Disulfide bonds regulate binding of exogenous ligand to human cytoglobin

Journal of Inorganic Biochemistry

Volumn 135, Issue , 2014, Pages 20-27

  Tsujino, Hirofumi ^a   Yamashita, Taku ^a   Nose, Azusa ^a   Kukino, Kaori ^a   Sawai, Hitomi ^b   Shiro, Yoshitsugu ^c   Uno, Tadayuki ^a  

^a OSAKA UNIVERSITY   (Japan)

^b UNIVERSITY OF HYOGO   (Japan)

^c RIKEN SPring 8 Center ^*  (Japan)

Author keywords

Binding affinity; Cytoglobin; Disulfide bond; Resonance Raman spectroscopy

Indexed keywords

CARBON MONOXIDE; CYANIDE; CYSTEINE; CYTOGLOBIN; DISULFIDE; IRON; LIGAND; MONOMER; TETRAMER; THIOL GROUP; CYSTINE; GLOBIN; HEME; POTASSIUM CYANIDE; PROTEIN BINDING;

ARTICLE; BINDING AFFINITY; CHEMICAL STRUCTURE; DISULFIDE BOND; GEL CHROMATOGRAPHY; GEL PERMEATION CHROMATOGRAPHY; HUMAN; LIGAND BINDING; PHYSIOLOGICAL PROCESS; POLYACRYLAMIDE GEL ELECTROPHORESIS; POLYMERIZATION; PROTEIN BINDING; SEPARATION TECHNIQUE; WILD TYPE; AMINO ACID SUBSTITUTION; CHEMISTRY; GENETICS; KINETICS; OXIDATION REDUCTION REACTION; PROTEIN MULTIMERIZATION; RAMAN SPECTROMETRY; SITE DIRECTED MUTAGENESIS;

AMINO ACID SUBSTITUTION; CARBON MONOXIDE; CYSTINE; GLOBINS; HEME; HUMANS; KINETICS; LIGANDS; MUTAGENESIS, SITE-DIRECTED; OXIDATION-REDUCTION; POTASSIUM CYANIDE; PROTEIN BINDING; PROTEIN MULTIMERIZATION; SPECTRUM ANALYSIS, RAMAN;

EID: 84896506113     PISSN: 01620134     EISSN: 18733344     Source Type: Journal    
DOI: 10.1016/j.jinorgbio.2014.02.011     Document Type: Article

References (58)

1. N. Kawada, D.B. Kristensen, K. Asahina, K. Nakatani, Y. Minamiyama, S. Seki, and K. Yoshizato J. Biol. Chem. 276 2001 25318 25323
2. J.T. Trent III, and M.S. Hargrove J. Biol. Chem. 277 2002 19538 19545
3. M. Makino, H. Sawai, Y. Shiro, and H. Sugimoto Proteins 79 2011 1143 1153
4. R. Liddington, Z. Derewenda, G. Dodson, and D. Harris Nature 331 1988 725 728
5. D. de Sanctis, S. Dewilde, A. Pesce, L. Moens, P. Ascenzi, T. Hankeln, T. Burmester, and M. Bolognesi J. Mol. Biol. 336 2004 917 927
6. T. Uno, R. Sakamoto, Y. Tomisugi, Y. Ishikawa, and A.J. Wilkinson Biochemistry 42 2003 10191 10199
7. A. Pesce, S. Dewilde, M. Nardini, L. Moens, P. Ascenzi, T. Hankeln, T. Burmester, and M. Bolognesi Structure 11 2003 1087 1095
8. B. Vallone, K. Nienhaus, A. Matthes, M. Brunori, and G.U. Nienhaus Proc. Natl. Acad. Sci. U. S. A. 101 2004 17351 17356
9. H. Sugimoto, M. Makino, H. Sawai, N. Kawada, K. Yoshizato, and Y. Shiro J. Mol. Biol. 339 2004 873 885
10. T. Uno, D. Ryu, H. Tsutsumi, Y. Tomisugi, Y. Ishikawa, A.J. Wilkinson, H. Sato, and T. Hayashi J. Biol. Chem. 279 2004 5886 5893
11. H. Sawai, N. Kawada, K. Yoshizato, H. Nakajima, S. Aono, and Y. Shiro Biochemistry 42 2003 5133 5142
12. H. Sawai, M. Makino, Y. Mizutani, T. Ohta, H. Sugimoto, T. Uno, N. Kawada, K. Yoshizato, T. Kitagawa, and Y. Shiro Biochemistry 44 2005 13257 13265
13. C. Lechauve, C. Chauvierre, S. Dewilde, L. Moens, B.N. Green, M.C. Marden, C. Celier, and L. Kiger FEBS J. 277 2010 2696 2704
14. A.M. Gardner, M.R. Cook, and P.R. Gardner J. Biol. Chem. 285 2010 23850 23857
15. S. Kakar, F.G. Hoffman, J.F. Storz, M. Fabian, and M.S. Hargrove Biophys. Chem. 152 2010 1 14
16. A. Avivi, F. Gerlach, A. Joel, S. Reuss, T. Burmester, E. Nevo, and T. Hankeln Proc. Natl. Acad. Sci. U. S. A. 107 2010 21570 21575
17. L. Beltran-Parrazal, D. Acuna, A.M. Ngan, E. Kim, A. Ngan, K. Kawakami, J. Edmond, and I.A. Lopez Brain Res. 1330 2010 61 71
18. S. Schubert, F. Gerlach, G. Stoltenburg-Didinger, T. Burmester, T. Hankeln, W. Boettcher, A. Wehsack, M. Hubler, F. Berger, and H. Abdul-Khaliq Brain Res. 1356 2010 1 10
19. I. Mimura, M. Nangaku, H. Nishi, R. Inagi, T. Tanaka, and T. Fujita Am. J. Physiol. Renal Physiol. 299 2010 F1120 F1133
20. N. Shivapurkar, V. Stastny, N. Okumura, L. Girard, Y. Xie, C. Prinsen, F.B. Thunnissen, B. Wistuba II, E. Frenkel Czerniak, J.A. Roth, T. Liloglou, G. Xinarianos, J.K. Field, J.D. Minna, and A.F. Gazdar Cancer Res. 68 2008 7448 7456
21. R.J. Shaw, M.M. Omar, S. Rokadiya, F.A. Kogera, D. Lowe, G.L. Hall, J.A. Woolgar, J. Homer, T. Liloglou, J.K. Field, and J.M. Risk Br. J. Cancer 101 2009 139 144
22. T.T. Thuy le, T. Morita, K. Yoshida, K. Wakasa, M. Iizuka, T. Ogawa, M. Mori, Y. Sekiya, S. Momen, H. Motoyama, K. Ikeda, K. Yoshizato, and N. Kawada Am. J. Pathol. 179 2011 1050 1060
23. M.G. Petersen, S. Dewilde, and A. Fago J. Inorg. Biochem. 102 2008 1777 1782
24. H. Ishikawa, S. Kim, K. Kwak, K. Wakasugi, and M.D. Fayer Proc. Natl. Acad. Sci. U. S. A. 104 2007 19309 19314
25. L. Astudillo, S. Bernad, V. Derrien, P. Sebban, and J. Miksovska Biophys. J. 99 2010 L16 L18
26. L. Kiger, L. Tilleman, E. Geuens, D. Hoogewijs, C. Lechauve, L. Moens, S. Dewilde, and M.C. Marden PLoS One 6 2011 e20478
27. B.J. Reeder, D.A. Svistunenko, and M.T. Wilson Biochem. J. 434 2011 483 492
28. T. Yamashita, Y. Hoashi, K. Watanabe, Y. Tomisugi, Y. Ishikawa, and T. Uno J. Biol. Chem. 279 2004 21394 21400
29. M. Brunori, A. Giuffre, K. Nienhaus, G.U. Nienhaus, F.M. Scandurra, and B. Vallone Proc. Natl. Acad. Sci. U. S. A. 102 2005 8483 8488
30. V. Le Guilloux, P. Schmidtke, and P. Tuffery BMC Bioinforma. 10 2009 168
31. L. Wang, T.L. Cvetkov, M.R. Chance, and V.Y. Moiseenkova-Bell J. Biol. Chem. 287 2012 6169 6176
32. H. Aoyama, K. Muramoto, K. Shinzawa-Itoh, K. Hirata, E. Yamashita, T. Tsukihara, T. Ogura, and S. Yoshikawa Proc. Natl. Acad. Sci. U. S. A. 106 2009 2165 2169
33. T. Uno, Y. Nishimura, M. Tsuboi, K. Kita, and Y. Anraku J. Biol. Chem. 260 1985 6755 6760
34. T.G. Spiro Adv. Protein Chem. 37 1985 111 159
35. J. al-Mustafa, and J.R. Kincaid Biochemistry 33 1994 2191 2197
36. R. Varhac, and M. Antalik J. Biol. Inorg. Chem. 13 2008 713 721
37. N. Gupta, and S.W. Ragsdale J. Biol. Chem. 286 2011 4392 4403
38. L. Yi, J.T. Morgan, and S.W. Ragsdale J. Biol. Chem. 285 2010 20117 20127
39. H. Kurokawa, D.S. Lee, M. Watanabe, I. Sagami, B. Mikami, C.S. Raman, and T. Shimizu J. Biol. Chem. 279 2004 20186 20193
40. H.Y. Cho, H.J. Cho, Y.M. Kim, J.I. Oh, and B.S. Kang J. Biol. Chem. 284 2009 13057 13067
41. M.H. Vos, L. Bouzhir-Sima, J.C. Lambry, H. Luo, J.J. Eaton-Rye, A. Ioanoviciu, P.R. Ortiz de Montellano, and U. Liebl Biochemistry 51 2012 159 166
42. H. Nishi, R. Inagi, N. Kawada, K. Yoshizato, I. Mimura, T. Fujita, and M. Nangaku Am. J. Pathol. 178 2011 128 139
43. F.E. McRonald, J.M. Risk, and N.J. Hodges PLoS One 7 2012 e30587
44. A.P. Mogal, M.A. Watson, F. Ozsolak, L. Salavaggione, and P.A. Humphrey Prostate 72 2012 931 937
45. C. Tanaka, D.E. Coling, S. Manohar, G.D. Chen, B.H. Hu, R. Salvi, and D. Henderson Neurobiol. Aging 33 2012 1842.e1 1842.e14
46. X. Liu, D. Follmer, J.R. Zweier, X. Huang, C. Hemann, K. Liu, L.J. Druhan, and J.L. Zweier Biochemistry 51 2012 5072 5082
47. J.I. Stagner, R.S. Seelan, and R.N. Parthasarathy Islets 3 2011 89 92
48. J. Fang, I. Ma, and J. Allalunis-Turner Radiat. Res. 176 2011 198 207
49. Y. Sun, K. Jin, A. Peel, X.O. Mao, L. Xie, and D.A. Greenberg Proc. Natl. Acad. Sci. U. S. A. 100 2003 3497 3500
50. A. Fago, C. Hundahl, S. Dewilde, K. Gilany, L. Moens, and R.E. Weber J. Biol. Chem. 279 2004 44417 44426
51. D. Hamdane, L. Kiger, S. Dewilde, B.N. Green, A. Pesce, J. Uzan, T. Burmester, T. Hankeln, M. Bolognesi, L. Moens, and M.C. Marden J. Biol. Chem. 278 2003 51713 51721
52. D. Hamdane, L. Kiger, S. Dewilde, J. Uzan, T. Burmester, T. Hankeln, L. Moens, and M.C. Marden FEBS J. 272 2005 2076 2084
53. F. Trandafir, D. Hoogewijs, F. Altieri, P. Rivetti di Val Cervo, K. Ramser, S. Van Doorslaer, J.R. Vanfleteren, L. Moens, and S. Dewilde Gene 398 2007 103 113
54. G.E. Borgstahl, H.E. Parge, M.J. Hickey, W.F. Beyer Jr., R.A. Hallewell, and J.A. Tainer Cell 71 1992 107 118
55. H.P. Lee, N. Pancholi, L. Esposito, L.A. Previll, X. Wang, X. Zhu, M.A. Smith, and H.G. Lee PLoS One 7 2012 e28033
56. P.R. Gardner J. Inorg. Biochem. 99 2005 247 266
57. M. Gabba, S. Abbruzzetti, F. Spyrakis, F. Forti, S. Bruno, A. Mozzarelli, F.J. Luque, C. Viappiani, P. Cozzini, M. Nardini, F. Germani, M. Bolognesi, L. Moens, and S. Dewilde PLoS One 8 2013 e49770
58. E.F. Pettersen, T.D. Goddard, C.C. Huang, G.S. Couch, D.M. Greenblatt, E.C. Meng, and T.E. Ferrin J. Comput. Chem. 25 2004 1605 1612