Mapping human whole-brain structural networks with diffusion MRI

PLoS ONE

Volumn 2, Issue 7, 2007, Pages

  Hagmann, Patric ^a,b   Kurant, Maciej ^b   Gigandet, Xavier ^b   Thiran, Patrick ^b   Wedeen, Van J ^c   Meuli, Reto ^a   Thiran, Jean Philippe ^b  

^a LAUSANNE UNIVERSITY HOSPITAL   (Switzerland)

^b EPFL   (Switzerland)

^c HARVARD MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ARTICLE; BRAIN MAPPING; DIFFUSION WEIGHTED IMAGING; HUMAN; HUMAN EXPERIMENT; IMAGE QUALITY; NERVE CELL NETWORK; NERVE TRACT; NEUROSCIENCE; NORMAL HUMAN; SIGNAL NOISE RATIO; WHITE MATTER; BRAIN; HISTOLOGY; IMAGE PROCESSING; METHODOLOGY; NERVE FIBER; ORGAN SIZE; PERIAQUEDUCTAL GRAY MATTER; PHYSIOLOGY; ULTRASTRUCTURE;

ANIMALIA;

BRAIN; BRAIN MAPPING; DIFFUSION MAGNETIC RESONANCE IMAGING; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; NERVE FIBERS; ORGAN SIZE; PERIAQUEDUCTAL GRAY;

EID: 39349114740     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0000597     Document Type: Article

References (56)

1. Laughlin SB, Sejnowski TJ (2003) Communication in neuronal networks. Science 301: 1870-1874.
2. Koch C, Laurent G (1999) Complexity and the nervous system. SCIENCE 284: 96-98.
3. Tononi G, Edelman GM (1998) Consciousness and complexity. Science 282: 1846-1851.
4. Cherniak C (1994) Component placement optimization in the brain. J Neurosci 14: 2418-2427.
5. Burns GA, Young MP (2000) Analysis of the connectional organization of neural systems associated with the hippocampus in rats. Philos Trans R Soc Lond B Biol Sci 355: 55-70.
6. Scannell JW, Blakemore C, Young MP (1995) Analysis of connectivity in the cat cerebral cortex. J Neurosci 15: 1463-1483.
7. Scannell JW, Burns GA, Hilgetag CC, O'Neil MA, Young MP (1999) The connectional organization of the cortico-thalamic system of the cat. Cereb Cortex 9: 277-299.
8. Felleman DJ, Van Essen DC (1991) Distributed hierarchical processing in the primate cerebral cortex. Cereb Cortex 1: 1-47.
9. Crick F, Jones E (1993) Backwardness of human neuroanatomy. Nature 361: 109-110.
10. Sporns O, Tononi G, Kotter R (2005) The human conncetome: a structural description of the human brain. PLoS Comput Biol 1: e42.
11. Bota M, Dong HW, Swanson LW (2003) From gene networks to brain networks. Nat Neurosci 6: 795-799.
12. Le Bihan D (2003) Iooking into the functional architecture of the brain with diffusion MRI. NATURE REVIEWS NEUROSCIENCE 4: 469-480.
13. Tuch DS, Reese TG, Wiegell MR, Wedeen NJ (2003) Diffusion MRI of complex neural architecture. Neuron 40: 885-895.
14. Mori S, Zhang J (2006) Principles of diffusion tensor imaging and its applications to basic neuroscience research. Neuron 51: 527-539.
15. Hagmann P (2005) From diffinion MRI to brain connectornics [PhD Thesis]. Lausanne: Ecole Polytechnique Fédérale de Lausanne (EPFL). pp 127.
16. Wedeen VJ, Hagmann P, Tseng WY, Reese TG, Weisskoff RM (2005) Mapping complex tissue architecture with diffusion spectrum magnetic resonance imaging. Magn Reson Med 54: 1377-1386.
17. Stejskal E, Tanner J (1965) Spin diffusion measurements-spin echoes in presence of a time-dependent field gradient. Journal of chemical physics 42: 288-&.
18. Le Bihan D (1991) Molecular diffusion nuclear magnetic resonance imaging. Magn Reson Q 7: 1-30.
19. Le Bihan D (1995) Diffusion and Perfusion Magnetic Resonance Imaging: Applications to Functional MRI: Lippincott Williams&Wilkins.
20. Callaghan PT (1991) Principles of nuclear magnetic resonance microscopy. Oxford: Clarendon Press. pp XVII, 492 , 494 Taf.
21. Lin CP, Wedeen VJ, Chen JH, Yao C, Tseng WY (2003) Validation of diffusion spectrum magnetic resonance imaging with manganese-enhanced rat optic tracts and ex vivo phantoms. Neuroimage 19: 482-495.
22. Hagmann P, Reese T, Tseng W, Meuli R, Thiran J, et al. Diffusion Spectrum Imaging Tractography in Complex Cerebral White Matter: An Investigation of the Centrum Serniovale; 2004 Jul; Kyoto. pp. 623.
23. Kim B (2004) Geographical coarse graining of complex networks. PHYSICAL REVIEW LETTERS 93: -.
24. Albert R, Barabasi A (2002) Statistical mechanics of complex networks. REVIEWS OF MODERN PHYSICS 74: 47-97.
25. Albert R, Jeong H, Barabasi A (2000) Error and attack tolerance of complex networks. NATURE 406: 378-382.
26. Barrat A, Barthelemy M, Pastor-Satorras R, Vespignani A (2004) The architecture of complex weighted networks. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101: 3747-3752.
27. Sporns O, Zwi J (2004) The small world of the cerebral cortex. NEUROINFORMATICS 2: 145-162.
28. Humphries M, Gurney K, Prescott T (2006) The brainstem reticular formation is a small-world, not scale-free, network. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES 273: 503-511.
29. Eguiluz VM, Chialvo DR, Cecchi GA, Baliki M, Apkarian AV (2005) Scale-free brain functional networks. Phys Rev Lett 94: 018102.
30. Kaiser M, Hilgetag C (2004) Modelling the development of cortical systems networks. NEUROCOMPUTING 58-60: 297-302.
31. Amaral L, Scala A, Barthelemy M, Stanley H (2000) Classes of small-world networks. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNTIED STATES OF AMERICA 97: 11149-11152.
32. Rockel AJ, Hiorns RW, Powell TP (1980) The basic uniformity in structure of the neocortex. Brain 103: 221-244.
33. Hilgetag CC, Barbas H (2005) Developmental mechanics of the primate cerebral cortex. Anat Embryol (Berl) 210: 411-417.
34. Chen BL, Hali DH, Chklovskii DB (2006) Wiring optimization can relate neuronal structure and function. Proc Natl Acad Sci U S A 103: 4723-4728.
35. Klyachko VA, Stevens CF (2003) Connectivity optimization and the positioning of cortical areas. Proc Natl Acad Sci U S A 100: 7937-7941.
36. Chklovskii DB, Schikorki T, Stevens CF (2002) Wiring optimization in cortical circuits. Neuron 34: 341-347.
37. Zhang K, Sejnowski TJ (2000) A universal scaling law between gray matter and white matter of cerebral cortex. Proc Natl Acad Sci U S A 97: 5621-5626.
38. Kaiser M, Hilgetag CC (2006) Nonoptimal component placement, but short processing paths, due to long-distance projections in neural systems. PLoS Comput Biol 2: r95.
39. Watts D, Strogatz S (1998) Collective dynamics of 'Small-world' networks. NATURE 393: 440-442.
40. Kalna G, Higham D (2006) Clustering Coef□cients forWeighted Networks. University of Strathclyde Mathematics.
41. Saramaki J, Kivela M, Onnela J-P, Kaski K, Kertesz J (2006) Generalizations of the clustering coefficient to weighted complex networks. arXiv.org.
42. Maslov S, Sneppen K (2002) Specificity and stability in topology of protein networks. Science 296: 910-913.
43. Attwell D, Laughlin SP (2001) An energy budget for signaling in the grey matter of the brain J Cereb Blood Flow Metab 21: 1133-1145.
44. Simoncelli EP, Olshausen BA (2001) Natural image statistics and neural representation. Annu Rev Neurosci 24: 1193-1216.
45. Gray CM, Konig P, Engel AK, Singer W (1989) Oscillatory responses in cat visual cortex exhibit inter-columnar synchronization which reflects global stimulus properties. Nature 338: 334-337.
46. Hilgetag CC, Burns CA, O'Neill MA, Scannell JW, Young MP (2000) Anatomical connectivity defines the organization of clusters of cortical areas in the macaque monkey and the cat. Philos Trans R Soc Lond B Biol Sci 355: 91-110.
47. Hilgetag C, Kaiser M (2004) Clustered organization of cortical connectivity. NEUROINFORMATICS 2: 353-360.
48. Bartzokis G (2002) Schizophrenia: breakdown in the well-regulated lifelong process of brain development and maturation. Neuropsychopharmacology 27: 672-683.
49. Stam CJ, Jones BF, Nolte G, Breakspear M, Scheltens P (2007) Small-world networks and functional connectivity in Alzheimer's disease. Cereb Cortex 17: 92-99.
50. Kubicki M, Westin CF, Nestor PG, Wible CG, Frumin M, et al. (2003) Cingulate fasciculus integrity disruption in schizophrenia. a magnetic resonance diffusion tensor imaging study. Biol Psychiatry 54: 1171-1180.
51. Rose SE, Chalk JB, Janke AL, Strudwick MW, Windus LC, et al. (2006) Evidence of altered prefrontal-thalamic circuitry in schizophrenia: an optimized diffusion MRI study. Neuroimage 32: 16-22.
52. Schmahmann JD, Pandya DN, Wang R, Dai G, D'Arceuil HE, et al. (2007) Association fibre pathways of the brain: parallel observations from diffusion spectrum imaging and autoradiography. Brain 130: 630-653.
53. Grill-Spector K, Malach R (2004) The human visual cortex. Annu Rev Neurosci 27: 649-677.
54. Born RT, Bradley DC (2005) Structure and function of visual area MT. Annu Rev Neurosci 28: 157-189.
55. Sincich LC, Horton JC (2005) The circuitry of V1 and V2: integration of color, form, and motion. Annu Rev Neurosci 28: 303-326.
56. Kennedy H, Dehay C, Bullier J (1986) Organization of the callosal connections of visual areas V1 and V2 in the macaque monkey. J Comp Neurol 247: 398-415.