A Novel Bayesian Method for Detection of APOBEC3-Mediated Hypermutation and Its Application to Zoonotic Transmission of Simian Foamy Viruses

PLoS Computational Biology

Volumn 10, Issue 2, 2014, Pages

  Matsen IV, Frederick A ^a   Small, Christopher T ^a   Soliven, Khanh ^a   Engel, Gregory A ^b,c   Feeroz, Mostafa M ^d   Wang, Xiaoxing ^a   Craig, Karen L ^a   Hasan, M Kamrul ^d   Emerman, Michael ^a   Linial, Maxine L ^a   Jones Engel, Lisa ^b  

^a USA   (United States)

^b UNIVERSITY OF WASHINGTON   (United States)

^c SWEDISH MEDICAL CENTER   (United States)

^d JAHANGIRNAGAR UNIVERSITY   (Bangladesh)

Author keywords

[No Author keywords available]

Indexed keywords

MAMMALS; VIRUSES;

BANGLADESH; BAYESIAN APPROACHES; BAYESIAN METHODS; CLOSE PROXIMITY; HUMAN-TO-HUMAN TRANSMISSION; HYPER MUTATION; ITS APPLICATIONS; NON-HUMAN PRIMATE; SIMIAN FOAMY VIRUS; VIRUS SEQUENCES;

BAYESIAN NETWORKS;

APOLIPOPROTEIN B MESSENGER RNA EDITING ENZYME CATALYTIC POLYPEPTIDE 3G; APOBEC3 PROTEIN, HUMAN; APOBEC3G PROTEIN, HUMAN; CYTIDINE DEAMINASE; CYTOSINE DEAMINASE; STOP CODON; VIRUS RNA;

ARTICLE; BANGLADESH; BAYES THEOREM; DNA SEQUENCE; GENE MUTATION; GENETIC VARIABILITY; HOST RESISTANCE; HUMAN; NONHUMAN; PRIMATE; SIMIAN FOAMY VIRUS; SPECIES COMPARISON; SPECIES DIFFERENCE; STOP CODON; VIRUS GENOME; VIRUS MUTATION; VIRUS REPLICATION; VIRUS TRANSMISSION; ZOONOSIS; ANIMAL; BIOLOGICAL MODEL; BIOLOGY; GENETICS; HOST PATHOGEN INTERACTION; MACACA; MUTATION; PATHOGENICITY; PHYSIOLOGY; RETROVIRUS INFECTION; TRANSMISSION; VIROLOGY;

ANIMALS; BANGLADESH; BAYES THEOREM; CODON, TERMINATOR; COMPUTATIONAL BIOLOGY; CYTIDINE DEAMINASE; CYTOSINE DEAMINASE; HOST-PATHOGEN INTERACTIONS; HUMANS; MACACA; MODELS, GENETIC; MUTATION; RETROVIRIDAE INFECTIONS; RNA, VIRAL; SIMIAN FOAMY VIRUS; SPECIES SPECIFICITY; VIRUS REPLICATION; ZOONOSES;

EID: 84895734576     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1003493     Document Type: Article

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