메뉴 건너뛰기




Volumn 19, Issue 2, 2014, Pages 140-144

Text mining for systems biology

Author keywords

[No Author keywords available]

Indexed keywords

AUTOMATION; BIOMEDICINE; COMPUTER MODEL; DATA MINING; EXTRACTION; HUMAN; KNOWLEDGE BASE; MEDICAL INFORMATICS; MEDICAL ONTOLOGY; QUALITY CONTROL; REVIEW; SYSTEMS BIOLOGY; TEXT MINING; INTERDISCIPLINARY COMMUNICATION; INTERPERSONAL COMMUNICATION; PROCEDURES; THEORETICAL MODEL;

EID: 84895930934     PISSN: 13596446     EISSN: 18785832     Source Type: Journal    
DOI: 10.1016/j.drudis.2013.09.012     Document Type: Review
Times cited : (28)

References (25)
  • 1
    • 84869505278 scopus 로고    scopus 로고
    • Text-mining solutions for biomedical research: Enabling integrative biology
    • D. Rebholz-Schuhmann et al. Text-mining solutions for biomedical research: enabling integrative biology Nat. Rev. Genet. 13 2012 829 839
    • (2012) Nat. Rev. Genet. , vol.13 , pp. 829-839
    • Rebholz-Schuhmann, D.1
  • 2
    • 67649259165 scopus 로고    scopus 로고
    • Computational disease modeling: Fact or fiction?
    • J.N. Tegnér et al. Computational disease modeling: fact or fiction? BMC Syst. Biol. 4 2009 56
    • (2009) BMC Syst. Biol. , vol.4 , pp. 56
    • Tegnér, J.N.1
  • 3
    • 84855968999 scopus 로고    scopus 로고
    • Predictive mathematical models of cancer signalling pathways
    • J. Bachmann et al. Predictive mathematical models of cancer signalling pathways J. Intern. Med. 271 2012 155 165
    • (2012) J. Intern. Med. , vol.271 , pp. 155-165
    • Bachmann, J.1
  • 4
    • 76349097583 scopus 로고    scopus 로고
    • Inference of gene regulatory networks using Boolean-network inference methods
    • G.J. Hickman, and T.C. Hodgman Inference of gene regulatory networks using Boolean-network inference methods J. Bioinform. Comput. Biol. 7 2009 1013 1029
    • (2009) J. Bioinform. Comput. Biol. , vol.7 , pp. 1013-1029
    • Hickman, G.J.1    Hodgman, T.C.2
  • 5
    • 84870066616 scopus 로고    scopus 로고
    • A systematic approach to multifactorial cardiovascular disease: Causal analysis
    • S.M. Schwartz et al. A systematic approach to multifactorial cardiovascular disease: causal analysis Arterioscler. Thromb. Vasc. Biol. 32 2012 2821 2835
    • (2012) Arterioscler. Thromb. Vasc. Biol. , vol.32 , pp. 2821-2835
    • Schwartz, S.M.1
  • 6
    • 77953917404 scopus 로고    scopus 로고
    • Event extraction for systems biology by text mining the literature
    • S. Ananiadou et al. Event extraction for systems biology by text mining the literature Trends Biotechnol. 28 2010 381 390
    • (2010) Trends Biotechnol. , vol.28 , pp. 381-390
    • Ananiadou, S.1
  • 7
    • 84895926616 scopus 로고    scopus 로고
    • Speaking of systems biology: Knowledge representation languages for pathway maps and computable biological networks
    • http://dx.doi.org/DRUDIS-D-13-00062
    • T. Slater et al. Speaking of systems biology: knowledge representation languages for pathway maps and computable biological networks Drug Discov. Today 2013 http://dx.doi.org/DRUDIS-D-13-00062
    • (2013) Drug Discov. Today
    • Slater, T.1
  • 8
    • 77956664073 scopus 로고    scopus 로고
    • The BioPAX community standard for pathway data sharing
    • E. Demir et al. The BioPAX community standard for pathway data sharing Nat. Biotechnol. 28 2010 935 942
    • (2010) Nat. Biotechnol. , vol.28 , pp. 935-942
    • Demir, E.1
  • 9
    • 80052329143 scopus 로고    scopus 로고
    • Using electronic patient records to discover disease correlations and stratify patient cohorts
    • F.S. Roque et al. Using electronic patient records to discover disease correlations and stratify patient cohorts PLoS Comput. Biol. 7 2011 e1002141
    • (2011) PLoS Comput. Biol. , vol.7 , pp. 1002141
    • Roque, F.S.1
  • 10
    • 84897564754 scopus 로고    scopus 로고
    • ADO: A disease ontology representing the domain knowledge specific to Alzheimer's disease
    • 10.1016/j.jalz.2013.02.009
    • A. Malhotra et al. ADO: a disease ontology representing the domain knowledge specific to Alzheimer's disease Alzheimers Dementia 2013, July 3 10.1016/j.jalz.2013.02.009
    • (2013) Alzheimers Dementia
    • Malhotra, A.1
  • 11
    • 84871153059 scopus 로고    scopus 로고
    • Mining biomarker information in biomedical literature
    • E. Younesi et al. Mining biomarker information in biomedical literature BMC Med. Inform. Decision Making 12 2012 148
    • (2012) BMC Med. Inform. Decision Making , vol.12 , pp. 148
    • Younesi, E.1
  • 12
    • 84868250727 scopus 로고    scopus 로고
    • Alzheimer's disease biomarker discovery using in silico literature mining and clinical validation
    • I. Greco et al. Alzheimer's disease biomarker discovery using in silico literature mining and clinical validation J. Transl. Med. 10 2012 217
    • (2012) J. Transl. Med. , vol.10 , pp. 217
    • Greco, I.1
  • 13
    • 84880797145 scopus 로고    scopus 로고
    • 'HypothesisFinder': A strategy for the detection of speculative statements in scientific text
    • A. Malhotra et al. 'HypothesisFinder': a strategy for the detection of speculative statements in scientific text PLoS Comp. Biol. 9 2013 e1003117
    • (2013) PLoS Comp. Biol. , vol.9 , pp. 1003117
    • Malhotra, A.1
  • 14
    • 51049088874 scopus 로고    scopus 로고
    • Overview of BioCreative II gene mention recognition
    • L. Smith et al. Overview of BioCreative II gene mention recognition Genome Biol. 9 Suppl. 2 2008 S2
    • (2008) Genome Biol. , vol.9 , Issue.SUPPL. 2 , pp. 2
    • Smith, L.1
  • 15
    • 41349103793 scopus 로고    scopus 로고
    • Overview of BioCreative II gene normalization
    • A.A. Morgan et al. Overview of BioCreative II gene normalization Genome Biol. 9 Suppl. 2 2008 S3
    • (2008) Genome Biol. , vol.9 , Issue.SUPPL. 2 , pp. 3
    • Morgan, A.A.1
  • 16
    • 84862261069 scopus 로고    scopus 로고
    • Text mining for the biocuration workflow
    • Hirschman, L. et al. (2012) Text mining for the biocuration workflow. Database http://dx.doi.org/10.1093/database/bas020
    • (2012) Database
    • Hirschman, L.1
  • 17
    • 84863506694 scopus 로고    scopus 로고
    • ChemSpot: A hybrid system for chemical named entity recognition
    • T. Rocktäschel et al. ChemSpot: a hybrid system for chemical named entity recognition Bioinformatics 28 2012 1633 1640
    • (2012) Bioinformatics , vol.28 , pp. 1633-1640
    • Rocktäschel, T.1
  • 18
    • 84876522835 scopus 로고    scopus 로고
    • BRENDA in 2013: Integrated reactions, kinetic data, enzyme function data, improved disease classification: New options and contents in BRENDA
    • I. Schomburg et al. BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA Nucleic Acids Res. 41 2013 D764 D772
    • (2013) Nucleic Acids Res. , vol.41
    • Schomburg, I.1
  • 19
    • 84873033718 scopus 로고    scopus 로고
    • An integrated pharmacokinetics ontology and corpus for text mining
    • H.Y. Wu et al. An integrated pharmacokinetics ontology and corpus for text mining BMC Bioinform. 14 2013 35
    • (2013) BMC Bioinform. , vol.14 , pp. 35
    • Wu, H.Y.1
  • 20
    • 77958517074 scopus 로고    scopus 로고
    • Improving the inter-corpora compatibility for protein annotations
    • Y. Wang et al. Improving the inter-corpora compatibility for protein annotations J. Bioinform. Comp. Biol. 8 2010 901 916
    • (2010) J. Bioinform. Comp. Biol. , vol.8 , pp. 901-916
    • Wang, Y.1
  • 21
    • 84895927770 scopus 로고    scopus 로고
    • Selected articles from the BioNLP Shared Task 2011
    • J.D. Kim et al. Selected articles from the BioNLP Shared Task 2011 BMC Bioinform. 13 2012 S11
    • (2012) BMC Bioinform. , vol.13 , pp. 11
    • Kim, J.D.1
  • 22
    • 77957140630 scopus 로고    scopus 로고
    • The structural and content aspects of abstracts versus bodies of full text journal articles are different
    • K.B. Cohen et al. The structural and content aspects of abstracts versus bodies of full text journal articles are different BMC Bioinform. 11 2010 492
    • (2010) BMC Bioinform. , vol.11 , pp. 492
    • Cohen, K.B.1
  • 23
    • 84879838142 scopus 로고    scopus 로고
    • IMole, a web based image retrieval system from biomedical literature
    • M. Giordano et al. iMole, a web based image retrieval system from biomedical literature Electrophoresis 34 2013 1965 1968
    • (2013) Electrophoresis , vol.34 , pp. 1965-1968
    • Giordano, M.1
  • 24
    • 82355186295 scopus 로고    scopus 로고
    • A table detection method for multipage PDF documents via visual separators and tabular structures
    • IEEE Computer Society
    • J. Fang et al. A table detection method for multipage PDF documents via visual separators and tabular structures Proceedings of the 2011 International Conference on Document Analysis and Recognition IEEE Computer Society 2011 779 783
    • (2011) Proceedings of the 2011 International Conference on Document Analysis and Recognition , pp. 779-783
    • Fang, J.1
  • 25
    • 85016077998 scopus 로고    scopus 로고
    • BEL networks derived from qualitative translations of BioNLP shared task annotations
    • Association for Computational Linguistics
    • J. Fluck et al. BEL networks derived from qualitative translations of BioNLP shared task annotations Proceedings of the 2013 Workshop on Biomedical Natural Language Processing Association for Computational Linguistics 2013 80 88
    • (2013) Proceedings of the 2013 Workshop on Biomedical Natural Language Processing , pp. 80-88
    • Fluck, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.