Caprine arthritis encephalitis virus detection in blood by loop-mediated isothermal amplification (LAMP) assay targeting the proviral gag region

Diagnostic Microbiology and Infectious Disease

Volumn 79, Issue 1, 2014, Pages 37-42

  Balbin, Michelle M ^a   Belotindos, Lawrence P ^a   Abes, Nancy S ^a   Mingala, Claro N ^a  

^a Science City of Munoz   (Philippines)

Author keywords

Caprine arthritis encephalitis virus; Gag gene region; Loop mediated isothermal amplification; Nested PCR

Indexed keywords

DYE; GAG PROTEIN;

AGAR GEL ELECTROPHORESIS; AMPLICON; ANIMAL CELL; ARTICLE; BLOOD ANALYSIS; CAPRINE ARTHRITIS ENCEPHALITIS VIRUS; GENE TARGETING; GROUP SPECIFIC ANTIGEN GENE; INCUBATION TIME; INTERMETHOD COMPARISON; LOOP MEDIATED ISOTHERMAL AMPLIFICATION; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROVIRUS; SENSITIVITY ANALYSIS; SPECIES DIFFERENCE; TEMPERATURE MEASUREMENT; VIRUS DETECTION; VIRUS GENE; ANIMAL; GENETICS; GOAT; ISOLATION AND PURIFICATION; LENTIVIRUS INFECTIONS; NUCLEIC ACID AMPLIFICATION; PROCEDURES; VIROLOGY;

ANIMALS; ARTHRITIS-ENCEPHALITIS VIRUS, CAPRINE; ELECTROPHORESIS, AGAR GEL; GENE PRODUCTS, GAG; GOATS; LENTIVIRUS INFECTIONS; NUCLEIC ACID AMPLIFICATION TECHNIQUES;

EID: 84898461246     PISSN: 07328893     EISSN: 18790070     Source Type: Journal    
DOI: 10.1016/j.diagmicrobio.2013.12.012     Document Type: Article

References (41)

1. Abelson M.L., Schoborg R.V. Characterization of the caprine arthritis encephalitis virus (CAEV) rev N-terminal elements required for efficient interaction with the RRE. Virus Res 2003, 92:23-35.
2. Ali Al Ahmad M.Z., Fieni F., Pellerin J.L., Guiguen F., Cherel Y., Chatagnon G., et al. Detection of viral genomes of caprine arthritis-encephalitis virus (CAEV) in semen and in genital tract tissues of male goats. Theriogenology 2008, 69:473-480.
3. Ali Al Ahmad M.Z., Dubreil L., Chatagnon G., Khayli Z., Therst M., Martignat L., et al. Goat uterine epithelial cells are susceptible to infection with caprine arthritis encephalitis virus (CAE-V) in vivo. Vet Res 2012, 43:1-7.
4. APHIS 2008. Caprine Arthritis Encephalitis Virus. 2008. Animal and Plant Health Inspection Service, United States Department of Agriculture.
5. Brinkhof J.M.A., Van Maanen C., Wigger R., Peterson K., Houwers D.J. Specific detection of small ruminant lentiviral nucleic acid sequences located in the proviral long terminal repeat and leader gag regions using real-time polymerase chain reaction. J Virol Methods 2008, 147:338-344.
6. Caprine Arthritis Encephalitis, Small Ruminant lentivirus Infection. 2007. The Center for Food Security and Public Health. College of Veterinary Medicine, Iowa State University, Ames, Iowa 50011.
7. Clements J., Zink C. Molecular biology and pathogenesis of animal lentivirus infections. Clin Microbiol Rev 1996, 9:100-117.
8. Cruz J.C.M., Gouveia A.M.G., Souza K.C., Braz G.F., Texeira B.M., Heinemann M.B., et al. Caprine arthritis-encephalitis virus (CAEV) detection in semen of endangered goat breeds by nested polymerase chain reaction. Small Rumin Res 2009, 85:149-152.
9. DA-AO 17. Department of Agriculture Administrative Order No. 17, Series of 2004. Philippines.
10. Fukuda S., Takao S., Kuwayama M., Shimazu Y., Miyazaki K. Rapid detection of Norovirus from fecal specimens by real-time reverse transcription-loop-mediated isothermal amplification assay. J Clin Microbiol 2006, 44:1376-1381.
11. Gjerset B., Storset A.K., Rimstad E. Genetic diversity of small ruminant lentiviruses: characterization of Norweigian isolates of caprine arthritis encephalitis virus. J Gen Virol 2006, 87:573-580.
12. Gomez-Lucia E., Rowe J., Collar C., Murphy B. Diversity of caprine arthritis encephalitis virus promoters isolated from goat milk and passaged in-vitro. Vet J 2013, 196:431-438.
13. Gonzales J.V.C., Domingo C.Y.J., Abes N.S., Gutierrez C.A., Villanueva M.A., Mingala C.N. Concordance of competitive enzyme linked immunosorbent assay and nested-polymerase chain reaction in the detection of caprine arthritis-encephalitis virus. Small Rumin Res 2013, 115(1):134-139.
14. Herrmann-Hoesing L.M. Diagnostic assays used to control small ruminant lentiviruses. J Vet Diagn Invest 2010, 22:843-855.
15. Huang J., Sun Y., Liu Y., Xiao H., Zhuang S. Development of a loop-mediated isothermal amplification method for rapid detection of caprine arthritis-encephalitis virus proviral DNA. Arch Virol 2012, 157:1463-1469.
16. ICTV 2012. Virus Taxonomy: 2012. International Committee on Taxonomy of Viruses, Virology Division-IUMS.
17. Iwamoto T., Sonobe T., Hayashi K. Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis complex, M. avium, and M. intracellulare in sputum samples. J Clin Microbiol 2003, 41(6):2616-2622.
18. Kaba J., Rola M., Materniak M., Nowicki M. Isolation and characterization of caprine arthritis encephalitis virus in goats from Poland. Pol J Vet Sci 2009, 12:183-188.
19. Konishi M., Tsuduku S., Haritani M., Murakami K., Tsuboi T., Kobayashi C., et al. An epidemic of caprine arthritis encephalitis in Japan: isolation of the virus. J Vet Med Sci 2004, 66:911-917.
20. L'Homme Y., Ourdan M., Leuesque V., Bertoni G., Simard C., Pisoni G. Molecular characterisation and phylogenetic analysis of small ruminant lentiviruses isolated from Canadian sheep and goats. Virol J 2011, 8:1-7.
21. Leitner G., Silanikove N., Merin U. Estimate of milk and curd yield loss of sheep and goats with intramammary infection and its relation to somatic cell count. Small Rumin Res 2008, 74:221-225.
22. Lluz A., Orais A., Dumilon R., Cerbito W. First detection of caprine arthritis encephalitis infection in goats using ELISA test in Eastern Visayas, Philippines. Philipp J Vet Anim Sci 2011, 37:159-166.
23. Le Roux C.A., Kubo T., Grobbelaar A., Jansen van Vuren P., Weyer J., Nel L.H., et al. Development and evaluation of a real-time reverse transcription loop-mediated isothermal amplification assay for rapid detection of Rift Valley fever virus in clinical specimens. J Clin Microbiol 2009, 47(3):645-651.
24. Miller R.J., Cairns J.S., Bridges S., Sarver N. Human immunodeficiency virus and AIDS: insight from animal lentivirus. J Virol 2000, 74:7187-7195.
25. Mitarai S., Okumura M., Toyota E., Yoshiyama T., Aono A., Sejimo A., et al. Evaluation of a simple loop-mediated isothermal amplification kit for the diagnosis of tuberculosis. Int J Tuberc Lung Dis 2011, 15(9):1211-1217.
26. Mori Y., Nagamine K., Tomita N., Notomi T. Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation. Biochem Biophys Res Commun 2001, 289:150-154.
27. Negamine K., Hase T., Notomi T. Accelerated reaction by loop-mediated isothermal amplification using loop primers. Mol Cell Probes 2002, 16:223-229.
28. Notomi T., Okayama H., Masubuchi H., Yonekawa T., Watanabe K., Amino N., et al. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res 2000, 28:e63.
29. Office International des Epizootes (OIE) Caprine arthritis-encephalitis and maedi-visna. OIE Terrestrial Manual 2008, 2008.
30. Parida M.M., Santhosh S.R., Dash P.K., Tripathi N.K., Saxena P., Ambuj S., et al. Development and evaluation of reverse transcription loop mediated isothermal amplification for rapid and PVL, real-time detection of Japanese encephalitis virus. J Clin Microbiol 2006, 44:4172-4178.
31. Parida M., Sannarangaiah S., Dash P.K., Rao P.V., Morita K. Loop mediated isothermal amplification (LAMP): a new generation of innovative gene amplification technique; perspectives in clinical diagnosis of infectious diseases. Rev Med Virol 2008, 18:407-421.
32. PCAARRD, 2011. Philippine goat inventory by farm type and geolocation in the Philippines, 2007-2011. Philippine Council for Agriculture, Aquatic and Natural Resources Research and Development. Philippines.
33. Peng Y., Xie Z., Liu J., Pang Y., Deng X., Xie Z., et al. Visual detection of H3 subtype avian influenza viruses by reverse transcription loop-mediated isothermal amplification. Virol J 2011, 8:337.
34. Pisoni G., Bertoni G., Puricelli M., Macalli M., Moroni P. Demonstration of coinfection with and recombination by caprine arthritis encephalitis virus and maedi-visna virus in naturally infected goats. J Virol 2007, 81:4948-4955.
35. Ramirez H., Reina R., Bertolotti L., Cenoz A., Hernandez M.M., San Roman B., et al. Study of compartmentalization in the visna clinical form of small ruminant lentivirus. BMC Vet Res 2012, 8:1-12.
36. Reddy P.G., Sapp W.J., Heneine W. Detection of caprine arthritis encephalitis virus by polymerase chain reaction. J Clin Microbiol 1993, 31:3042-3043.
37. Ren X., Li P. Development of reverse transcription loop-mediated isothermal amplification for rapid detection of porcine epidemic diarrhea virus. Virus Genes 2011, 42:229-235.
38. Smith M.C., Sherman D.M. Goat medicine 2009, 96-106. Wiley and Blackwell, Iowa, USA. 2nd ed.
39. Song L., Li J., Hou S., Li X., Chen S. Establishment of loop-mediated isothermal amplification (LAMP) for rapid detection of Brucella spp. and application to milk and blood samples. J Microbiol Methods 2012, 90:292-297.
40. Thekisoe O.M., Bazie R.S.B., Coronel-Servian A.M., Sugimoto C., Kawazu S., Inoue N. Stability of loop-mediated isothermal amplification (LAMP) reagents and its amplification efficiency on crude trypanosome DNA Templates. J Vet Med Sci 2009, 71(4):471-475.
41. Villoria M., Leginagoikoa I., Lujan L., Perez M., Salazar E., Berriakia E., et al. Detection of small ruminant lentivirus in environmental sample of air and water. Small Rumin Res 2013, 110:155-160.