-
2
-
-
69949158093
-
What has natural variation taught us about plant development, physiology, and adaptation?
-
Alonso-Blanco C., Aarts M.G., Bentsink L., Keurentjes J.J., Reymond M., Vreugdenhil D., Koornneef M. What has natural variation taught us about plant development, physiology, and adaptation?. Plant Cell 2009, 21:1877-1896.
-
(2009)
Plant Cell
, vol.21
, pp. 1877-1896
-
-
Alonso-Blanco, C.1
Aarts, M.G.2
Bentsink, L.3
Keurentjes, J.J.4
Reymond, M.5
Vreugdenhil, D.6
Koornneef, M.7
-
3
-
-
84880936203
-
Hierarchical nuclear and cytoplasmic genetic architectures for plant growth and defense within Arabidopsis
-
Joseph B., Corwin J.A., Zust T., Li B., Iravani M., Schaepman-Strub G., Turnbull L.A., Kliebenstein D.J. Hierarchical nuclear and cytoplasmic genetic architectures for plant growth and defense within Arabidopsis. Plant Cell 2013, 25:1929-1945.
-
(2013)
Plant Cell
, vol.25
, pp. 1929-1945
-
-
Joseph, B.1
Corwin, J.A.2
Zust, T.3
Li, B.4
Iravani, M.5
Schaepman-Strub, G.6
Turnbull, L.A.7
Kliebenstein, D.J.8
-
4
-
-
84876818452
-
The loci of repeated evolution: a catalog of genetic hotspots of phenotypic variation
-
Martin A., Orgogozo V. The loci of repeated evolution: a catalog of genetic hotspots of phenotypic variation. Evolution 2013, 67:1235-1250.
-
(2013)
Evolution
, vol.67
, pp. 1235-1250
-
-
Martin, A.1
Orgogozo, V.2
-
5
-
-
0035671407
-
The genetic architecture of quantitative traits
-
Mackay T.F. The genetic architecture of quantitative traits. Annu Rev Genet 2001, 35:303-339.
-
(2001)
Annu Rev Genet
, vol.35
, pp. 303-339
-
-
Mackay, T.F.1
-
6
-
-
78549289532
-
Towards identifying genes underlying ecologically relevant traits in Arabidopsis thaliana
-
Bergelson J., Roux F. Towards identifying genes underlying ecologically relevant traits in Arabidopsis thaliana. Nat Rev Genet 2010, 11:867-879.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 867-879
-
-
Bergelson, J.1
Roux, F.2
-
7
-
-
84855268714
-
Natural variation in Arabidopsis: from molecular genetics to ecological genomics
-
Weigel D. Natural variation in Arabidopsis: from molecular genetics to ecological genomics. Plant Physiol 2012, 158:2-22.
-
(2012)
Plant Physiol
, vol.158
, pp. 2-22
-
-
Weigel, D.1
-
8
-
-
84876939112
-
3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture
-
Topp C.N., Iyer-Pascuzzi A.S., Anderson J.T., Lee C.R., Zurek P.R., Symonova O., Zheng Y., Bucksch A., Mileyko Y., Galkovskyi T., et al. 3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture. Proc Natl Acad Sci U S. A 2013, 110:E1695-E1704.
-
(2013)
Proc Natl Acad Sci U S. A
, vol.110
-
-
Topp, C.N.1
Iyer-Pascuzzi, A.S.2
Anderson, J.T.3
Lee, C.R.4
Zurek, P.R.5
Symonova, O.6
Zheng, Y.7
Bucksch, A.8
Mileyko, Y.9
Galkovskyi, T.10
-
9
-
-
84887085019
-
High-throughput computer vision introduces the time axis to a quantitative trait map of a plant growth response
-
doi: 113.153346
-
Moore C.R., Johnson L.S., Kwak I.Y., Livny M., Broman K.W., Spalding E.P. High-throughput computer vision introduces the time axis to a quantitative trait map of a plant growth response. Genetics 2013, doi: 113.153346.
-
(2013)
Genetics
-
-
Moore, C.R.1
Johnson, L.S.2
Kwak, I.Y.3
Livny, M.4
Broman, K.W.5
Spalding, E.P.6
-
10
-
-
84856585221
-
Visualizing the genetic landscape of Arabidopsis seed performance
-
Joosen R.V., Arends D., Willems L.A., Ligterink W., Jansen R.C., Hilhorst H.W. Visualizing the genetic landscape of Arabidopsis seed performance. Plant Physiol 2012, 158:570-589.
-
(2012)
Plant Physiol
, vol.158
, pp. 570-589
-
-
Joosen, R.V.1
Arends, D.2
Willems, L.A.3
Ligterink, W.4
Jansen, R.C.5
Hilhorst, H.W.6
-
11
-
-
84856179570
-
Mapping of ionomic traits in Mimulus guttatus reveals Mo and Cd QTLs that colocalize with MOT1 homologues
-
Lowry D.B., Sheng C.C., Zhu Z., Juenger T.E., Lahner B., Salt D.E., Willis J.H. Mapping of ionomic traits in Mimulus guttatus reveals Mo and Cd QTLs that colocalize with MOT1 homologues. PLoS One 2012, 7:e30730.
-
(2012)
PLoS One
, vol.7
-
-
Lowry, D.B.1
Sheng, C.C.2
Zhu, Z.3
Juenger, T.E.4
Lahner, B.5
Salt, D.E.6
Willis, J.H.7
-
12
-
-
84878448872
-
Identifying genotype-by-environment interactions in the metabolism of germinating arabidopsis seeds using generalized genetical genomics
-
Joosen R.V., Arends D., Li Y., Willems L.A., Keurentjes J.J., Ligterink W., Jansen R.C., Hilhorst H.W. Identifying genotype-by-environment interactions in the metabolism of germinating arabidopsis seeds using generalized genetical genomics. Plant Physiol 2013, 162:553-566.
-
(2013)
Plant Physiol
, vol.162
, pp. 553-566
-
-
Joosen, R.V.1
Arends, D.2
Li, Y.3
Willems, L.A.4
Keurentjes, J.J.5
Ligterink, W.6
Jansen, R.C.7
Hilhorst, H.W.8
-
13
-
-
84863669380
-
Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis
-
Routaboul J.M., Dubos C., Beck G., Marquis C., Bidzinski P., Loudet O., Lepiniec L. Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis. J Exp Bot 2012, 63:3749-3764.
-
(2012)
J Exp Bot
, vol.63
, pp. 3749-3764
-
-
Routaboul, J.M.1
Dubos, C.2
Beck, G.3
Marquis, C.4
Bidzinski, P.5
Loudet, O.6
Lepiniec, L.7
-
14
-
-
84858843257
-
Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures
-
Cubillos F.A., Yansouni J., Khalili H., Balzergue S., Elftieh S., Martin-Magniette M.L., Serrand Y., Lepiniec L., Baud S., Dubreucq B., et al. Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures. BMC Genomics 2012, 13:117.
-
(2012)
BMC Genomics
, vol.13
, pp. 117
-
-
Cubillos, F.A.1
Yansouni, J.2
Khalili, H.3
Balzergue, S.4
Elftieh, S.5
Martin-Magniette, M.L.6
Serrand, Y.7
Lepiniec, L.8
Baud, S.9
Dubreucq, B.10
-
15
-
-
84886561316
-
Expression quantitative trait locus mapping across water availability environments reveals contrasting associations with genomic features in Arabidopsis
-
Lowry D.B., Logan T.L., Santuari L., Hardtke C.S., Richards J.H., Derose-Wilson L.J., McKay J.K., Sen S., Juenger T.E. Expression quantitative trait locus mapping across water availability environments reveals contrasting associations with genomic features in Arabidopsis. Plant Cell 2013, 25:3266-3279.
-
(2013)
Plant Cell
, vol.25
, pp. 3266-3279
-
-
Lowry, D.B.1
Logan, T.L.2
Santuari, L.3
Hardtke, C.S.4
Richards, J.H.5
Derose-Wilson, L.J.6
McKay, J.K.7
Sen, S.8
Juenger, T.E.9
-
16
-
-
84876169511
-
Genetical genomics reveals large scale genotype-by-environment interactions in Arabidopsis thaliana
-
Snoek L.B., Terpstra I.R., Dekter R., Van den Ackerveken G., Peeters A.J. Genetical genomics reveals large scale genotype-by-environment interactions in Arabidopsis thaliana. Front Genet 2012, 3:317.
-
(2012)
Front Genet
, vol.3
, pp. 317
-
-
Snoek, L.B.1
Terpstra, I.R.2
Dekter, R.3
Van den Ackerveken, G.4
Peeters, A.J.5
-
17
-
-
84873488869
-
Mendelian and non-Mendelian regulation of gene expression in maize
-
Li L., Petsch K., Shimizu R., Liu S., Xu W.W., Ying K., Yu J., Scanlon M.J., Schnable P.S., Timmermans M.C., et al. Mendelian and non-Mendelian regulation of gene expression in maize. PLoS Genet 2013, 9:e1003202.
-
(2013)
PLoS Genet
, vol.9
-
-
Li, L.1
Petsch, K.2
Shimizu, R.3
Liu, S.4
Xu, W.W.5
Ying, K.6
Yu, J.7
Scanlon, M.J.8
Schnable, P.S.9
Timmermans, M.C.10
-
18
-
-
84874991260
-
Patterns of population epigenomic diversity
-
Schmitz R.J., Schultz M.D., Urich M.A., Nery J.R., Pelizzola M., Libiger O., Alix A., McCosh R.B., Chen H., Schork N.J., et al. Patterns of population epigenomic diversity. Nature 2013, 495:193-198.
-
(2013)
Nature
, vol.495
, pp. 193-198
-
-
Schmitz, R.J.1
Schultz, M.D.2
Urich, M.A.3
Nery, J.R.4
Pelizzola, M.5
Libiger, O.6
Alix, A.7
McCosh, R.B.8
Chen, H.9
Schork, N.J.10
-
19
-
-
84884688892
-
Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population
-
Schmitz R.J., He Y., Valdes-Lopez O., Khan S.M., Joshi T., Urich M.A., Nery J.R., Diers B., Xu D., Stacey G., et al. Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population. Genome Res 2013, 23:1663-1674.
-
(2013)
Genome Res
, vol.23
, pp. 1663-1674
-
-
Schmitz, R.J.1
He, Y.2
Valdes-Lopez, O.3
Khan, S.M.4
Joshi, T.5
Urich, M.A.6
Nery, J.R.7
Diers, B.8
Xu, D.9
Stacey, G.10
-
20
-
-
84884697475
-
Epigenetic and genetic influences on DNA methylation variation in maize populations
-
Eichten S.R., Briskine R., Song J., Li Q., Swanson-Wagner R., Hermanson P.J., Waters A.J., Starr E., West P.T., Tiffin P., et al. Epigenetic and genetic influences on DNA methylation variation in maize populations. Plant Cell 2013, 25:2783-2797.
-
(2013)
Plant Cell
, vol.25
, pp. 2783-2797
-
-
Eichten, S.R.1
Briskine, R.2
Song, J.3
Li, Q.4
Swanson-Wagner, R.5
Hermanson, P.J.6
Waters, A.J.7
Starr, E.8
West, P.T.9
Tiffin, P.10
-
21
-
-
84893760043
-
A legume biofortification quandary: variability and genetic control of seed coat micronutrient accumulation in common beans
-
Blair M.W., Izquierdo P., Astudillo C., Grusak M.A. A legume biofortification quandary: variability and genetic control of seed coat micronutrient accumulation in common beans. Front Plant Sci 2013, 4:275.
-
(2013)
Front Plant Sci
, vol.4
, pp. 275
-
-
Blair, M.W.1
Izquierdo, P.2
Astudillo, C.3
Grusak, M.A.4
-
22
-
-
34848837299
-
Linking metabolic QTLs with network and cis-eQTLs controlling biosynthetic pathways
-
Wentzell A.M., Rowe H.C., Hansen B.G., Ticconi C., Halkier B.A., Kliebenstein D.J. Linking metabolic QTLs with network and cis-eQTLs controlling biosynthetic pathways. PLoS Genet 2007, 3:1687-1701.
-
(2007)
PLoS Genet
, vol.3
, pp. 1687-1701
-
-
Wentzell, A.M.1
Rowe, H.C.2
Hansen, B.G.3
Ticconi, C.4
Halkier, B.A.5
Kliebenstein, D.J.6
-
23
-
-
84865544969
-
A gain-of-function polymorphism controlling complex traits and fitness in nature
-
Prasad K.V., Song B.H., Olson-Manning C., Anderson J.T., Lee C.R., Schranz M.E., Windsor A.J., Clauss M.J., Manzaneda A.J., Naqvi I., et al. A gain-of-function polymorphism controlling complex traits and fitness in nature. Science 2012, 337:1081-1084.
-
(2012)
Science
, vol.337
, pp. 1081-1084
-
-
Prasad, K.V.1
Song, B.H.2
Olson-Manning, C.3
Anderson, J.T.4
Lee, C.R.5
Schranz, M.E.6
Windsor, A.J.7
Clauss, M.J.8
Manzaneda, A.J.9
Naqvi, I.10
-
24
-
-
79960956431
-
Quantitative and qualitative stem rust resistance factors in barley are associated with transcriptional suppression of defense regulons
-
Moscou M.J., Lauter N., Steffenson B., Wise R.P. Quantitative and qualitative stem rust resistance factors in barley are associated with transcriptional suppression of defense regulons. PLoS Genet 2011, 7:e1002208.
-
(2011)
PLoS Genet
, vol.7
-
-
Moscou, M.J.1
Lauter, N.2
Steffenson, B.3
Wise, R.P.4
-
25
-
-
84859200623
-
Phenotypic plasticity, QTL mapping and genomic characterization of bud set in black poplar
-
Fabbrini F., Gaudet M., Bastien C., Zaina G., Harfouche A., Beritognolo I., Marron N., Morgante M., Scarascia-Mugnozza G., Sabatti M. Phenotypic plasticity, QTL mapping and genomic characterization of bud set in black poplar. BMC Plant Biol 2012, 12:47.
-
(2012)
BMC Plant Biol
, vol.12
, pp. 47
-
-
Fabbrini, F.1
Gaudet, M.2
Bastien, C.3
Zaina, G.4
Harfouche, A.5
Beritognolo, I.6
Marron, N.7
Morgante, M.8
Scarascia-Mugnozza, G.9
Sabatti, M.10
-
26
-
-
26944454449
-
Role of FRIGIDA and FLOWERING LOCUS C in determining variation in flowering time of Arabidopsis
-
Shindo C., Aranzana M.J., Lister C., Baxter C., Nicholls C., Nordborg M., Dean C. Role of FRIGIDA and FLOWERING LOCUS C in determining variation in flowering time of Arabidopsis. Plant Physiol 2005, 138:1163-1173.
-
(2005)
Plant Physiol
, vol.138
, pp. 1163-1173
-
-
Shindo, C.1
Aranzana, M.J.2
Lister, C.3
Baxter, C.4
Nicholls, C.5
Nordborg, M.6
Dean, C.7
-
27
-
-
82755171802
-
Altitudinal and climatic adaptation is mediated by flowering traits and FRIFLC, and PHYC genes in Arabidopsis
-
Mendez-Vigo B., Pico F.X., Ramiro M., Martinez-Zapater J.M., Alonso-Blanco C. Altitudinal and climatic adaptation is mediated by flowering traits and FRIFLC, and PHYC genes in Arabidopsis. Plant Physiol 2011, 157:1942-1955.
-
(2011)
Plant Physiol
, vol.157
, pp. 1942-1955
-
-
Mendez-Vigo, B.1
Pico, F.X.2
Ramiro, M.3
Martinez-Zapater, J.M.4
Alonso-Blanco, C.5
-
28
-
-
84884613744
-
Arabidopsis semidwarfs evolved from independent mutations in GA20ox1, ortholog to green revolution dwarf alleles in rice and barley
-
Barboza L., Effgen S., Alonso-Blanco C., Kooke R., Keurentjes J.J., Koornneef M., Alcazar R. Arabidopsis semidwarfs evolved from independent mutations in GA20ox1, ortholog to green revolution dwarf alleles in rice and barley. Proc Natl Acad Sci U S A 2013, 110:15818-15823.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 15818-15823
-
-
Barboza, L.1
Effgen, S.2
Alonso-Blanco, C.3
Kooke, R.4
Keurentjes, J.J.5
Koornneef, M.6
Alcazar, R.7
-
29
-
-
84863877848
-
Evidence for a natural allelic series at the maize domestication locus teosinte branched1
-
Studer A.J., Doebley J.F. Evidence for a natural allelic series at the maize domestication locus teosinte branched1. Genetics 2012, 191:951-958.
-
(2012)
Genetics
, vol.191
, pp. 951-958
-
-
Studer, A.J.1
Doebley, J.F.2
-
30
-
-
84869768769
-
Background-dependent effects of polyglutamine variation in the Arabidopsis thaliana gene ELF3
-
Undurraga S.F., Press M.O., Legendre M., Bujdoso N., Bale J., Wang H., Davis S.J., Verstrepen K.J., Queitsch C. Background-dependent effects of polyglutamine variation in the Arabidopsis thaliana gene ELF3. Proc Natl Acad Sci U S A 2012, 109:19363-19367.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 19363-19367
-
-
Undurraga, S.F.1
Press, M.O.2
Legendre, M.3
Bujdoso, N.4
Bale, J.5
Wang, H.6
Davis, S.J.7
Verstrepen, K.J.8
Queitsch, C.9
-
31
-
-
84870245585
-
Role of vernalization and of duplicated FLOWERING LOCUS C in the perennial Arabidopsis lyrata
-
Kemi U., Niittyvuopio A., Toivainen T., Pasanen A., Quilot-Turion B., Holm K., Lagercrantz U., Savolainen O., Kuittinen H. Role of vernalization and of duplicated FLOWERING LOCUS C in the perennial Arabidopsis lyrata. New Phytol 2013, 197:323-335.
-
(2013)
New Phytol
, vol.197
, pp. 323-335
-
-
Kemi, U.1
Niittyvuopio, A.2
Toivainen, T.3
Pasanen, A.4
Quilot-Turion, B.5
Holm, K.6
Lagercrantz, U.7
Savolainen, O.8
Kuittinen, H.9
-
32
-
-
84872008249
-
PEP1 of Arabis alpina is encoded by two overlapping genes that contribute to natural genetic variation in perennial flowering
-
Albani M.C., Castaings L., Wotzel S., Mateos J.L., Wunder J., Wang R., Reymond M., Coupland G. PEP1 of Arabis alpina is encoded by two overlapping genes that contribute to natural genetic variation in perennial flowering. PLoS Genet 2012, 8:e1003130.
-
(2012)
PLoS Genet
, vol.8
-
-
Albani, M.C.1
Castaings, L.2
Wotzel, S.3
Mateos, J.L.4
Wunder, J.5
Wang, R.6
Reymond, M.7
Coupland, G.8
-
33
-
-
84864829347
-
Novel natural alleles at FLC and LVR loci account for enhanced vernalization responses in Arabidopsis thaliana
-
Sanchez-Bermejo E., Mendez-Vigo B., Pico F.X., Martinez-Zapater J.M., Alonso-Blanco C. Novel natural alleles at FLC and LVR loci account for enhanced vernalization responses in Arabidopsis thaliana. Plant Cell Environ 2012, 35:1672-1684.
-
(2012)
Plant Cell Environ
, vol.35
, pp. 1672-1684
-
-
Sanchez-Bermejo, E.1
Mendez-Vigo, B.2
Pico, F.X.3
Martinez-Zapater, J.M.4
Alonso-Blanco, C.5
-
34
-
-
84864740688
-
Quantitative modulation of polycomb silencing underlies natural variation in vernalization
-
Coustham V., Li P., Strange A., Lister C., Song J., Dean C. Quantitative modulation of polycomb silencing underlies natural variation in vernalization. Science 2012, 337:584-587.
-
(2012)
Science
, vol.337
, pp. 584-587
-
-
Coustham, V.1
Li, P.2
Strange, A.3
Lister, C.4
Song, J.5
Dean, C.6
-
35
-
-
84864670098
-
High-resolution mapping of a fruit firmness-related quantitative trait locus in tomato reveals epistatic interactions associated with a complex combinatorial locus
-
Chapman N.H., Bonnet J., Grivet L., Lynn J., Graham N., Smith R., Sun G., Walley P.G., Poole M., Causse M., et al. High-resolution mapping of a fruit firmness-related quantitative trait locus in tomato reveals epistatic interactions associated with a complex combinatorial locus. Plant Physiol 2012, 159:1644-1657.
-
(2012)
Plant Physiol
, vol.159
, pp. 1644-1657
-
-
Chapman, N.H.1
Bonnet, J.2
Grivet, L.3
Lynn, J.4
Graham, N.5
Smith, R.6
Sun, G.7
Walley, P.G.8
Poole, M.9
Causse, M.10
-
36
-
-
60149097557
-
Complex rearrangements lead to novel chimeric gene fusion polymorphisms at the Arabidopsis thaliana MAF2-5 flowering time gene cluster
-
Caicedo A.L., Richards C., Ehrenreich I.M., Purugganan M.D. Complex rearrangements lead to novel chimeric gene fusion polymorphisms at the Arabidopsis thaliana MAF2-5 flowering time gene cluster. Mol Biol Evol 2009, 26:699-711.
-
(2009)
Mol Biol Evol
, vol.26
, pp. 699-711
-
-
Caicedo, A.L.1
Richards, C.2
Ehrenreich, I.M.3
Purugganan, M.D.4
-
37
-
-
78751650831
-
Natural diversity in flowering responses of Arabidopsis thaliana caused by variation in a tandem gene array
-
Rosloski S.M., Jali S.S., Balasubramanian S., Weigel D., Grbic V. Natural diversity in flowering responses of Arabidopsis thaliana caused by variation in a tandem gene array. Genetics 2010, 186:263-276.
-
(2010)
Genetics
, vol.186
, pp. 263-276
-
-
Rosloski, S.M.1
Jali, S.S.2
Balasubramanian, S.3
Weigel, D.4
Grbic, V.5
-
38
-
-
84874258756
-
Association of functional nucleotide polymorphisms at DTH2 with the northward expansion of rice cultivation in Asia
-
Wu W., Zheng X.M., Lu G., Zhong Z., Gao H., Chen L., Wu C., Wang H.J., Wang Q., Zhou K., et al. Association of functional nucleotide polymorphisms at DTH2 with the northward expansion of rice cultivation in Asia. Proc Natl Acad Sci U S A 2013, 110:2775-2780.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 2775-2780
-
-
Wu, W.1
Zheng, X.M.2
Lu, G.3
Zhong, Z.4
Gao, H.5
Chen, L.6
Wu, C.7
Wang, H.J.8
Wang, Q.9
Zhou, K.10
-
39
-
-
84873082587
-
Effect of inter- and intragenic epistasis on the heritability of oil content in rapeseed (Brassica napus L.)
-
Wurschum T., Maurer H.P., Dreyer F., Reif J.C. Effect of inter- and intragenic epistasis on the heritability of oil content in rapeseed (Brassica napus L.). Theor Appl Genet 2013, 126:435-441.
-
(2013)
Theor Appl Genet
, vol.126
, pp. 435-441
-
-
Wurschum, T.1
Maurer, H.P.2
Dreyer, F.3
Reif, J.C.4
-
40
-
-
84864469065
-
Epistatic natural allelic variation reveals a function of AGAMOUS-LIKE6 in axillary bud formation in Arabidopsis
-
Huang X., Effgen S., Meyer R.C., Theres K., Koornneef M. Epistatic natural allelic variation reveals a function of AGAMOUS-LIKE6 in axillary bud formation in Arabidopsis. Plant Cell 2012, 24:2364-2379.
-
(2012)
Plant Cell
, vol.24
, pp. 2364-2379
-
-
Huang, X.1
Effgen, S.2
Meyer, R.C.3
Theres, K.4
Koornneef, M.5
-
41
-
-
84872476721
-
Genetic basis of local adaptation and flowering time variation in Arabidopsis lyrata
-
Leinonen P.H., Remington D.L., Leppala J., Savolainen O. Genetic basis of local adaptation and flowering time variation in Arabidopsis lyrata. Mol Ecol 2013, 22:709-723.
-
(2013)
Mol Ecol
, vol.22
, pp. 709-723
-
-
Leinonen, P.H.1
Remington, D.L.2
Leppala, J.3
Savolainen, O.4
-
42
-
-
84880319873
-
Multiple loci and genetic interactions involving flowering time genes regulate stem branching among natural variants of Arabidopsis
-
Huang X., Ding J., Effgen S., Turck F., Koornneef M. Multiple loci and genetic interactions involving flowering time genes regulate stem branching among natural variants of Arabidopsis. New Phytol 2013, 199:843-857.
-
(2013)
New Phytol
, vol.199
, pp. 843-857
-
-
Huang, X.1
Ding, J.2
Effgen, S.3
Turck, F.4
Koornneef, M.5
-
43
-
-
84873513977
-
The flowering repressor SVP underlies a novel Arabidopsis thaliana QTL interacting with the genetic background
-
Mendez-Vigo B., Martinez-Zapater J.M., Alonso-Blanco C. The flowering repressor SVP underlies a novel Arabidopsis thaliana QTL interacting with the genetic background. PLoS Genet 2013, 9:e1003289.
-
(2013)
PLoS Genet
, vol.9
-
-
Mendez-Vigo, B.1
Martinez-Zapater, J.M.2
Alonso-Blanco, C.3
-
44
-
-
84865340598
-
The time required for dormancy release in Arabidopsis is determined by DELAY OF GERMINATION1 protein levels in freshly harvested seeds
-
Nakabayashi K., Bartsch M., Xiang Y., Miatton E., Pellengahr S., Yano R., Seo M., Soppe W.J. The time required for dormancy release in Arabidopsis is determined by DELAY OF GERMINATION1 protein levels in freshly harvested seeds. Plant Cell 2012, 24:2826-2838.
-
(2012)
Plant Cell
, vol.24
, pp. 2826-2838
-
-
Nakabayashi, K.1
Bartsch, M.2
Xiang, Y.3
Miatton, E.4
Pellengahr, S.5
Yano, R.6
Seo, M.7
Soppe, W.J.8
-
45
-
-
84864620955
-
Allelic heterogeneity and trade-off shape natural variation for response to soil micronutrient
-
Poormohammad Kiani S., Trontin C., Andreatta M., Simon M., Robert T., Salt D.E., Loudet O. Allelic heterogeneity and trade-off shape natural variation for response to soil micronutrient. PLoS Genet 2012, 8:e1002814.
-
(2012)
PLoS Genet
, vol.8
-
-
Poormohammad Kiani, S.1
Trontin, C.2
Andreatta, M.3
Simon, M.4
Robert, T.5
Salt, D.E.6
Loudet, O.7
-
46
-
-
84867853254
-
Natural Arabidopsis brx loss-of-function alleles confer root adaptation to acidic soil
-
Gujas B., Alonso-Blanco C., Hardtke C.S. Natural Arabidopsis brx loss-of-function alleles confer root adaptation to acidic soil. Curr Biol 2012, 22:1962-1968.
-
(2012)
Curr Biol
, vol.22
, pp. 1962-1968
-
-
Gujas, B.1
Alonso-Blanco, C.2
Hardtke, C.S.3
-
47
-
-
84867193262
-
Natural enemies drive geographic variation in plant defenses
-
Züst T., Heichinger C., Grossniklaus U., Harrington R., Kliebenstein D.J., Turnbull L.A. Natural enemies drive geographic variation in plant defenses. Science 2012, 338:116-119.
-
(2012)
Science
, vol.338
, pp. 116-119
-
-
Züst, T.1
Heichinger, C.2
Grossniklaus, U.3
Harrington, R.4
Kliebenstein, D.J.5
Turnbull, L.A.6
-
48
-
-
80053612343
-
A map of local adaptation in Arabidopsis thaliana
-
Fournier-Level A., Korte A., Cooper M.D., Nordborg M., Schmitt J., Wilczek A.M. A map of local adaptation in Arabidopsis thaliana. Science 2011, 334:86-89.
-
(2011)
Science
, vol.334
, pp. 86-89
-
-
Fournier-Level, A.1
Korte, A.2
Cooper, M.D.3
Nordborg, M.4
Schmitt, J.5
Wilczek, A.M.6
-
49
-
-
84864287273
-
Spatially and temporally varying selection on intrapopulation quantitative trait loci for a life history trade-off in Mimulus guttatus
-
Mojica J.P., Lee Y.W., Willis J.H., Kelly J.K. Spatially and temporally varying selection on intrapopulation quantitative trait loci for a life history trade-off in Mimulus guttatus. Mol Ecol 2012, 21:3718-3728.
-
(2012)
Mol Ecol
, vol.21
, pp. 3718-3728
-
-
Mojica, J.P.1
Lee, Y.W.2
Willis, J.H.3
Kelly, J.K.4
-
50
-
-
84872478895
-
Genetic trade-offs and conditional neutrality contribute to local adaptation
-
Anderson J.T., Lee C.R., Rushworth C.A., Colautti R.I., Mitchell-Olds T. Genetic trade-offs and conditional neutrality contribute to local adaptation. Mol Ecol 2013, 22:699-708.
-
(2013)
Mol Ecol
, vol.22
, pp. 699-708
-
-
Anderson, J.T.1
Lee, C.R.2
Rushworth, C.A.3
Colautti, R.I.4
Mitchell-Olds, T.5
-
51
-
-
84884417940
-
Complex genetic effects on early vegetative development shape resource allocation differences between Arabidopsis lyrata populations
-
Remington D.L., Leinonen P.H., Leppala J., Savolainen O. Complex genetic effects on early vegetative development shape resource allocation differences between Arabidopsis lyrata populations. Genetics 2013, 185:1087-1102.
-
(2013)
Genetics
, vol.185
, pp. 1087-1102
-
-
Remington, D.L.1
Leinonen, P.H.2
Leppala, J.3
Savolainen, O.4
-
52
-
-
84891369649
-
Genetic mapping of adaptation reveals fitness tradeoffs in Arabidopsis thaliana
-
Agren J., Oakley C.G., McKay J.K., Lovell J.T., Schemske D.W. Genetic mapping of adaptation reveals fitness tradeoffs in Arabidopsis thaliana. Proc Natl Acad Sci U S. A 2013, 110:21077-21082.
-
(2013)
Proc Natl Acad Sci U S. A
, vol.110
, pp. 21077-21082
-
-
Agren, J.1
Oakley, C.G.2
McKay, J.K.3
Lovell, J.T.4
Schemske, D.W.5
-
53
-
-
84874740815
-
Pleiotropy in the wild: the dormancy gene DOG1 exerts cascading control on life cycles
-
Chiang G.C., Barua D., Dittmar E., Kramer E.M., de Casas R.R., Donohue K. Pleiotropy in the wild: the dormancy gene DOG1 exerts cascading control on life cycles. Evolution 2013, 67:883-893.
-
(2013)
Evolution
, vol.67
, pp. 883-893
-
-
Chiang, G.C.1
Barua, D.2
Dittmar, E.3
Kramer, E.M.4
de Casas, R.R.5
Donohue, K.6
-
54
-
-
79959845558
-
Cis- and trans-Regulation of miR163 and target genes confers natural variation of secondary metabolites in two Arabidopsis species and their allopolyploids
-
Ng D.W., Zhang C., Miller M., Palmer G., Whiteley M., Tholl D., Chen Z.J. cis- and trans-Regulation of miR163 and target genes confers natural variation of secondary metabolites in two Arabidopsis species and their allopolyploids. Plant Cell 2011, 23:1729-1740.
-
(2011)
Plant Cell
, vol.23
, pp. 1729-1740
-
-
Ng, D.W.1
Zhang, C.2
Miller, M.3
Palmer, G.4
Whiteley, M.5
Tholl, D.6
Chen, Z.J.7
-
55
-
-
84856227256
-
Natural variation in biogenesis efficiency of individual Arabidopsis thaliana microRNAs
-
Todesco M., Balasubramanian S., Cao J., Ott F., Sureshkumar S., Schneeberger K., Meyer R.C., Altmann T., Weigel D. Natural variation in biogenesis efficiency of individual Arabidopsis thaliana microRNAs. Curr Biol 2012, 22:166-170.
-
(2012)
Curr Biol
, vol.22
, pp. 166-170
-
-
Todesco, M.1
Balasubramanian, S.2
Cao, J.3
Ott, F.4
Sureshkumar, S.5
Schneeberger, K.6
Meyer, R.C.7
Altmann, T.8
Weigel, D.9
-
56
-
-
84885341442
-
Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence
-
Houston K., McKim S.M., Comadran J., Bonar N., Druka I., Uzrek N., Cirillo E., Guzy-Wrobelska J., Collins N.C., Halpin C., et al. Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence. Proc Natl Acad Sci U S A 2013, 110:16675-21680.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 16675-21680
-
-
Houston, K.1
McKim, S.M.2
Comadran, J.3
Bonar, N.4
Druka, I.5
Uzrek, N.6
Cirillo, E.7
Guzy-Wrobelska, J.8
Collins, N.C.9
Halpin, C.10
-
57
-
-
0042190562
-
Attenuation of FLOWERING LOCUS C activity as a mechanism for the evolution of summer-annual flowering behavior in Arabidopsis
-
Michaels S.D., He Y., Scortecci K.C., Amasino R.M. Attenuation of FLOWERING LOCUS C activity as a mechanism for the evolution of summer-annual flowering behavior in Arabidopsis. Proc Natl Acad Sci U S A 2003, 100:10102-10107.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 10102-10107
-
-
Michaels, S.D.1
He, Y.2
Scortecci, K.C.3
Amasino, R.M.4
-
58
-
-
77955610825
-
Diversity of flowering responses in wild Arabidopsis thaliana strains
-
Lempe J., Balasubramanian S., Sureshkumar S., Singh A., Schmid M., Weigel D. Diversity of flowering responses in wild Arabidopsis thaliana strains. PLoS Genet 2005, 1:109-118.
-
(2005)
PLoS Genet
, vol.1
, pp. 109-118
-
-
Lempe, J.1
Balasubramanian, S.2
Sureshkumar, S.3
Singh, A.4
Schmid, M.5
Weigel, D.6
-
59
-
-
23344452977
-
FRIGIDA-independent variation in flowering time of natural Arabidopsis thaliana accessions
-
Werner J.D., Borevitz J.O., Uhlenhaut N.H., Ecker J.R., Chory J., Weigel D. FRIGIDA-independent variation in flowering time of natural Arabidopsis thaliana accessions. Genetics 2005, 170:1197-1207.
-
(2005)
Genetics
, vol.170
, pp. 1197-1207
-
-
Werner, J.D.1
Borevitz, J.O.2
Uhlenhaut, N.H.3
Ecker, J.R.4
Chory, J.5
Weigel, D.6
-
60
-
-
70350170139
-
Splicing variation at a FLOWERING LOCUS C homeolog is associated with flowering time variation in the tetraploid Capsella bursa-pastoris
-
Slotte T., Huang H.R., Holm K., Ceplitis A., Onge K.S., Chen J., Lagercrantz U., Lascoux M. Splicing variation at a FLOWERING LOCUS C homeolog is associated with flowering time variation in the tetraploid Capsella bursa-pastoris. Genetics 2009, 183:337-345.
-
(2009)
Genetics
, vol.183
, pp. 337-345
-
-
Slotte, T.1
Huang, H.R.2
Holm, K.3
Ceplitis, A.4
Onge, K.S.5
Chen, J.6
Lagercrantz, U.7
Lascoux, M.8
-
61
-
-
84867151417
-
Independent FLC mutations as causes of flowering-time variation in Arabidopsis thaliana and Capsella rubella
-
Guo Y.L., Todesco M., Hagmann J., Das S., Weigel D. Independent FLC mutations as causes of flowering-time variation in Arabidopsis thaliana and Capsella rubella. Genetics 2012, 192:729-739.
-
(2012)
Genetics
, vol.192
, pp. 729-739
-
-
Guo, Y.L.1
Todesco, M.2
Hagmann, J.3
Das, S.4
Weigel, D.5
-
62
-
-
84865308916
-
A naturally occurring InDel variation in BraA.FLC.b (BrFLC2) associated with flowering time variation in Brassica rapa
-
Wu J., Wei K., Cheng F., Li S., Wang Q., Zhao J., Bonnema G., Wang X. A naturally occurring InDel variation in BraA.FLC.b (BrFLC2) associated with flowering time variation in Brassica rapa. BMC Plant Biol 2012, 12:151.
-
(2012)
BMC Plant Biol
, vol.12
, pp. 151
-
-
Wu, J.1
Wei, K.2
Cheng, F.3
Li, S.4
Wang, Q.5
Zhao, J.6
Bonnema, G.7
Wang, X.8
-
63
-
-
84870907625
-
A tourist-like MITE insertion in the upstream region of the BnFLC.A10 gene is associated with vernalization requirement in rapeseed (Brassica napus L.)
-
Hou J., Long Y., Raman H., Zou X., Wang J., Dai S., Xiao Q., Li C., Fan L., Liu B., et al. A tourist-like MITE insertion in the upstream region of the BnFLC.A10 gene is associated with vernalization requirement in rapeseed (Brassica napus L.). BMC Plant Biol 2012, 12:238.
-
(2012)
BMC Plant Biol
, vol.12
, pp. 238
-
-
Hou, J.1
Long, Y.2
Raman, H.3
Zou, X.4
Wang, J.5
Dai, S.6
Xiao, Q.7
Li, C.8
Fan, L.9
Liu, B.10
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