An Integrated Framework for High Angular Resolution Diffusion Imaging–Based Investigation of Structural Connectivity

Brain Connectivity

Volumn 2, Issue 2, 2012, Pages 69-79

  Bloy, Luke ^a   Ingalhalikar, Madhura ^a   Batmanghelich, Nematollah K ^a   Schultz, Robert T ^b   Roberts, Timothy P l ^b   Verma, Ragini ^a  

^a UNIVERSITY OF PENNSYLVANIA   (United States)

^b CHILDREN S HOSPITAL OF PHILADELPHIA   (United States)

Author keywords

HARDI; structural connectivity

Indexed keywords

EID: 84894892987     PISSN: 21580014     EISSN: 21580022     Source Type: Journal    
DOI: 10.1089/brain.2011.0070     Document Type: Article

References (29)

1. Aboitiz F, Scheibel A.B., et al. 1992. Fiber composition of the human corpus callosum. Brain Res 598:143-153.
2. Anderson AW. 2005. Measurement of fiber orientation distributions using high angular resolution diffusion imaging. Magn Reson Med 54:1194-1206.
3. Balay S, Gropp W.D., et al. 1997. Efficient Management of Parallelism in Object Oriented Numerical Software Libraries. Birkh: Modern Software Tools in Scientific Computing.
4. Behrens T.E., Woolrich M.W., et al. 2003. Characterization and propagation of uncertainty in diffusion-weighted MR imaging. Magn Reson Med 50:1077-1088.
5. Bloy L, Ingalhalikar M, et al. 2011. White matter atlas generation using HARDI based automated parcellation. NeuroImage.
6. Calamante F, Tournier J.D., et al. 2010. Track-density imaging (TDI): super-resolution white matter imaging using whole-brain track-density mapping. NeuroImage 53:1233-1243.
7. Casanova M.F., El-Baz A, et al. 2010. A topographic study of minicolumnar core width by lamina comparison between autistic subjects and controls: possible minicolumnar disruption due to an anatomical element in-common to multiple laminae. Brain Pathol 20:451-458.
8. Descoteaux M, Deriche R, et al. 2009. Deterministic and probabilistic tractography based on complex fibre orientation distributions. IEEE Trans Med Imaging 28:269-286.
9. Desikan R.S., Segonne F, et al. 2006. An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest. NeuroImage 31:968-980.
10. Fischl B, Sereno M.I., et al. 1999. Cortical surface-based analysis. II: inflation, flattening, and a surface-based coordinate system. Neuroimage 9:195-207.
11. Gong G, He Y, et al. 2009a. Mapping anatomical connectivity patterns of human cerebral cortex using in vivo diffusion tensor imaging tractography. Cereb Cortex 19:524-536.
12. Gong G, Rosa-Neto P, et al. 2009b. Age- and gender-related differences in the cortical anatomical network. J Neurosci Off J Soc Neurosci 29:15684-15693.
13. Hagmann P, Cammoun L, et al. 2008. Mapping the structural core of human cerebral cortex. PLoS Biol 6:e159.
14. Hagmann P, Kurant M, et al. 2007. Mapping human whole-brain structural networks with diffusion MRI. PloS one 2:e597.
15. Hagmann P, Sporns O, et al. 2010. White matter maturation reshapes structural connectivity in the late developing human brain. Proc Natl Acad Sci U S A 107:19067-19072.
16. Heroux M.A., Bartlett R.A., et al. 2005. An overview of the Trilinos Project. ACM Trans Math Softw 31:397-423.
17. Highley J.R., Esiri M.M., et al. 1999. The size and fibre composition of the corpus callosum with respect to gender and schizophrenia: a post-mortem study. Brain 122 (Pt 1):99-110.
18. Iglesias J.E., Thompson P, et al. 2010. Discretizing stochastic tractography: a fast implementation. IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, The Netherlands, 2010.
19. Iturria-Medina Y, Canales-Rodrãguez E.J., et al. 2007. Characterizing brain anatomical connections using diffusion weighted MRI and graph theory. NeuroImage 36:645-660.
20. Iturria-Medina Y, Sotero R.C., et al. 2008. Studying the human brain anatomical network via diffusion-weighted MRI and Graph Theory. Neuroimage 40:1064-1076.
21. Jezzard P, Barnett A.S., et al. 1998. Characterization of and correction for eddy current artifacts in echo planar diffusion imaging. Magn Reson Med 39:801-812.
22. Konrad K, Eickhoff SB. 2010. Is the ADHD brain wired differently? A review on structural and functional connectivity in attention deficit hyperactivity disorder. Hum Brain Mapp 31:904-916.
23. Malcolm J.G., Shenton M.E., et al. 2009. Neural tractography using an unscented Kalman filter. Inf Process Med Imaging 21:126-138.
24. Robinson E.C., Hammers A, et al. 2010. Identifying population differences in whole-brain structural networks: a machine learning approach. Neuroimage 50:910-919.
25. Rubinov M, Sporns O. 2010. Complex network measures of brain connectivity: uses and interpretations. Neuroimage 52:1059-1069.
26. Tournier J.D., Calamante F, et al. 2007. Robust determination of the fibre orientation distribution in diffusion MRI: non-negativity constrained super-resolved spherical deconvolution. NeuroImage 35:1459-1472.
27. Tristãn-Vega A, Aja-Fernãndez S. 2010. DWI filtering using joint information for DTI and HARDI. Med Image Anal 14:205-218.
28. Yu Q, Sui J, et al. 2011. Altered Topological Properties of Functional Network Connectivity in Schizophrenia during Resting State: a small-world brain network study. PloS one 6:e25423.
29. Zalesky A, Fornito A, et al. 2010. Whole-brain anatomical networks: does the choice of nodes matter? NeuroImage 50:970-983.