메뉴 건너뛰기




Volumn 29, Issue 3, 2014, Pages 135-141

Small nucleolar RNA host genes and long non-coding RNA responses in directly irradiated and bystander cells

Author keywords

bystander effect; long non coding RNA; non coding RNA; radiation effects; snoRNA; TK6 cells

Indexed keywords

LONG UNTRANSLATED RNA; SMALL NUCLEOLAR RNA;

EID: 84896994981     PISSN: 10849785     EISSN: 15578852     Source Type: Journal    
DOI: 10.1089/cbr.2013.1574     Document Type: Article
Times cited : (21)

References (49)
  • 1
    • 0026454677 scopus 로고
    • Induction of sister chromatid exchanges by extremely low doses of alpha-particles
    • Nagasawa H, Little JB. Induction of sister chromatid exchanges by extremely low doses of alpha-particles. Cancer Res 1992;52:6394.
    • (1992) Cancer Res , vol.52 , pp. 6394
    • Nagasawa, H.1    Little, J.B.2
  • 2
    • 0030898609 scopus 로고    scopus 로고
    • Medium from irradiated human epithelial cells but not human fibroblasts reduces the clo-nogenic survival of unirradiated cells
    • Mothersill C, Seymour C. Medium from irradiated human epithelial cells but not human fibroblasts reduces the clo-nogenic survival of unirradiated cells. Int J Radiat Biol 1997;71:421.
    • (1997) Int J Radiat Biol , vol.71 , pp. 421
    • Mothersill, C.1    Seymour, C.2
  • 3
    • 0037206597 scopus 로고    scopus 로고
    • Bystander effect for chromosomal aberrations induced in wild-type and repair deficient CHO cells by low fluences of alpha particles
    • Nagasawa H, Little J. Bystander effect for chromosomal aberrations induced in wild-type and repair deficient CHO cells by low fluences of alpha particles. Mutat Res 2002;508:121.
    • (2002) Mutat Res , vol.508 , pp. 121
    • Nagasawa, H.1    Little, J.2
  • 4
    • 39749107193 scopus 로고    scopus 로고
    • Deficiencies of double-strand break repair factors and effects on mutagenesis in directly gamma-irradiated and medium-mediated bystander human lymphoblastoid cells
    • Zhang Y, Zhou J, Held KD, et al. Deficiencies of double-strand break repair factors and effects on mutagenesis in directly gamma-irradiated and medium-mediated bystander human lymphoblastoid cells. Radiat Res 2008;169:197.
    • (2008) Radiat Res , vol.169 , pp. 197
    • Zhang, Y.1    Zhou, J.2    Held, K.D.3
  • 5
    • 0036736438 scopus 로고    scopus 로고
    • Nitric oxide-mediated bystander effect induced by heavy-ions in human salivary gland tumour cells
    • Shao C, Furusawa Y, Aoki M, et al. Nitric oxide-mediated bystander effect induced by heavy-ions in human salivary gland tumour cells. Int J Radiat Biol 2002;78:837.
    • (2002) Int J Radiat Biol , vol.78 , pp. 837
    • Shao, C.1    Furusawa, Y.2    Aoki, M.3
  • 6
    • 70350303361 scopus 로고    scopus 로고
    • Ionizing radiation-induced bystander mutagenesis and adaptation: Quantitative and temporal aspects
    • Zhang Y, Zhou J, Baldwin J, et al. Ionizing radiation-induced bystander mutagenesis and adaptation: Quantitative and temporal aspects. Mutat Res 2009;671:20.
    • (2009) Mutat Res , vol.671 , pp. 20
    • Zhang, Y.1    Zhou, J.2    Baldwin, J.3
  • 7
    • 33646037641 scopus 로고    scopus 로고
    • Bystander effect: Biological endpoints and microarray analysis
    • Chaudhry MA. Bystander effect: Biological endpoints and microarray analysis. Mutat Res 2006;597:98.
    • (2006) Mutat Res , vol.597 , pp. 98
    • Chaudhry, M.A.1
  • 8
    • 77951941837 scopus 로고    scopus 로고
    • Bystander effects induced by chemicals and ionizing radiation: Evaluation of changes in gene expression of downstream MAPK targets
    • Asur R, Balasubramaniam M, Marples B, et al. Bystander effects induced by chemicals and ionizing radiation: Evaluation of changes in gene expression of downstream MAPK targets. Mutagenesis 2010;25:271.
    • (2010) Mutagenesis , vol.25 , pp. 271
    • Asur, R.1    Balasubramaniam, M.2    Marples, B.3
  • 9
    • 80054711650 scopus 로고    scopus 로고
    • Mitochondrial gene expression in directly irradiated and nonirradiated bystander cells
    • Chaudhry MA, Omaruddin RA. Mitochondrial gene expression in directly irradiated and nonirradiated bystander cells. Cancer Biother Radiopharm 2011;26:657.
    • (2011) Cancer Biother Radiopharm , vol.26 , pp. 657
    • Chaudhry, M.A.1    Omaruddin, R.A.2
  • 10
    • 77249135874 scopus 로고    scopus 로고
    • Lack of evidence for low-LET radiation induced bystander response in normal human fibroblasts and colon carcinoma cells
    • Sowa MB, Goetz W, Baulch JE, et al. Lack of evidence for low-LET radiation induced bystander response in normal human fibroblasts and colon carcinoma cells. Int J Radiat Biol 2010;86:102.
    • (2010) Int J Radiat Biol , vol.86 , pp. 102
    • Sowa, M.B.1    Goetz, W.2    Baulch, J.E.3
  • 11
    • 16444382297 scopus 로고    scopus 로고
    • Medium-mediated intercellular communication is involved in bystander responses of X-ray-irradiated normal human fibroblasts
    • Yang H, Asaad N, Held KD. Medium-mediated intercellular communication is involved in bystander responses of X-ray-irradiated normal human fibroblasts. Oncogene 2005; 24:2096.
    • (2005) Oncogene , vol.24 , pp. 2096
    • Yang, H.1    Asaad, N.2    Held, K.D.3
  • 12
    • 0031674026 scopus 로고    scopus 로고
    • Studies of bystander effects in human fibroblasts using a charged particle microbeam
    • Prise KM, Belyakov OV, Folkard M, et al. Studies of bystander effects in human fibroblasts using a charged particle microbeam. Int J Radiat Biol 1998;74:793.
    • (1998) Int J Radiat Biol , vol.74 , pp. 793
    • Prise, K.M.1    Belyakov, O.V.2    Folkard, M.3
  • 13
    • 0036023755 scopus 로고    scopus 로고
    • Bystander effects: Intercellular transmission of radiation damage signals
    • Little JB, Azzam EI, de Toledo SM, et al. Bystander effects: Intercellular transmission of radiation damage signals. Radiat Prot Dosimetry 2002;99:159.
    • (2002) Radiat Prot Dosimetry , vol.99 , pp. 159
    • Little, J.B.1    Azzam, E.I.2    De Toledo, S.M.3
  • 14
    • 60849084904 scopus 로고    scopus 로고
    • Real-time PCR analysis of micro-RNA expression in ionizing radiation-treated cells
    • Chaudhry MA. Real-time PCR analysis of micro-RNA expression in ionizing radiation-treated cells. Cancer Bio-ther Radiopharm 2009;24:49.
    • (2009) Cancer Bio-ther Radiopharm , vol.24 , pp. 49
    • Chaudhry, M.A.1
  • 15
    • 84888244166 scopus 로고    scopus 로고
    • Identification of radiation-induced microRNA transcriptome by next-generation massively parallel sequencing
    • Chaudhry MA, Omaruddin RA, Brumbaugh CD, et al. Identification of radiation-induced microRNA transcriptome by next-generation massively parallel sequencing. J Radiat Res 2013;54:808.
    • (2013) J Radiat Res , vol.54 , pp. 808
    • Chaudhry, M.A.1    Omaruddin, R.A.2    Brumbaugh, C.D.3
  • 16
    • 77956390556 scopus 로고    scopus 로고
    • Radiation-induced micro-RNA modulation in glioblastoma cells differing in DNA-repair pathways
    • Chaudhry MA, Sachdeva H, Omaruddin RA. Radiation-induced micro-RNA modulation in glioblastoma cells differing in DNA-repair pathways. DNA Cell Biol 2010; 29:553.
    • (2010) DNA Cell Biol , vol.29 , pp. 553
    • Chaudhry, M.A.1    Sachdeva, H.2    Omaruddin, R.A.3
  • 17
    • 84873728434 scopus 로고    scopus 로고
    • Differential regulation of microRNA expression in irradiated and bystander cells
    • Chaudhry MA, Omaruddin RA. Differential regulation of microRNA expression in irradiated and bystander cells. Mol Biol 2012;46:634.
    • (2012) Mol Biol , vol.46 , pp. 634
    • Chaudhry, M.A.1    Omaruddin, R.A.2
  • 18
    • 84866113589 scopus 로고    scopus 로고
    • Interactome of radiation-induced microRNA-predicted target genes
    • Lhakhang TW, Chaudhry MA. Interactome of radiation-induced microRNA-predicted target genes. Comp Funct Genomics 2012;2012:569731.
    • (2012) Comp Funct Genomics , vol.2012 , pp. 569731
    • Lhakhang, T.W.1    Chaudhry, M.A.2
  • 19
    • 80053574876 scopus 로고    scopus 로고
    • From snoRNA to miRNA: Dual function regulatory non-coding RNAs
    • Scott MS, Ono M. From snoRNA to miRNA: Dual function regulatory non-coding RNAs. Biochimie 2011;93:1987.
    • (2011) Biochimie , vol.93 , pp. 1987
    • Scott, M.S.1    Ono, M.2
  • 20
    • 79958274671 scopus 로고    scopus 로고
    • An introduction to small non-coding RNAs: MiRNA and snoRNA
    • Holley CL, Topkara VK. An introduction to small non-coding RNAs: miRNA and snoRNA. Cardiovasc Drugs Ther 2011;25:151.
    • (2011) Cardiovasc Drugs Ther , vol.25 , pp. 151
    • Holley, C.L.1    Topkara, V.K.2
  • 21
    • 84862833549 scopus 로고    scopus 로고
    • Long noncoding RNAs in mammalian cells: What, where, and why?
    • Chen LL, Carmichael GG. Long noncoding RNAs in mammalian cells: What, where, and why? Wiley Inter-discip Rev RNA 2010;1:2.
    • (2010) Wiley Inter-discip Rev RNA , vol.1 , pp. 2
    • Chen, L.L.1    Carmichael, G.G.2
  • 22
    • 67649671961 scopus 로고    scopus 로고
    • Long noncoding RNAs: Functional surprises from the RNA world
    • Wilusz JE, Sunwoo H, Spector DL. Long noncoding RNAs: Functional surprises from the RNA world. Genes Dev 2009;23:1494.
    • (2009) Genes Dev , vol.23 , pp. 1494
    • Wilusz, J.E.1    Sunwoo, H.2    Spector, D.L.3
  • 24
    • 77954290423 scopus 로고    scopus 로고
    • Transcriptional modulation of micro-RNA in human cells differing in radiation sensitivity
    • Chaudhry MA, Kreger B, Omaruddin RA. Transcriptional modulation of micro-RNA in human cells differing in radiation sensitivity. Int J Radiat Biol 2010;86:569.
    • (2010) Int J Radiat Biol , vol.86 , pp. 569
    • Chaudhry, M.A.1    Kreger, B.2    Omaruddin, R.A.3
  • 25
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 2001;25:402.
    • (2001) Methods , vol.25 , pp. 402
    • Livak, K.J.1    Schmittgen, T.D.2
  • 26
    • 84864288293 scopus 로고    scopus 로고
    • Micro RNA responses to chronic or acute exposures to low dose ionizing radiation
    • Chaudhry MA, Omaruddin RA, Kreger B, et al. Micro RNA responses to chronic or acute exposures to low dose ionizing radiation. Mol Biol Rep 2012;39:7549.
    • (2012) Mol Biol Rep , vol.39 , pp. 7549
    • Chaudhry, M.A.1    Omaruddin, R.A.2    Kreger, B.3
  • 27
    • 82255175105 scopus 로고    scopus 로고
    • Biology and applications of small nucleolar RNAs
    • Bratkovic T, Rogelj B. Biology and applications of small nucleolar RNAs. Cell Mol Life Sci 2011;68:3843.
    • (2011) Cell Mol Life Sci , vol.68 , pp. 3843
    • Bratkovic, T.1    Rogelj, B.2
  • 28
    • 84855281316 scopus 로고    scopus 로고
    • Loss of ribo-somal RNA modification causes developmental defects in zebrafish
    • Higa-Nakamine S, Suzuki T, Uechi T, et al. Loss of ribo-somal RNA modification causes developmental defects in zebrafish. Nucleic Acids Res 2012;40:391.
    • (2012) Nucleic Acids Res , vol.40 , pp. 391
    • Higa-Nakamine, S.1    Suzuki, T.2    Uechi, T.3
  • 29
    • 0037721736 scopus 로고    scopus 로고
    • Gene expression profile of human cells irradiated in G1 and G2 phases of cell cycle
    • Chaudhry MA, Chodosh LA, McKenna WG, et al. Gene expression profile of human cells irradiated in G1 and G2 phases of cell cycle. Cancer Lett 2003;195:221.
    • (2003) Cancer Lett , vol.195 , pp. 221
    • Chaudhry, M.A.1    Chodosh, L.A.2    McKenna, W.G.3
  • 30
    • 84861697187 scopus 로고    scopus 로고
    • Small nucleolar RNA 42 acts as an oncogene in lung tumorigenesis
    • Mei YP, Liao JP, Shen J, et al. Small nucleolar RNA 42 acts as an oncogene in lung tumorigenesis. Oncogene 2012;31:2794.
    • (2012) Oncogene , vol.31 , pp. 2794
    • Mei, Y.P.1    Liao, J.P.2    Shen, J.3
  • 31
    • 84865862599 scopus 로고    scopus 로고
    • Specific small nucleolar RNA expression profiles in acute leukemia
    • Valleron W, Laprevotte E, Gautier EF, et al. Specific small nucleolar RNA expression profiles in acute leukemia. Leukemia 2012;26:2052.
    • (2012) Leukemia , vol.26 , pp. 2052
    • Valleron, W.1    Laprevotte, E.2    Gautier, E.F.3
  • 32
    • 84867291885 scopus 로고    scopus 로고
    • Long noncoding RNA: Its physiological and pathological roles
    • Yan B, Wang Z. Long noncoding RNA: Its physiological and pathological roles. DNA Cell Biol 2012;31 Suppl 1:S34.
    • (2012) DNA Cell Biol , vol.31 , Issue.SUPPL. 1
    • Yan, B.1    Wang, Z.2
  • 33
    • 84871284952 scopus 로고    scopus 로고
    • Regulatory long non-coding RNA and its functions
    • Huang Y, Liu N, Wang JP, et al. Regulatory long non-coding RNA and its functions. J Physiol Biochem 2012; 68:611.
    • (2012) J Physiol Biochem , vol.68 , pp. 611
    • Huang, Y.1    Liu, N.2    Wang, J.P.3
  • 34
    • 84866947025 scopus 로고    scopus 로고
    • Emerging roles for long non-coding RNAs in cancer and neurological disorders
    • Niland CN, Merry CR, Khalil AM. Emerging roles for long non-coding RNAs in cancer and neurological disorders. Front Genet 2012;3:25.
    • (2012) Front Genet , vol.3 , pp. 25
    • Niland, C.N.1    Merry, C.R.2    Khalil, A.M.3
  • 35
    • 84863495094 scopus 로고    scopus 로고
    • The hallmarks of cancer: A long non-coding RNA point of view
    • Gutschner T, Diederichs S. The hallmarks of cancer: A long non-coding RNA point of view. RNA Biol 2012;9:703.
    • (2012) RNA Biol , vol.9 , pp. 703
    • Gutschner, T.1    Diederichs, S.2
  • 36
    • 77952952164 scopus 로고    scopus 로고
    • Identification of long stress-induced non-coding transcripts that have altered expression in cancer
    • Silva JM, Perez DS, Pritchett JR, et al. Identification of long stress-induced non-coding transcripts that have altered expression in cancer. Genomics 2010;95:355.
    • (2010) Genomics , vol.95 , pp. 355
    • Silva, J.M.1    Perez, D.S.2    Pritchett, J.R.3
  • 37
    • 84859834708 scopus 로고    scopus 로고
    • Identification and characterization of novel genotoxic stress-inducible nuclear long noncoding RNAs in mammalian cells
    • Mizutani R, Wakamatsu A, Tanaka N, et al. Identification and characterization of novel genotoxic stress-inducible nuclear long noncoding RNAs in mammalian cells. PLoS One 2012;7:e34949.
    • (2012) PLoS One , vol.7
    • Mizutani, R.1    Wakamatsu, A.2    Tanaka, N.3
  • 38
    • 84867569339 scopus 로고    scopus 로고
    • Cigarette smoke exposure-associated alterations to non-coding RNA
    • Maccani MA, Knopik VS. Cigarette smoke exposure-associated alterations to non-coding RNA. Front Genet 2012;3:53.
    • (2012) Front Genet , vol.3 , pp. 53
    • Maccani, M.A.1    Knopik, V.S.2
  • 39
    • 81755161347 scopus 로고    scopus 로고
    • The long noncoding MALAT-1 RNA indicates a poor prognosis in non-small cell lung cancer and induces migration and tumor growth
    • Schmidt LH, Spieker T, Koschmieder S, et al. The long noncoding MALAT-1 RNA indicates a poor prognosis in non-small cell lung cancer and induces migration and tumor growth. J Thorac Oncol 2011;6:1984.
    • (2011) J Thorac Oncol , vol.6 , pp. 1984
    • Schmidt, L.H.1    Spieker, T.2    Koschmieder, S.3
  • 40
    • 84877754579 scopus 로고    scopus 로고
    • Differential expression of long non-coding RNAs during genotoxic stress-induced apoptosis in HeLa and MCF-7 cells
    • Ozgur E, Mert U, Isin M, et al. Differential expression of long non-coding RNAs during genotoxic stress-induced apoptosis in HeLa and MCF-7 cells. Clin Exp Med 2013;13:119.
    • (2013) Clin Exp Med , vol.13 , pp. 119
    • Ozgur, E.1    Mert, U.2    Isin, M.3
  • 41
    • 84864033675 scopus 로고    scopus 로고
    • Malat1 is not an essential component of nuclear speckles in mice
    • Nakagawa S, Ip JY, Shioi G, et al. Malat1 is not an essential component of nuclear speckles in mice. RNA 2012;18:1487.
    • (2012) RNA , vol.18 , pp. 1487
    • Nakagawa, S.1    Ip, J.Y.2    Shioi, G.3
  • 42
    • 84855956560 scopus 로고    scopus 로고
    • Long non-coding RNAs in nuclear bodies
    • Ip JY, Nakagawa S. Long non-coding RNAs in nuclear bodies. Dev Growth Differ 2012;54:44.
    • (2012) Dev Growth Differ , vol.54 , pp. 44
    • Ip, J.Y.1    Nakagawa, S.2
  • 43
    • 67949094334 scopus 로고    scopus 로고
    • Increasing the relative expression of endogenous non-coding steroid receptor RNA activator (SRA) in human breast cancer cells using modified oligonucleotides
    • Cooper C, Guo J, Yan Y, et al. Increasing the relative expression of endogenous non-coding steroid receptor RNA activator (SRA) in human breast cancer cells using modified oligonucleotides. Nucleic Acids Res 2009; 37:4518.
    • (2009) Nucleic Acids Res , vol.37 , pp. 4518
    • Cooper, C.1    Guo, J.2    Yan, Y.3
  • 44
    • 77954853506 scopus 로고    scopus 로고
    • Research resource: Expression profiling reveals unexpected targets and functions of the human steroid receptor RNA activator (SRA) gene
    • Foulds CE, Tsimelzon A, Long W, et al. Research resource: Expression profiling reveals unexpected targets and functions of the human steroid receptor RNA activator (SRA) gene. Mol Endocrinol 2010;24:1090.
    • (2010) Mol Endocrinol , vol.24 , pp. 1090
    • Foulds, C.E.1    Tsimelzon, A.2    Long, W.3
  • 45
    • 70350118664 scopus 로고    scopus 로고
    • Complex architecture and regulated expression of the Sox2ot locus during vertebrate development
    • Amaral PP, Neyt C, Wilkins SJ, et al. Complex architecture and regulated expression of the Sox2ot locus during vertebrate development. RNA 2009;15:2013.
    • (2009) RNA , vol.15 , pp. 2013
    • Amaral, P.P.1    Neyt, C.2    Wilkins, S.J.3
  • 46
    • 67651218200 scopus 로고    scopus 로고
    • Global gene expression analyses of bystander and alpha particle irradiated normal human lung fibroblasts: Synchronous and differential responses
    • Ghandhi SA, Yaghoubian B, Amundson SA. Global gene expression analyses of bystander and alpha particle irradiated normal human lung fibroblasts: Synchronous and differential responses. BMC Med Genomics 2008;1:63.
    • (2008) BMC Med Genomics , vol.1 , pp. 63
    • Ghandhi, S.A.1    Yaghoubian, B.2    Amundson, S.A.3
  • 47
    • 49649115515 scopus 로고    scopus 로고
    • Expression profiles are different in carbon ion-irradiated normal human fibroblasts and their bystander cells
    • Iwakawa M, Hamada N, Imadome K, et al. Expression profiles are different in carbon ion-irradiated normal human fibroblasts and their bystander cells. Mutat Res 2008; 642:57.
    • (2008) Mutat Res , vol.642 , pp. 57
    • Iwakawa, M.1    Hamada, N.2    Imadome, K.3
  • 48
    • 77950578977 scopus 로고    scopus 로고
    • Bystander effects induced by medium from irradiated cells: Similar tran-scriptome responses in irradiated and bystander K562 cells
    • Herok R, Konopacka M, Polanska J, et al. Bystander effects induced by medium from irradiated cells: Similar tran-scriptome responses in irradiated and bystander K562 cells. Int J Radiat Oncol Biol Phys 2010;77:244.
    • (2010) Int J Radiat Oncol Biol Phys , vol.77 , pp. 244
    • Herok, R.1    Konopacka, M.2    Polanska, J.3
  • 49
    • 67349275316 scopus 로고    scopus 로고
    • X-irradiation and bystander effects induce similar changes of transcript profiles in most functional pathways in human melanoma cells
    • Rzeszowska-Wolny J, Herok R, Widel M, et al. X-irradiation and bystander effects induce similar changes of transcript profiles in most functional pathways in human melanoma cells. DNA Repair (Amst) 2009;8:732.
    • (2009) DNA Repair (Amst) , vol.8 , pp. 732
    • Rzeszowska-Wolny, J.1    Herok, R.2    Widel, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.