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Volumn 110, Issue 39, 2013, Pages 15818-15823

Arabidopsis semidwarfs evolved from independent mutations in GA20ox1, ortholog to green revolution dwarf alleles in rice and barley

Author keywords

Arabidopsis natural variation; Dwarf accessions; Gibberellin mutants

Indexed keywords

GIBBERELLIN; GIBBERELLIN 20 OXIDASE 1; UNCLASSIFIED DRUG;

EID: 84884613744     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1314979110     Document Type: Article
Times cited : (69)

References (38)
  • 1
    • 84860817547 scopus 로고    scopus 로고
    • Gibberellin biosynthesis and its regulation
    • Hedden P, Thomas SG (2012) Gibberellin biosynthesis and its regulation. Biochem J 444(1):11-25.
    • (2012) Biochem J , vol.444 , Issue.1 , pp. 11-25
    • Hedden, P.1    Thomas, S.G.2
  • 2
    • 44949108257 scopus 로고    scopus 로고
    • Gibberellin metabolism and its regulation
    • Yamaguchi S (2008) Gibberellin metabolism and its regulation. Annu Rev Plant Biol 59(1):225-251.
    • (2008) Annu Rev Plant Biol , vol.59 , Issue.1 , pp. 225-251
    • Yamaguchi, S.1
  • 3
    • 0037213890 scopus 로고    scopus 로고
    • The genes of the Green Revolution
    • Hedden P (2003) The genes of the Green Revolution. Trends Genet 19(1):5-9.
    • (2003) Trends Genet , vol.19 , Issue.1 , pp. 5-9
    • Hedden, P.1
  • 4
    • 0141754169 scopus 로고    scopus 로고
    • Plant biology. Hormones and the green revolution
    • Salamini F (2003) Plant biology. Hormones and the green revolution. Science 302(5642):71-72.
    • (2003) Science , vol.302 , Issue.5642 , pp. 71-72
    • Salamini, F.1
  • 5
    • 0037129230 scopus 로고    scopus 로고
    • Green revolution: A mutant gibberellin-synthesis gene in rice
    • Sasaki A, et al. (2002) Green revolution: A mutant gibberellin-synthesis gene in rice. Nature 416(6882):701-702.
    • (2002) Nature , vol.416 , Issue.6882 , pp. 701-702
    • Sasaki, A.1
  • 6
    • 0037173012 scopus 로고    scopus 로고
    • Semidwarf (sd-1), "green revolution" rice, contains a defective gibberellin 20-oxidase gene
    • Spielmeyer W, Ellis MH, Chandler PM (2002) Semidwarf (sd-1), "green revolution" rice, contains a defective gibberellin 20-oxidase gene. Proc Natl Acad Sci USA 99(13): 9043-9048.
    • (2002) Proc Natl Acad Sci USA , vol.99 , Issue.13 , pp. 9043-9048
    • Spielmeyer, W.1    Ellis, M.H.2    Chandler, P.M.3
  • 7
    • 63649109489 scopus 로고    scopus 로고
    • GA-20 oxidase as a candidate for the semidwarf gene sdw1/denso in barley
    • Jia Q, et al. (2009) GA-20 oxidase as a candidate for the semidwarf gene sdw1/denso in barley. Funct Integr Genomics 9(2):255-262.
    • (2009) Funct Integr Genomics , vol.9 , Issue.2 , pp. 255-262
    • Jia, Q.1
  • 8
    • 38849207842 scopus 로고    scopus 로고
    • The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis life cycle
    • Rieu I, et al. (2008) The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis life cycle. Plant J 53(3):488-504.
    • (2008) Plant J , vol.53 , Issue.3 , pp. 488-504
    • Rieu, I.1
  • 9
    • 84860138965 scopus 로고    scopus 로고
    • Analysis of the developmental roles of the Arabidopsis gibberellin 20-oxidases demonstrates that GA20ox1,-2, and-3 are the dominant paralogs
    • Plackett AR, et al. (2012) Analysis of the developmental roles of the Arabidopsis gibberellin 20-oxidases demonstrates that GA20ox1,-2, and-3 are the dominant paralogs. Plant Cell 24(3):941-960.
    • (2012) Plant Cell , vol.24 , Issue.3 , pp. 941-960
    • Plackett, A.R.1
  • 10
    • 0029046366 scopus 로고
    • The GA5 locus of Arabidopsis thaliana encodes a multifunctional gibberellin 20-oxidase: Molecular cloning and functional expression
    • Xu YL, et al. (1995) The GA5 locus of Arabidopsis thaliana encodes a multifunctional gibberellin 20-oxidase: Molecular cloning and functional expression. Proc Natl Acad Sci USA 92(14):6640-6644.
    • (1995) Proc Natl Acad Sci USA , vol.92 , Issue.14 , pp. 6640-6644
    • Xu, Y.L.1
  • 11
    • 84861481317 scopus 로고    scopus 로고
    • Natural variation in GA1 associates with floral morphology in Arabidopsis thaliana
    • Brock MT, Kover PX, Weinig C (2012) Natural variation in GA1 associates with floral morphology in Arabidopsis thaliana. New Phytol 195(1):58-70.
    • (2012) New Phytol , vol.195 , Issue.1 , pp. 58-70
    • Brock, M.T.1    Kover, P.X.2    Weinig, C.3
  • 12
    • 33645221857 scopus 로고    scopus 로고
    • New Arabidopsis recombinant inbred line populations genotyped using SNPWave and their use for mapping flowering-time quantitative trait loci
    • El-Lithy ME, et al. (2006) New Arabidopsis recombinant inbred line populations genotyped using SNPWave and their use for mapping flowering-time quantitative trait loci. Genetics 172(3):1867-1876.
    • (2006) Genetics , vol.172 , Issue.3 , pp. 1867-1876
    • El-Lithy, M.E.1
  • 13
    • 34250250759 scopus 로고
    • Induction and analysis of gibberellin sensitive mutants in Arabidopsis thaliana (L)Heynh
    • Koornneef M, van der Veen J (1980) Induction and analysis of gibberellin sensitive mutants in Arabidopsis thaliana (L.)Heynh. Theor Appl Genet 58(6):257-263.
    • (1980) Theor Appl Genet , vol.58 , Issue.6 , pp. 257-263
    • Koornneef, M.1    Van Der Veen, J.2
  • 14
    • 33644902712 scopus 로고    scopus 로고
    • Distinct and overlapping roles of two gibberellin 3-oxidases in Arabidopsis development
    • Mitchum MG, et al. (2006) Distinct and overlapping roles of two gibberellin 3-oxidases in Arabidopsis development. Plant J 45(5):804-818.
    • (2006) Plant J , vol.45 , Issue.5 , pp. 804-818
    • Mitchum, M.G.1
  • 15
    • 78650470891 scopus 로고    scopus 로고
    • Association mapping of local climate-sensitive quantitative trait loci in Arabidopsis thaliana
    • Li Y, Huang Y, Bergelson J, Nordborg M, Borevitz JO (2010) Association mapping of local climate-sensitive quantitative trait loci in Arabidopsis thaliana. Proc Natl Acad Sci USA 107(49):21199-21204.
    • (2010) Proc Natl Acad Sci USA , vol.107 , Issue.49 , pp. 21199-21204
    • Li, Y.1    Huang, Y.2    Bergelson, J.3    Nordborg, M.4    Borevitz, J.O.5
  • 16
    • 78649481127 scopus 로고    scopus 로고
    • Natural variation at Strubbelig Receptor Kinase 3 drives immune-triggered incompatibilities between Arabidopsis thaliana accessions
    • Alcázar R, et al. (2010) Natural variation at Strubbelig Receptor Kinase 3 drives immune-triggered incompatibilities between Arabidopsis thaliana accessions. Nat Genet 42(12):1135-1139.
    • (2010) Nat Genet , vol.42 , Issue.12 , pp. 1135-1139
    • Alcázar, R.1
  • 17
    • 82755171802 scopus 로고    scopus 로고
    • Altitudinal and climatic adaptation is mediated by flowering traits and FRI, FLC, and PHYC genes in Arabidopsis
    • Méndez-Vigo B, Picó FX, Ramiro M, Martínez-Zapater JM, Alonso-Blanco C (2011) Altitudinal and climatic adaptation is mediated by flowering traits and FRI, FLC, and PHYC genes in Arabidopsis. Plant Physiol 157(4):1942-1955.
    • (2011) Plant Physiol , vol.157 , Issue.4 , pp. 1942-1955
    • Méndez-Vigo, B.1    Picó, F.X.2    Ramiro, M.3    Martínez-Zapater, J.M.4    Alonso-Blanco, C.5
  • 18
    • 0036151286 scopus 로고    scopus 로고
    • Structure and mechanism of anthocyanidin synthase from Arabidopsis thaliana
    • Wilmouth RC, et al. (2002) Structure and mechanism of anthocyanidin synthase from Arabidopsis thaliana. Structure 10(1):93-103.
    • (2002) Structure , vol.10 , Issue.1 , pp. 93-103
    • Wilmouth, R.C.1
  • 19
    • 78149424420 scopus 로고    scopus 로고
    • Extremely low genetic variability and highly structured local populations of Arabidopsis thaliana at higher latitudes
    • Lewandowska-Sabat AM, Fjellheim S, Rognli OA (2010) Extremely low genetic variability and highly structured local populations of Arabidopsis thaliana at higher latitudes. Mol Ecol 19(21):4753-4764.
    • (2010) Mol Ecol , vol.19 , Issue.21 , pp. 4753-4764
    • Lewandowska-Sabat, A.M.1    Fjellheim, S.2    Rognli, O.A.3
  • 20
    • 77649215261 scopus 로고    scopus 로고
    • The scale of population structure in Arabidopsis thaliana
    • Platt A, et al. (2010) The scale of population structure in Arabidopsis thaliana. PLoS Genet 6(2):e1000843.
    • (2010) PLoS Genet , vol.6 , Issue.2
    • Platt, A.1
  • 21
    • 80053384429 scopus 로고    scopus 로고
    • Whole-genome sequencing of multiple Arabidopsis thaliana populations
    • Cao J, et al. (2011) Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nat Genet 43(10):956-963.
    • (2011) Nat Genet , vol.43 , Issue.10 , pp. 956-963
    • Cao, J.1
  • 22
    • 17444402038 scopus 로고    scopus 로고
    • A multilocus sequence survey in Arabidopsis thaliana reveals a genome-wide departure from a neutral model of DNA sequence polymorphism
    • Schmid KJ, Ramos-Onsins S, Ringys-Beckstein H, Weisshaar B, Mitchell-Olds T (2005) A multilocus sequence survey in Arabidopsis thaliana reveals a genome-wide departure from a neutral model of DNA sequence polymorphism. Genetics 169(3):1601-1615.
    • (2005) Genetics , vol.169 , Issue.3 , pp. 1601-1615
    • Schmid, K.J.1    Ramos-Onsins, S.2    Ringys-Beckstein, H.3    Weisshaar, B.4    Mitchell-Olds, T.5
  • 23
    • 69949149117 scopus 로고    scopus 로고
    • Evolutionary rate patterns of the Gibberellin pathway genes
    • Yang YH, Zhang FM, Ge S (2009) Evolutionary rate patterns of the Gibberellin pathway genes. BMC Evol Biol 9:206.
    • (2009) BMC Evol Biol , vol.9 , pp. 206
    • Yang, Y.H.1    Zhang, F.M.2    Ge, S.3
  • 24
    • 33644833484 scopus 로고    scopus 로고
    • Genetic and molecular analyses of natural variation indicate CBF2 as a candidate gene for underlying a freezing tolerance quantitative trait locus in Arabidopsis
    • Alonso-Blanco C, et al. (2005) Genetic and molecular analyses of natural variation indicate CBF2 as a candidate gene for underlying a freezing tolerance quantitative trait locus in Arabidopsis. Plant Physiol 139(3):1304-1312.
    • (2005) Plant Physiol , vol.139 , Issue.3 , pp. 1304-1312
    • Alonso-Blanco, C.1
  • 25
    • 84876818452 scopus 로고    scopus 로고
    • The Loci of repeated evolution: A catalog of genetic hotspots of phenotypic variation
    • Martin A, Orgogozo V (2013) The Loci of repeated evolution: A catalog of genetic hotspots of phenotypic variation. Evolution 67(5):1235-1250.
    • (2013) Evolution , vol.67 , Issue.5 , pp. 1235-1250
    • Martin, A.1    Orgogozo, V.2
  • 26
    • 58149359446 scopus 로고    scopus 로고
    • Natural genetic variation of Arabidopsis thaliana is geographically structured in the Iberian peninsula
    • Picó FX, Méndez-Vigo B, Martínez-Zapater JM, Alonso-Blanco C (2008) Natural genetic variation of Arabidopsis thaliana is geographically structured in the Iberian peninsula. Genetics 180(2):1009-1021.
    • (2008) Genetics , vol.180 , Issue.2 , pp. 1009-1021
    • Picó, F.X.1    Méndez-Vigo, B.2    Martínez-Zapater, J.M.3    Alonso-Blanco, C.4
  • 27
    • 79959312164 scopus 로고    scopus 로고
    • Expression level of a gibberellin 20-oxidase gene is associated with multiple agronomic and quality traits in barley
    • Jia Q, et al. (2011) Expression level of a gibberellin 20-oxidase gene is associated with multiple agronomic and quality traits in barley. Theor Appl Genet 122(8):1451-1460.
    • (2011) Theor Appl Genet , vol.122 , Issue.8 , pp. 1451-1460
    • Jia, Q.1
  • 28
    • 1942512201 scopus 로고    scopus 로고
    • A rice semi-dwarf gene, Tan-Ginbozu (D35), encodes the gibberellin biosynthesis enzyme, ent-kaurene oxidase
    • Itoh H, et al. (2004) A rice semi-dwarf gene, Tan-Ginbozu (D35), encodes the gibberellin biosynthesis enzyme, ent-kaurene oxidase. Plant Mol Biol 54(4):533-547.
    • (2004) Plant Mol Biol , vol.54 , Issue.4 , pp. 533-547
    • Itoh, H.1
  • 30
    • 78650481611 scopus 로고    scopus 로고
    • Adaptation and extinction in experimentally fragmented landscapes
    • Fakheran S, et al. (2010) Adaptation and extinction in experimentally fragmented landscapes. Proc Natl Acad Sci USA 107(44):19120-19125.
    • (2010) Proc Natl Acad Sci USA , vol.107 , Issue.44 , pp. 19120-19125
    • Fakheran, S.1
  • 31
    • 34250519890 scopus 로고
    • EMS-induced genic male sterility in Arabidopsis thaliana: A model selection experiment
    • van der Veen JH, Wirtz P (1968) EMS-induced genic male sterility in Arabidopsis thaliana: A model selection experiment. Euphytica 17(3):371-377.
    • (1968) Euphytica , vol.17 , Issue.3 , pp. 371-377
    • Van Der Veen, J.H.1    Wirtz, P.2
  • 32
    • 77950301214 scopus 로고    scopus 로고
    • Variance component model to account for sample structure in genome-wide association studies
    • Kang HM, et al. (2010) Variance component model to account for sample structure in genome-wide association studies. Nat Genet 42(4):348-354.
    • (2010) Nat Genet , vol.42 , Issue.4 , pp. 348-354
    • Kang, H.M.1
  • 33
    • 85090878417 scopus 로고    scopus 로고
    • LDheatmap: An R function for graphical display of pairwise linkage disequilibria between single nucleotide polymorphisms
    • Code Snippet 3
    • Shin J-H, Blay S, McNeney B, Graham J (2006) LDheatmap: An R function for graphical display of pairwise linkage disequilibria between single nucleotide polymorphisms. J Stat Software 16:Code Snippet 3.
    • (2006) J Stat Software , vol.16
    • Shin, J.-H.1    Blay, S.2    McNeney, B.3    Graham, J.4
  • 34
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155(2):945-959.
    • (2000) Genetics , vol.155 , Issue.2 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 35
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study. Mol Ecol 14(8):2611-2620.
    • (2005) Mol Ecol , vol.14 , Issue.8 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 36
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
    • Librado P, Rozas J (2009) DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25(11):1451-1452.
    • (2009) Bioinformatics , vol.25 , Issue.11 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2
  • 37
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positionspecific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positionspecific gap penalties and weight matrix choice. Nucleic Acids Res 22(22):4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 38
    • 0033771358 scopus 로고    scopus 로고
    • TCS: A computer program to estimate gene genealogies
    • Clement M, Posada D, Crandall KA (2000) TCS: A computer program to estimate gene genealogies. Mol Ecol 9(10):1657-1659.
    • (2000) Mol Ecol , vol.9 , Issue.10 , pp. 1657-1659
    • Clement, M.1    Posada, D.2    Crandall, K.A.3


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