Extending shikimate pathway for the production of muconic acid and its precursor salicylic acid in Escherichia coli

Metabolic Engineering

Volumn 23, Issue , 2014, Pages 62-69

  Lin, Yuheng ^a   Sun, Xinxiao ^b   Yuan, Qipeng ^b   Yan, Yajun ^a  

^a University of Georgia   (United States)

^b BEIJING UNIVERSITY OF CHEMICAL TECHNOLOGY   (China)

Author keywords

Escherichia coli; Metabolic engineering; Microbial production; Muconic acid; Salicylic acid

Indexed keywords

AMINO ACIDS; BIOCHEMISTRY; BIOSYNTHESIS; ESCHERICHIA COLI; INDICATORS (CHEMICAL); METABOLIC ENGINEERING; METABOLITES; ORGANIC CHEMICALS; PLASTICS INDUSTRY;

BIOSYNTHETIC PATHWAY; CATECHOL 1 , 2-DIOXYGENASE; DEGRADATION METABOLITES; DEGRADATION PATHWAYS; ISOCHORISMATE SYNTHASE; MICROBIAL PRODUCTION; MODULAR OPTIMIZATIONS; MUCONIC ACID;

SALICYLIC ACID;

CARBON; CATECHOL; CATECHOL 1,2 DIOXYGENASE; ISOCHORISMATE PYRUVATE LYASE; ISOCHORISMATE SYNTHASE; MUCONIC ACID; PHENYLALANINE; SALICYLIC ACID; SHIKIMIC ACID; SYNTHETASE; UNCLASSIFIED DRUG; UNSPECIFIC MONOOXYGENASE; ESCHERICHIA COLI PROTEIN; LYASE; MUTASE; SORBIC ACID;

ARTICLE; BIODEGRADATION; BIOSYNTHESIS; CARBON SOURCE; CELL PROLIFERATION; ENZYME ACTIVITY; ESCHERICHIA COLI; METABOLIC ENGINEERING; NONHUMAN; PRECURSOR; PRIORITY JOURNAL; ANALOGS AND DERIVATIVES; GENETICS; METABOLISM; PROCEDURES;

CARBON-OXYGEN LYASES; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; INTRAMOLECULAR TRANSFERASES; METABOLIC ENGINEERING; SALICYLIC ACID; SHIKIMIC ACID; SORBIC ACID;

EID: 84896139366     PISSN: 10967176     EISSN: 10967184     Source Type: Journal    
DOI: 10.1016/j.ymben.2014.02.009     Document Type: Article

References (34)

1. Ajikumar P.K., Xiao W.H., Tyo K.E., Wang Y., Simeon F., Leonard E., Mucha O., Phon T.H., Pfeifer B., Stephanopoulos G. Isoprenoid pathway optimization for Taxol precursor overproduction in Escherichia coli. Science 2010, 330:70-74.
2. Anthony J.R., Anthony L.C., Nowroozi F., Kwon G., Newman J.D., Keasling J.D. Optimization of the mevalonate-based isoprenoid biosynthetic pathway in Escherichia coli for production of the anti-malarial drug precursor amorpha-4,11-diene. Metab. Eng. 2009, 11:13-19.
3. Atsumi S., Cann A.F., Connor M.R., Shen C.R., Smith K.M., Brynildsen M.P., Chou K.J., Hanai T., Liao J.C. Metabolic engineering of Escherichia coli for 1-butanol production. Metab. Eng. 2008, 10:305-311.
4. Chen Z., Zheng Z., Huang J., Lai Z., Fan B. Biosynthesis of salicylic acid in plants. Plant Signal. Behav. 2009, 4:493-496.
5. Curran K.A., Leavitt J.M., Karim A.S., Alper H.S. Metabolic engineering of muconic acid production in Saccharomyces cerevisiae. Metab. Eng. 2013, 15:55-66.
6. Dahl R.H., Zhang F., Alonso-Gutierrez J., Baidoo E., Batth T.S., Redding-Johanson A.M., Petzold C.J., Mukhopadhyay A., Lee T.S., Adams P.D., Keasling J.D. Engineering dynamic pathway regulation using stress-response promoters. Nat. Biotechnol. 2013, 31:1039-1046.
7. Draths K.M., Frost J.W. Environmentally compatible synthesis of adipic acid from d-glucose. J. Am. Chem. Soc. 1994, 116:399-400.
8. Fisher M.A., Boyarskiy S., Yamada M.R., Kong N., Bauer S., Tullman-Ercek D. Enhancing tolerance to short-chain alcohols by engineering the Escherichia coli AcrB efflux pump to secrete the non-native substrate n-butanol. ACS Synth. Biol. 2014, 3:30-40.
9. Fuchs G., Boll M., Heider J. Microbial degradation of aromatic compounds-from one strategy to four. Nat. Rev. Microbiol. 2011, 9:803-816.
10. Gaille C., Kast P., Haas D. Salicylate biosynthesis in Pseudomonas aeruginosa. Purification and characterization of PchB, a novel bifunctional enzyme displaying isochorismate pyruvate-lyase and chorismate mutase activities. J. Biol. Chem. 2002, 277:21768-21775.
11. Gaille C., Reimmann C., Haas D. Isochorismate synthase (PchA), the first and rate-limiting enzyme in salicylate biosynthesis of Pseudomonas aeruginosa. J. Biol. Chem. 2003, 278:16893-16898.
12. Hammer K., Mijakovic I., Jensen P.R. Synthetic promoter libraries-tuning of gene expression. Trends Biotechnol. 2006, 24:53-55.
13. Huang Q., Lin Y., Yan Y. Caffeic acid production enhancement by engineering a phenylalanine over-producing Escherichia coli. Biotechnol. Bioeng. 2013, 110:3188-3196.
14. Juminaga D., Baidoo E.E., Redding-Johanson A.M., Batth T.S., Burd H., Mukhopadhyay A., Petzold C.J., Keasling J.D. Modular engineering of l-tyrosine production in Escherichia coli. Appl. Environ. Microbiol. 2012, 78:89-98.
15. Lin Y., Shen X., Yuan Q., Yan Y. Microbial biosynthesis of the anticoagulant precursor 4-hydroxycoumarin. Nat. Commun. 2013, 4:2603.
16. Lin Y., Sun X., Yuan Q., Yan Y. Combinatorial biosynthesis of plant-specific coumarins in bacteria. Metab. Eng. 2013, 18:69-77.
17. Lin Y., Yan Y. Biosynthesis of caffeic acid in Escherichia coli using its endogenous hydroxylase complex. Microb. Cell Factories 2012, 11:42.
18. Niu W., Draths K.M., Frost J.W. Benzene-free synthesis of adipic acid. Biotechnol. Prog. 2002, 18:201-211.
19. Oliver J.W., Machado I.M., Yoneda H., Atsumi S. Cyanobacterial conversion of carbon dioxide to 2,3-butanediol. Proc. Natl. Acad. Sci. USA 2013, 110:1249-1254.
20. Patnaik R., Zolandz R.R., Green D.A., Kraynie D.F. l-tyrosine production by recombinant Escherichia coli: fermentation optimization and recovery. Biotechnol. Bioeng. 2008, 99:741-752.
21. Rabinovitch-Deere C.A., Oliver J.W., Rodriguez G.M., Atsumi S. Synthetic biology and metabolic engineering approaches to produce biofuels. Chem. Rev. 2013, 113:4611-4632.
22. Salis H.M., Mirsky E.A., Voigt C.A. Automated design of synthetic ribosome binding sites to control protein expression. Nat. Biotechnol. 2009, 27:946-950.
23. Seo J.S., Keum Y.S., Li Q.X. Bacterial degradation of aromatic compounds. Int. J. Environ. Res. Public Health 2009, 6:278-309.
24. Shen C.R., Liao J.C. Metabolic engineering of Escherichia coli for 1-butanol and 1-propanol production via the keto-acid pathways. Metab. Eng. 2008, 10:312-320.
25. Shen X., Lin Y., Jain R., Yuan Q., Yan Y. Inhibition of acetate accumulation leads to enhanced production of (R,R)-2,3-butanediol from glycerol in Escherichia coli. J. Ind. Microbiol. Biotechnol. 2012, 39:1725-1729.
26. Smolke C.D., Martin V.J., Keasling J.D. Controlling the metabolic flux through the carotenoid pathway using directed mRNA processing and stabilization. Metab. Eng. 2001, 3:313-321.
27. Sun X., Lin Y., Huang Q., Yuan Q., Yan Y. A novel muconic acid biosynthesis approach by shunting tryptophan biosynthesis via anthranilate. Appl. Environ. Microbiol. 2013, 79:4024-4030.
28. Transparency Market Research, 2013. Salicylic Acid Market for Pharmaceutical, Skin care, Hair care and Other Applications-Global Industry Analysis, Size, Share, Growth, Trends, and Forecast 2013-2019.
29. Weber C., Bruckner C., Weinreb S., Lehr C., Essl C., Boles E. Biosynthesis of cis,cis-muconic acid and its aromatic precursors, catechol and protocatechuic acid, from renewable feedstocks by Saccharomyces cerevisiae. Appl. Environ. Microbiol. 2012, 78:8421-8430.
30. Xu P., Bhan N., Koffas M.A.G. Engineering plant metabolism into microbes: from systems biology to synthetic biology. Curr. Opin. Biotechnol. 2013, 24:291-299.
31. Xu P., Gu Q., Wang W., Wong L., Bower A.G., Collins C.H., Koffas M.A. Modular optimization of multi-gene pathways for fatty acids production in E. coli. Nat. Commun. 2013, 4:1409.
32. Zhang F., Carothers J.M., Keasling J.D. Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids. Nat. Biotechnol. 2012, 30:354-359.
33. Zhang K., Sawaya M.R., Eisenberg D.S., Liao J.C. Expanding metabolism for biosynthesis of nonnatural alcohols. Proc. Natl. Acad. Sci. USA 2008, 105:20653-20658.
34. Zhang K., Woodruff A.P., Xiong M., Zhou J., Dhande Y.K. A synthetic metabolic pathway for production of the platform chemical isobutyric acid. ChemSusChem 2011, 4:1068-1070.