Mapping of ionomic traits in Mimulus guttatus reveals Mo and Cd QTLs that colocalize with MOT1 homologues

PLoS ONE

Volumn 7, Issue 1, 2012, Pages

  Lowry, David B ^a,b   Sheng, Calvin C ^b   Zhu, Zhirui ^b   Juenger, Thomas E ^c   Lahner, Brett ^d   Salt, David E ^d,e   Willis, John H ^a,b  

^a DUKE UNIVERSITY MEDICAL CENTER   (United States)

^b DUKE UNIVERSITY   (United States)

^c UNIVERSITY OF TEXAS AT AUSTIN   (United States)

^d PURDUE UNIVERSITY   (United States)

^e UNIVERSITY OF ABERDEEN   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CADMIUM; MOLYBDENUM; ANION TRANSPORT PROTEIN; ARABIDOPSIS PROTEIN; ION; METAL; MOT1 PROTEIN, ARABIDOPSIS;

ARTICLE; CONTROLLED STUDY; GENE FUNCTION; GENE LOCATION; GENETIC VARIABILITY; MIMULUS; MIMULUS GUTTATUS; MOT1 GENE; NONHUMAN; PLANT GENE; QUANTITATIVE TRAIT LOCUS MAPPING; RECOMBINANT INBRED STRAIN; SEQUENCE HOMOLOGY; CHEMISTRY; CHROMOSOME MAP; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT GENOME; PLANT LEAF; QUANTITATIVE TRAIT LOCUS;

MIMULUS GUTTATUS;

ANION TRANSPORT PROTEINS; ARABIDOPSIS PROTEINS; BASE SEQUENCE; CADMIUM; CHROMOSOME MAPPING; GENES, PLANT; GENOME, PLANT; IONS; METALS; MIMULUS; MOLECULAR SEQUENCE DATA; MOLYBDENUM; PHYLOGENY; PLANT LEAVES; QUANTITATIVE TRAIT LOCI; SEQUENCE HOMOLOGY;

EID: 84856179570     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0030730     Document Type: Article

References (47)

1. Prinzenberg AE, Barbier H, Salt DE, Stich B, Reymond M, (2010) Relationships between Growth, Growth Response to Nutrient Supply, and Ion Content Using a Recombinant Inbred Line Population in Arabidopsis. Plant Physiology 154: 1361-1371.
2. Baxter I, Muthukumar B, Park HC, Buchner P, Lahner B, et al. (2008) Variation in molybdenum content across broadly distributed populations of Arabidopsis thaliana is controlled by a mitochondrial molybdenum transporter (MOT1). PLoS Genetics 4: e1000004.
3. Buescher E, Achberger T, Amusan I, Giannini A, Ochsenfeld C, et al. (2010) Natural genetic variation in selected populations of Arabidopsis thaliana is associated with ionomic differences. PLoS One 5: e11081.
4. Baxter I, (2009) Ionomics: studying the social network of mineral nutrients. Current Opinion in Plant Biology 12: 381-386.
5. Tian H, Baxter IR, Lahner B, Reinders A, Salt DE, et al. (2010) Arabidopsis NPCC6/NaKR1 is a phloem mobile metal binding protein necessary for phloem function and root meristem maintenance. Plant Cell 22: 3963-3979.
6. Chao DY, Gable K, Chen M, Baxter I, Dietrich CR, et al. (2011) Sphingolipids in the root play an important role in regulating the leaf ionome in Arabidopsis thaliana. Plant Cell 23: 1061-1081.
7. Antonovics, Bradshaw AD, (1970) Evolution in closely adjacent plant populations. VIII. Clinal patterns at a mine boundary. Heredity 25: 349-34.
8. Baxter I, Brazelton JN, Yu DN, Huang YS, Lahner B, et al. (2010) A coastal cline in Sodium accumulation in Arabidopsis thaliana is driven by natural variation of the sodium transporter AtHKT1;1. PLoS Genetics 6: e1001193.
9. Harrison S, Rajakaruna N, (2011) Serpentine: The evolution and ecology of a model system Berkeley, CA University of California Press.
10. Macnair MR, Christie P, (1983) Reproductive isolation as a pleitropic effect of copper tolerance in Mimulus guttatus? Heredity 50: 295-302.
11. Gardner M, Macnair M, (2000) Factors affecting the co-existence of the serpentine endemic Mimulus nudatus Curran and its presumed progenitor, Mimulus guttatus Fischer ex DC. Biological Journal of the Linnean Society 69: 443-459.
12. Kay KM, Ward KL, Watt LR, Schemske DW, (2011) Plant Speciation. In: Harrison S, Rajakaruna N, editors. Serpentine: The evolution and ecology of a model system Berkeley, CA University of California Press pp. 71-95.
13. Rus A, Baxter I, Muthukumar B, Gustin J, Lahner B, et al. (2006) Natural variants of AtHKT1 enhance Na+ accumulation in two wild populations of Arabidopsis. PLoS Genetics 2: 1964-1973.
14. Loudet O, Saliba-Colombani V, Camilleri C, Calenge F, Gaudon V, et al. (2007) Natural variation for sulfate content in Arabidopsis thaliana is highly controlled by APR2. Nature Genetics 39: 896-900.
15. Morrissey J, Baxter IR, Lee J, Li LT, Lahner B, et al. (2009) The ferroportin metal efflux proteins function in iron and cobalt homeostasis in Arabidopsis. Plant Cell 21: 3326-3338.
16. Kobayashi Y, Kuroda K, Kimura K, Southron-Francis JL, Furuzawa A, et al. (2008) Amino acid polymorphisms in strictly conserved domains of a P-type ATPase HMA5 are involved in the mechanism of copper tolerance variation in Arabidopsis. Plant Physiology 148: 969-980.
17. Lobell DB, Burke MB, Tebaldi C, Mastrandrea MD, Falcon WP, et al. (2008) Prioritizing climate change adaptation needs for food security in 2030. Science 319: 607-610.
18. Ingram JSI, Gregory PJ, Izac AM, (2008) The role of agronomic research in climate change and food security policy. Agriculture, Ecosystem & Environment 126: 4-12.
19. Hall MC, Basten CJ, Willis JH, (2006) Pleiotropic quantitative trait loci contribute to population divergence in traits associated with life-history variation in Mimulus guttatus. Genetics 172: 1829-1844.
20. Hall MC, Lowry DB, Willis JH, (2010) Is local adaptation in Mimulus guttatus caused by trade-offs at individual loci? Molecular Ecology 19: 2739-2753.
21. Lowry DB, Rockwood RC, Willis JH, (2008) Ecological reproductive isolation of coast and inland races of Mimulus guttatus. Evolution 62: 2196-2214.
22. Lowry DB, (2010) Landscape evolutionary genomics. Biology Letter 6: 502-504.
23. Lowry DB, Hall MC, Salt DE, Willis JH, (2009) Genetic and physiological basis of adaptive salt tolerance divergence between coastal and inland Mimulus guttatus. New Phytologist 183: 776-788.
24. Hall MC, Willis JH, (2006) Divergent selection on flowering time contributes to local adaptation in Mimulus guttatus populations. Evolution 60: 2466-2477.
25. Baxter I, Ouzzani M, Orcun S, Kennedy B, Jandhyala SS, et al. (2007) Purdue Ionomics Information Management System. An integrated functional genomics platform. Plant Physiology 143: 600-611.
26. Broman KW, Wu H, Sen S, Churchill GA, (2003) R/qtl: QTL mapping in experimental crosses. Bioinformatics 19: 889-890.
27. Kaiser BN, Gridley KL, Brady JN, Phillips T, Tyerman SD, (2005) The role of molybdenum in agricultural plant production. Annals of Botany 96: 745-754.
28. Tomatsu H, Takano J, Takahashi H, Watanabe-Takahashi A, Shibagaki N, et al. (2007) An Arabidopsis thaliana high-affinity molybdate transporter required for efficient uptake of molybdate from soil. Proceedings of the National Academy of Sciences U S A 104: 18807-18812.
29. Fitzpatrick KL, Tyerman SD, Kaiser BN, (2008) Molybdate transport through the plant sulfate transporter SHST1. FEBS Letters 582: 1508-1513.
30. Ide Y, Kusano M, Oikawa A, Fukushima A, Tomatsu H, et al. (2011) Effects of molybdenum deficiency and defects in molybdate transporter MOT1 on transcript accumulation and nitrogen/sulphur metabolism in Arabidopsis thaliana. Journal of Experimental Botany 62: 1483-1497.
31. Mendel RR, Schwarz G, (2011) Molybdenum cofactor biosynthesis in plants and humans. Coordination Chemistry Reviews 255: 1145-1158.
32. Tejada-Jimenez M, Llamas A, Sanz-Luque E, Galvan A, Fernandez E, (2007) A high-affinity molybdate transporter in eukaryotes. Proceedings of the National Academy of Sciences U S A 104: 20126-20130.
33. Tejada-Jimenez M, Galvan A, Fernandez E, (2011) Algae and humans share a molybdate transporter. Proceedings of the National Academy of Sciences U S A 108: 6420-6425.
34. Gasber A, Klaumann S, Trentmann O, Trampczynsk A, Clemens, et al. (2011) Identification of an Arabidopsis solute carrier critical for intracellular transport and inter-organ allocation of molybdate. Plant Biology 13: 710-718.
35. Wu CA, Lowry DB, Nutter LI, Willis JH, (2010) Natural variation for drought-response traits in the Mimulus guttatus species complex. Oecologia 162: 23-33.
36. Lowry DB, Willis JH, (2010) A widespread chromosomal inversion polymorphism contributes to a major life-history transition, local adaptation, and reproductive isolation. PLoS Biology 8: e1000500.
37. Bittner F, Mendel RR, (2010) Cell biology of molybdenum. Plant Cell Monographs 17: 119-143.
38. Schwarz G, Mendel RR, Ribbe MW, (2009) Molybdenum cofactors, enzymes and pathways. Nature 460: 839-847.
39. Hewitt EJ, (1956) Symptoms of molybdenum deficiency in plants. Soil Science 81: 159-172.
40. Gupta UC, (1997) Molybdenum in agriculture Cambridge, UK Cambridge University Press.
41. di Toppi LS, Gabbrielli R, (1999) Response to cadmium in higher plants. Environmental and Experimental Botany 41: 105-130.
42. Jiang RF, Ma DY, Zhao FJ, McGrath SP, (2005) Cadmium hyperaccumulation protects Thlaspi caerulescens from leaf feeding damage by thrips (Frankliniella occidentalis). New Phytologist 167: 805-813.
43. Poschenrieder C, Tolra R, Barcelo J, (2006) Can metals defend plants against biotic stress? Trends in Plant Science 11: 288-295.
44. Verbruggen N, Hermans C, Schat H, (2009) Molecular mechanisms of metal hyperaccumulation in plants. New Phytologist 181: 759-776.
45. Verbruggen N, Hermans C, Schat H, (2009) Mechanisms to cope with arsenic or cadmium excess in plants. Current Opinion in Plant Biology 12: 364-372.
46. Vert G, Grotz N, Dedaldechamp F, Gaymard F, Guerinot ML, et al. (2002) IRT1, an Arabidopsis transporter essential for iron uptake from the soil and for plant growth. Plant Cell 14: 1223-1233.
47. Bernard DG, Cheng YF, Zhao YD, Balk J, (2009) An Allelic Mutant Series of ATM3 Reveals Its Key Role in the Biogenesis of Cytosolic Iron-Sulfur Proteins in Arabidopsis. Plant Physiology 151: 590-602.