pp. 579-584
-
-
Chalkley, R.J.1
Medzihradszky, K.F.2
Lynn, A.J.3
Baker, P.R.4
Burlingame, A.L.5
-
33
-
-
84879654317
-
A large synthetic peptide and phosphopeptide reference library for mass spectrometry-based proteomics
-
Marx, H.; Lemeer, S.; Schliep, J. E.; Matheron, L.; Mohammed, S.; Cox, J.; Mann, M.; Heck, A. J.; Kuster, B. A large synthetic peptide and phosphopeptide reference library for mass spectrometry-based proteomics Nat. Biotechnol. 2013, 31 (6) 557-64
-
(2013)
Nat. Biotechnol.
, vol.31
, Issue.6
, pp. 557-564
-
-
Marx, H.1
Lemeer, S.2
Schliep, J.E.3
Matheron, L.4
Mohammed, S.5
Cox, J.6
Mann, M.7
Heck, A.J.8
Kuster, B.9
-
34
-
-
80051817160
-
MassChroQ: A versatile tool for mass spectrometry quantification
-
Valot, B.; Langella, O.; Nano, E.; Zivy, M. MassChroQ: a versatile tool for mass spectrometry quantification Proteomics 2011, 11 (17) 3572-7
-
(2011)
Proteomics
, vol.11
, Issue.17
, pp. 3572-3577
-
-
Valot, B.1
Langella, O.2
Nano, E.3
Zivy, M.4
-
35
-
-
67049098592
-
Electron transfer dissociation in conjunction with collision activation to investigate the Drosophila melanogaster phosphoproteome
-
Domon, B.; Bodenmiller, B.; Carapito, C.; Hao, Z.; Huehmer, A.; Aebersold, R. Electron transfer dissociation in conjunction with collision activation to investigate the Drosophila melanogaster phosphoproteome J. Proteome Res. 2009, 8 (6) 2633-9
-
(2009)
J. Proteome Res.
, vol.8
, Issue.6
, pp. 2633-2639
-
-
Domon, B.1
Bodenmiller, B.2
Carapito, C.3
Hao, Z.4
Huehmer, A.5
Aebersold, R.6
-
36
-
-
73249138597
-
Large-scale phosphoprotein analysis in Medicago truncatula roots provides insight into in vivo kinase activity in legumes
-
Grimsrud, P. A.; den Os, D.; Wenger, C. D.; Swaney, D. L.; Schwartz, D.; Sussman, M. R.; Ane, J. M.; Coon, J. J. Large-scale phosphoprotein analysis in Medicago truncatula roots provides insight into in vivo kinase activity in legumes Plant Physiol. 2010, 152 (1) 19-28
-
(2010)
Plant Physiol.
, vol.152
, Issue.1
, pp. 19-28
-
-
Grimsrud, P.A.1
Den Os, D.2
Wenger, C.D.3
Swaney, D.L.4
Schwartz, D.5
Sussman, M.R.6
Ane, J.M.7
Coon, J.J.8
-
37
-
-
36749068401
-
Performance characteristics of electron transfer dissociation mass spectrometry
-
Good, D. M.; Wirtala, M.; McAlister, G. C.; Coon, J. J. Performance characteristics of electron transfer dissociation mass spectrometry Mol. Cell. Proteomics 2007, 6 (11) 1942-51
-
(2007)
Mol. Cell. Proteomics
, vol.6
, Issue.11
, pp. 1942-1951
-
-
Good, D.M.1
Wirtala, M.2
McAlister, G.C.3
Coon, J.J.4
-
38
-
-
59049086847
-
Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry
-
Swaney, D. L.; Wenger, C. D.; Thomson, J. A.; Coon, J. J. Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry Proc. Natl. Acad. Sci. U.S.A. 2009, 106 (4) 995-1000
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, Issue.4
, pp. 995-1000
-
-
Swaney, D.L.1
Wenger, C.D.2
Thomson, J.A.3
Coon, J.J.4
-
39
-
-
0034997845
-
Mitogen-activated protein (MAP) kinase pathways: Regulation and physiological functions
-
Pearson, G.; Robinson, F.; Beers Gibson, T.; Xu, B. E.; Karandikar, M.; Berman, K.; Cobb, M. H. Mitogen-activated protein (MAP) kinase pathways: regulation and physiological functions Endocr. Rev. 2001, 22 (2) 153-83
-
(2001)
Endocr. Rev.
, vol.22
, Issue.2
, pp. 153-183
-
-
Pearson, G.1
Robinson, F.2
Beers Gibson, T.3
Xu, B.E.4
Karandikar, M.5
Berman, K.6
Cobb, M.H.7
-
40
-
-
84870705857
-
Constitutively active mitogen-activated protein kinase versions reveal functions of Arabidopsis MPK4 in pathogen defense signaling
-
Berriri, S.; Garcia, A. V.; Dit Frey, N. F.; Rozhon, W.; Pateyron, S.; Leonhardt, N.; Montillet, J. L.; Leung, J.; Hirt, H.; Colcombet, J. Constitutively active mitogen-activated protein kinase versions reveal functions of Arabidopsis MPK4 in pathogen defense signaling Plant Cell 2012, 24 (10) 4281-93
-
(2012)
Plant Cell
, vol.24
, Issue.10
, pp. 4281-4293
-
-
Berriri, S.1
Garcia, A.V.2
Dit Frey, N.F.3
Rozhon, W.4
Pateyron, S.5
Leonhardt, N.6
Montillet, J.L.7
Leung, J.8
Hirt, H.9
Colcombet, J.10
-
41
-
-
33646468623
-
Phosphorylation of the Pro-X-Thr-Pro site in phosphatase inhibitor-2 by cyclin-dependent protein kinase during M-phase of the cell cycle
-
Li, M.; Stefansson, B.; Wang, W.; Schaefer, E. M.; Brautigan, D. L. Phosphorylation of the Pro-X-Thr-Pro site in phosphatase inhibitor-2 by cyclin-dependent protein kinase during M-phase of the cell cycle Cell. Signalling 2006, 18 (8) 1318-26
-
(2006)
Cell. Signalling
, vol.18
, Issue.8
, pp. 1318-1326
-
-
Li, M.1
Stefansson, B.2
Wang, W.3
Schaefer, E.M.4
Brautigan, D.L.5
-
42
-
-
84874092435
-
Identification of novel in vivo MAP kinase substrates in Arabidopsis thaliana through use of tandem metal oxide affinity chromatography
-
Hoehenwarter, W.; Thomas, M.; Nukarinen, E.; Egelhofer, V.; Rohrig, H.; Weckwerth, W.; Conrath, U.; Beckers, G. J. Identification of novel in vivo MAP kinase substrates in Arabidopsis thaliana through use of tandem metal oxide affinity chromatography Mol. Cell. Proteomics 2012, 12 (2) 369-80
-
(2012)
Mol. Cell. Proteomics
, vol.12
, Issue.2
, pp. 369-380
-
-
Hoehenwarter, W.1
Thomas, M.2
Nukarinen, E.3
Egelhofer, V.4
Rohrig, H.5
Weckwerth, W.6
Conrath, U.7
Beckers, G.J.8
-
43
-
-
84872076923
-
Phosphorylation and stabilization of Arabidopsis MAP kinase phosphatase 1 in response to UV-B stress
-
Gonzalez Besteiro, M. A.; Ulm, R. Phosphorylation and stabilization of Arabidopsis MAP kinase phosphatase 1 in response to UV-B stress J. Biol. Chem. 2013, 288 (1) 480-6
-
(2013)
J. Biol. Chem.
, vol.288
, Issue.1
, pp. 480-486
-
-
Gonzalez Besteiro, M.A.1
Ulm, R.2
-
44
-
-
49849088762
-
Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis
-
de la Fuente van Bentem, S.; Anrather, D.; Dohnal, I.; Roitinger, E.; Csaszar, E.; Joore, J.; Buijnink, J.; Carreri, A.; Forzani, C.; Lorkovic, Z. J.; Barta, A.; Lecourieux, D.; Verhounig, A.; Jonak, C.; Hirt, H. Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis J. Proteome Res. 2008, 7 (6) 2458-70
-
(2008)
J. Proteome Res.
, vol.7
, Issue.6
, pp. 2458-2470
-
-
De La Fuente Van Bentem, S.1
Anrather, D.2
Dohnal, I.3
Roitinger, E.4
Csaszar, E.5
Joore, J.6
Buijnink, J.7
Carreri, A.8
Forzani, C.9
Lorkovic, Z.J.10
Barta, A.11
Lecourieux, D.12
Verhounig, A.13
Jonak, C.14
Hirt, H.15
-
45
-
-
79960966261
-
Arabidopsis thaliana MAP65-1 and MAP65-2 function redundantly with MAP65-3/PLEIADE in cytokinesis downstream of MPK4
-
Sasabe, M.; Kosetsu, K.; Hidaka, M.; Murase, A.; Machida, Y. Arabidopsis thaliana MAP65-1 and MAP65-2 function redundantly with MAP65-3/PLEIADE in cytokinesis downstream of MPK4 Plant Signaling Behav. 2011, 6 (5) 743-7
-
(2011)
Plant Signaling Behav.
, vol.6
, Issue.5
, pp. 743-747
-
-
Sasabe, M.1
Kosetsu, K.2
Hidaka, M.3
Murase, A.4
Machida, Y.5
-
46
-
-
21744457120
-
Plants, symbiosis and parasites: A calcium signalling connection
-
Harper, J. F.; Harmon, A. Plants, symbiosis and parasites: a calcium signalling connection Nat. Rev. Mol. Cell. Biol. 2005, 6 (7) 555-66
-
(2005)
Nat. Rev. Mol. Cell. Biol.
, vol.6
, Issue.7
, pp. 555-566
-
-
Harper, J.F.1
Harmon, A.2
-
47
-
-
23044508877
-
The MAP kinase substrate MKS1 is a regulator of plant defense responses
-
Andreasson, E.; Jenkins, T.; Brodersen, P.; Thorgrimsen, S.; Petersen, N. H.; Zhu, S.; Qiu, J. L.; Micheelsen, P.; Rocher, A.; Petersen, M.; Newman, M. A.; Bjorn Nielsen, H.; Hirt, H.; Somssich, I.; Mattsson, O.; Mundy, J. The MAP kinase substrate MKS1 is a regulator of plant defense responses EMBO J. 2005, 24 (14) 2579-89
-
(2005)
EMBO J.
, vol.24
, Issue.14
, pp. 2579-2589
-
-
Andreasson, E.1
Jenkins, T.2
Brodersen, P.3
Thorgrimsen, S.4
Petersen, N.H.5
Zhu, S.6
Qiu, J.L.7
Micheelsen, P.8
Rocher, A.9
Petersen, M.10
Newman, M.A.11
Bjorn Nielsen, H.12
Hirt, H.13
Somssich, I.14
Mattsson, O.15
Mundy, J.16
-
48
-
-
84861844847
-
Structural and functional analysis of VQ motif-containing proteins in Arabidopsis as interacting proteins of WRKY transcription factors
-
Cheng, Y.; Zhou, Y.; Yang, Y.; Chi, Y. J.; Zhou, J.; Chen, J. Y.; Wang, F.; Fan, B.; Shi, K.; Zhou, Y. H.; Yu, J. Q.; Chen, Z. Structural and functional analysis of VQ motif-containing proteins in Arabidopsis as interacting proteins of WRKY transcription factors Plant Physiol. 2012, 159 (2) 810-25
-
(2012)
Plant Physiol.
, vol.159
, Issue.2
, pp. 810-825
-
-
Cheng, Y.1
Zhou, Y.2
Yang, Y.3
Chi, Y.J.4
Zhou, J.5
Chen, J.Y.6
Wang, F.7
Fan, B.8
Shi, K.9
Zhou, Y.H.10
Yu, J.Q.11
Chen, Z.12
-
49
-
-
33744992478
-
TOPLESS regulates apical embryonic fate in Arabidopsis
-
Long, J. A.; Ohno, C.; Smith, Z. R.; Meyerowitz, E. M. TOPLESS regulates apical embryonic fate in Arabidopsis Science 2006, 312 (5779) 1520-3
-
(2006)
Science
, vol.312
, Issue.5779
, pp. 1520-1523
-
-
Long, J.A.1
Ohno, C.2
Smith, Z.R.3
Meyerowitz, E.M.4
-
50
-
-
40449131628
-
TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis
-
Szemenyei, H.; Hannon, M.; Long, J. A. TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis Science 2008, 319 (5868) 1384-6
-
(2008)
Science
, vol.319
, Issue.5868
, pp. 1384-1386
-
-
Szemenyei, H.1
Hannon, M.2
Long, J.A.3
-
51
-
-
77950439369
-
NINJA connects the co-repressor TOPLESS to jasmonate signalling
-
Pauwels, L.; Barbero, G. F.; Geerinck, J.; Tilleman, S.; Grunewald, W.; Perez, A. C.; Chico, J. M.; Bossche, R. V.; Sewell, J.; Gil, E.; Garcia-Casado, G.; Witters, E.; Inze, D.; Long, J. A.; De Jaeger, G.; Solano, R.; Goossens, A. NINJA connects the co-repressor TOPLESS to jasmonate signalling Nature 2010, 464 (7289) 788-91
-
(2010)
Nature
, vol.464
, Issue.7289
, pp. 788-791
-
-
Pauwels, L.1
Barbero, G.F.2
Geerinck, J.3
Tilleman, S.4
Grunewald, W.5
Perez, A.C.6
Chico, J.M.7
Bossche, R.V.8
Sewell, J.9
Gil, E.10
Garcia-Casado, G.11
Witters, E.12
Inze, D.13
Long, J.A.14
De Jaeger, G.15
Solano, R.16
Goossens, A.17
-
52
-
-
84872180375
-
Arabidopsis Pumilio protein APUM5 suppresses Cucumber mosaic virus infection via direct binding of viral RNAs
-
Huh, S. U.; Kim, M. J.; Paek, K. H. Arabidopsis Pumilio protein APUM5 suppresses Cucumber mosaic virus infection via direct binding of viral RNAs Proc. Natl. Acad. Sci. U.S.A. 2013, 110 (2) 779-84
-
(2013)
Proc. Natl. Acad. Sci. U.S.A.
, vol.110
, Issue.2
, pp. 779-784
-
-
Huh, S.U.1
Kim, M.J.2
Paek, K.H.3
-
53
-
-
84877095677
-
Role of Arabidopsis Pumilio RNA binding protein 5 in virus infection
-
Un Huh, S.; Paek, K. H., Role of Arabidopsis Pumilio RNA binding protein 5 in virus infection. Plant Signaling Behav. 2013, 8, (5).
-
(2013)
Plant Signaling Behav.
, vol.8
, Issue.5
-
-
Un Huh, S.1
Paek, K.H.2
-
54
-
-
34250155674
-
Identification and characterization of RED120: A conserved PWI domain protein with links to splicing and 3′-end formation
-
Fortes, P.; Longman, D.; McCracken, S.; Ip, J. Y.; Poot, R.; Mattaj, I. W.; Caceres, J. F.; Blencowe, B. J. Identification and characterization of RED120: a conserved PWI domain protein with links to splicing and 3′-end formation FEBS Lett. 2007, 581 (16) 3087-97
-
(2007)
FEBS Lett.
, vol.581
, Issue.16
, pp. 3087-3097
-
-
Fortes, P.1
Longman, D.2
McCracken, S.3
Ip, J.Y.4
Poot, R.5
Mattaj, I.W.6
Caceres, J.F.7
Blencowe, B.J.8
-
55
-
-
57749104148
-
Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes
-
Zhang, Y.; Feng, S.; Chen, F.; Chen, H.; Wang, J.; McCall, C.; Xiong, Y.; Deng, X. W. Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes Plant Cell 2008, 20 (6) 1437-55
-
(2008)
Plant Cell
, vol.20
, Issue.6
, pp. 1437-1455
-
-
Zhang, Y.1
Feng, S.2
Chen, F.3
Chen, H.4
Wang, J.5
McCall, C.6
Xiong, Y.7
Deng, X.W.8
-
56
-
-
84866904177
-
The Cyclase-associated protein Cap1 is important for proper regulation of infection-related morphogenesis in Magnaporthe oryzae
-
Zhou, X.; Zhang, H.; Li, G.; Shaw, B.; Xu, J. R. The Cyclase-associated protein Cap1 is important for proper regulation of infection-related morphogenesis in Magnaporthe oryzae PLoS Pathog. 2012, 8 (9) e1002911
-
(2012)
PLoS Pathog.
, vol.8
, Issue.9
, pp. 1002911
-
-
Zhou, X.1
Zhang, H.2
Li, G.3
Shaw, B.4
Xu, J.R.5
-
57
-
-
49849084863
-
A novel nucleocytoplasmic traffic GTPase identified as a functional target of the bipartite geminivirus nuclear shuttle protein
-
Carvalho, C. M.; Fontenelle, M. R.; Florentino, L. H.; Santos, A. A.; Zerbini, F. M.; Fontes, E. P. A novel nucleocytoplasmic traffic GTPase identified as a functional target of the bipartite geminivirus nuclear shuttle protein Plant J. 2008, 55 (5) 869-80
-
(2008)
Plant J.
, vol.55
, Issue.5
, pp. 869-880
-
-
Carvalho, C.M.1
Fontenelle, M.R.2
Florentino, L.H.3
Santos, A.A.4
Zerbini, F.M.5
Fontes, E.P.6
-
58
-
-
57749083388
-
The plant TPX2 protein regulates prospindle assembly before nuclear envelope breakdown
-
Vos, J. W.; Pieuchot, L.; Evrard, J. L.; Janski, N.; Bergdoll, M.; de Ronde, D.; Perez, L. H.; Sardon, T.; Vernos, I.; Schmit, A. C. The plant TPX2 protein regulates prospindle assembly before nuclear envelope breakdown Plant Cell 2008, 20 (10) 2783-97
-
(2008)
Plant Cell
, vol.20
, Issue.10
, pp. 2783-2797
-
-
Vos, J.W.1
Pieuchot, L.2
Evrard, J.L.3
Janski, N.4
Bergdoll, M.5
De Ronde, D.6
Perez, L.H.7
Sardon, T.8
Vernos, I.9
Schmit, A.C.10
-
59
-
-
84857971126
-
Arabidopsis VILLIN2 and VILLIN3 are required for the generation of thick actin filament bundles and for directional organ growth
-
van der Honing, H. S.; Kieft, H.; Emons, A. M.; Ketelaar, T. Arabidopsis VILLIN2 and VILLIN3 are required for the generation of thick actin filament bundles and for directional organ growth Plant Physiol. 2012, 158 (3) 1426-38
-
(2012)
Plant Physiol.
, vol.158
, Issue.3
, pp. 1426-1438
-
-
Van Der Honing, H.S.1
Kieft, H.2
Emons, A.M.3
Ketelaar, T.4
-
60
-
-
84866133202
-
Arabidopsis VILLIN2 and VILLIN3 act redundantly in sclerenchyma development via bundling of actin filaments
-
Bao, C.; Wang, J.; Zhang, R.; Zhang, B.; Zhang, H.; Zhou, Y.; Huang, S. Arabidopsis VILLIN2 and VILLIN3 act redundantly in sclerenchyma development via bundling of actin filaments Plant J. 2012, 71 (6) 962-75
-
(2012)
Plant J.
, vol.71
, Issue.6
, pp. 962-975
-
-
Bao, C.1
Wang, J.2
Zhang, R.3
Zhang, B.4
Zhang, H.5
Zhou, Y.6
Huang, S.7
-
61
-
-
84867168886
-
Phosphoproteome dynamics upon changes in plant water status reveal early events associated with rapid growth adjustment in maize leaves
-
Bonhomme, L.; Valot, B.; Tardieu, F.; Zivy, M. Phosphoproteome dynamics upon changes in plant water status reveal early events associated with rapid growth adjustment in maize leaves Mol. Cell. Proteomics 2012, 11 (10) 957-72
-
(2012)
Mol. Cell. Proteomics
, vol.11
, Issue.10
, pp. 957-972
-
-
Bonhomme, L.1
Valot, B.2
Tardieu, F.3
Zivy, M.4
-
62
-
-
79960225328
-
Arabidopsis MAP kinase phosphatase 1 is phosphorylated and activated by its substrate AtMPK6
-
Park, H. C.; Song, E. H.; Nguyen, X. C.; Lee, K.; Kim, K. E.; Kim, H. S.; Lee, S. M.; Kim, S. H.; Bae, D. W.; Yun, D. J.; Chung, W. S. Arabidopsis MAP kinase phosphatase 1 is phosphorylated and activated by its substrate AtMPK6 Plant Cell Rep. 2011, 30 (8) 1523-31
-
(2011)
Plant Cell Rep.
, vol.30
, Issue.8
, pp. 1523-1531
-
-
Park, H.C.1
Song, E.H.2
Nguyen, X.C.3
Lee, K.4
Kim, K.E.5
Kim, H.S.6
Lee, S.M.7
Kim, S.H.8
Bae, D.W.9
Yun, D.J.10
Chung, W.S.11
-
63
-
-
84883262226
-
Arabidopsis PPP family of serine/threonine protein phosphatases: Many targets but few engines
-
Uhrig, R. G.; Labandera, A. M.; Moorhead, G. B. Arabidopsis PPP family of serine/threonine protein phosphatases: many targets but few engines Trends Plant Sci. 2013, 18 (9) 505-513
-
(2013)
Trends Plant Sci.
, vol.18
, Issue.9
, pp. 505-513
-
-
Uhrig, R.G.1
Labandera, A.M.2
Moorhead, G.B.3
|