-
1
-
-
84856739946
-
Hypoxia-inducible factors in physiology and medicine
-
Semenza GL (2012) Hypoxia-inducible factors in physiology and medicine. Cell 148: 399-408
-
(2012)
Cell
, vol.148
, pp. 399-408
-
-
Semenza, G.L.1
-
2
-
-
43649093915
-
Oxygen sensing by metazoans: The central role of the hif hydroxylase pathway
-
Kaelin WG Jr, Ratcliffe PJ (2008) Oxygen sensing by metazoans: the central role of the HIF hydroxylase pathway. Mol Cell 30: 393-402
-
(2008)
Mol Cell
, vol.30
, pp. 393-402
-
-
Kaelin Jr., W.G.1
Ratcliffe, P.J.2
-
3
-
-
77952300971
-
Genomewide identification of hypoxia-inducible factor binding sites and target genes by a probabilistic model integrating transcription-profiling data and in silico binding site prediction
-
Ortiz-Barahona A, Villar D, Pescador N, Amigo J, del Peso L (2010) Genomewide identification of hypoxia-inducible factor binding sites and target genes by a probabilistic model integrating transcription-profiling data and in silico binding site prediction. Nucleic Acids Res 38: 2332-2345
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 2332-2345
-
-
Ortiz-Barahona, A.1
Villar, D.2
Pescador, N.3
Amigo, J.4
Del Peso, L.5
-
5
-
-
81355142141
-
Non-coding rnas in human disease
-
Esteller M (2011) Non-coding RNAs in human disease. Nat Rev Genet 12: 861-874
-
(2011)
Nat Rev Genet
, vol.12
, pp. 861-874
-
-
Esteller, M.1
-
6
-
-
82155186923
-
The emergence of lncrnas in cancer biology
-
Prensner JR, Chinnaiyan AM (2011) The emergence of lncRNAs in cancer biology. Cancer Discov 1: 391-407
-
(2011)
Cancer Discov
, vol.1
, pp. 391-407
-
-
Prensner, J.R.1
Chinnaiyan, A.M.2
-
7
-
-
79951551684
-
Genomewide characterization of non-polyadenylated rnas
-
Yang L, Duff MO, Graveley BR, Carmichael GG, Chen LL (2011) Genomewide characterization of non-polyadenylated RNAs. Genome Biol 12: R16
-
(2011)
Genome Biol
, vol.12
-
-
Yang, L.1
Duff, M.O.2
Graveley, B.R.3
Carmichael, G.G.4
Chen, L.L.5
-
8
-
-
84863389964
-
Synthetic transactivation screening reveals etv4 as broad coactivator of hypoxiainducible factor signaling
-
Wollenick K, Hu J, Kristiansen G, Schraml P, Rehrauer H, Berchner-Pfannschmidt U, Fandrey J, Wenger RH, Stiehl DP (2012) Synthetic transactivation screening reveals ETV4 as broad coactivator of hypoxiainducible factor signaling. Nucleic Acids Res 40: 1928-1943
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 1928-1943
-
-
Wollenick, K.1
Hu, J.2
Kristiansen, G.3
Schraml, P.4
Rehrauer, H.5
Berchner-Pfannschmidt, U.6
Fandrey, J.7
Wenger, R.H.8
Stiehl, D.P.9
-
9
-
-
62549117314
-
An architectural role for a nuclear noncoding rna: Neat1 rna is essential for the structure of paraspeckles
-
Clemson CM, Hutchinson JN, Sara SA, Ensminger AW, Fox AH, Chess A, Lawrence JB (2009) An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles. Mol Cell 33: 717-726
-
(2009)
Mol Cell
, vol.33
, pp. 717-726
-
-
Clemson, C.M.1
Hutchinson, J.N.2
Sara, S.A.3
Ensminger, A.W.4
Fox, A.H.5
Chess, A.6
Lawrence, J.B.7
-
10
-
-
81755161347
-
The long noncoding malat-1 rna indicates a poor prognosis in non-small cell lung cancer and induces migration and tumor growth
-
Schmidt LH, Spieker T, Koschmieder S, Schaffers S, Humberg J, Jungen D, Bulk E, Hascher A, Wittmer D, Marra A, Hillejan L, wiebe K, Berdel WE, Wiewrodt R, Muller-Tidow C (2011) The long noncoding MALAT-1 RNA indicates a poor prognosis in non-small cell lung cancer and induces migration and tumor growth. J Thorac Oncol 6: 1984-1992
-
(2011)
J Thorac Oncol
, vol.6
, pp. 1984-1992
-
-
Schmidt, L.H.1
Spieker, T.2
Koschmieder, S.3
Schaffers, S.4
Humberg, J.5
Jungen, D.6
Bulk, E.7
Hascher, A.8
Wittmer, D.9
Marra, A.10
Hillejan, L.11
Wiebe, K.12
Berdel, W.E.13
Wiewrodt, R.14
Muller-Tidow, C.15
-
11
-
-
77950370221
-
The oncofetal h19 rna connection: Hypoxia, p53 and cancer
-
Matouk IJ, Mezan S, Mizrahi A, Ohana P, Abu-Lail R, Fellig Y, Degroot N, Galun E, Hochberg A (2010) The oncofetal H19 RNA connection: hypoxia, p53 and cancer. Biochim Biophys Acta 1803: 443-451
-
(2010)
Biochim Biophys Acta
, vol.1803
, pp. 443-451
-
-
Matouk, I.J.1
Mezan, S.2
Mizrahi, A.3
Ohana, P.4
Abu-Lail, R.5
Fellig, Y.6
Degroot, N.7
Galun, E.8
Hochberg, A.9
-
12
-
-
34547582418
-
Cpc: Assess the protein-coding potential of transcripts using sequence features and support vector machine
-
Kong L, Zhang Y, Ye ZQ, Liu XQ, Zhao SQ, Wei L, Gao G (2007) CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine. Nucleic Acids Res 35: W345-349
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Kong, L.1
Zhang, Y.2
Ye, Z.Q.3
Liu, X.Q.4
Zhao, S.Q.5
Wei, L.6
Gao, G.7
-
13
-
-
79959359296
-
Long antisense non-coding rnas function to direct epigenetic complexes that regulate transcription in human cells
-
Morris KV (2009) Long antisense non-coding RNAs function to direct epigenetic complexes that regulate transcription in human cells. Epigenetics 4: 296-301
-
(2009)
Epigenetics
, vol.4
, pp. 296-301
-
-
Morris, K.V.1
-
14
-
-
79959450883
-
High-resolution genome-wide mapping of hif-binding sites by chip-seq
-
Schodel J, Oikonomopoulos S, Ragoussis J, Pugh CW, Ratcliffe PJ, Mole DR (2011) High-resolution genome-wide mapping of HIF-binding sites by ChIP-seq. Blood 117: e207-217
-
(2011)
Blood
, vol.117
-
-
Schodel, J.1
Oikonomopoulos, S.2
Ragoussis, J.3
Pugh, C.W.4
Ratcliffe, P.J.5
Mole, D.R.6
-
15
-
-
27344435774
-
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
-
Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, Gillette MA, Paulovich A, Pomeroy SL, Golub TR, Lander ES, Mesirov JP (2005) Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 102: 15545-15550
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
Mukherjee, S.4
Ebert, B.L.5
Gillette, M.A.6
Paulovich, A.7
Pomeroy, S.L.8
Golub, T.R.9
Lander, E.S.10
Mesirov, J.P.11
-
16
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, Wei G, Chepelev I, Zhao K (2007) High-resolution profiling of histone methylations in the human genome. Cell 129: 823-837
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.Y.4
Schones, D.E.5
Wang, Z.6
Wei, G.7
Chepelev, I.8
Zhao, K.9
-
17
-
-
84865790047
-
An integrated encyclopedia of dna elements in the human genome
-
Dunham I, Kundaje A, Aldred SF, Collins PJ, Davis CA, Doyle F, Epstein CB, Frietze S, Harrow J, Kaul R, Khatun J, Lajoie BR, Landt SG, Lee BK, Pauli F, Rosenbloom KR, Sabo P, Safi A, Sanyal A, Shoresh N, et al (2012) An integrated encyclopedia of DNA elements in the human genome. Nature 489: 57-74
-
(2012)
Nature
, vol.489
, pp. 57-74
-
-
Dunham, I.1
Kundaje, A.2
Aldred, S.F.3
Collins, P.J.4
Davis, C.A.5
Doyle, F.6
Epstein, C.B.7
Frietze, S.8
Harrow, J.9
Kaul, R.10
Khatun, J.11
Lajoie, B.R.12
Landt, S.G.13
Lee, B.K.14
Pauli, F.15
Rosenbloom, K.R.16
Sabo, P.17
Safi, A.18
Sanyal, A.19
Shoresh, N.20
more..
-
18
-
-
0344022572
-
Targeted recruitment of set1 histone methylase by elongating pol ii provides a localized mark and memory of recent transcriptional activity
-
Ng HH, Robert F, Young RA, Struhl K (2003) Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity. Mol Cell 11: 709-719
-
(2003)
Mol Cell
, vol.11
, pp. 709-719
-
-
Ng, H.H.1
Robert, F.2
Young, R.A.3
Struhl, K.4
-
19
-
-
84880534096
-
Set1 and p300 act synergistically through coupled histone modifications, in transcriptional activation by p53
-
Tang Z, Chen WY, Shimada M, Nguyen UT, Kim J, Sun XJ, Sengoku T, McGinty RK, Fernandez JP, Muir TW, Roeder RG (2013) SET1 and p300 Act Synergistically, through Coupled Histone Modifications, in Transcriptional Activation by p53. Cell 154: 297-310
-
(2013)
Cell
, vol.154
, pp. 297-310
-
-
Tang, Z.1
Chen, W.Y.2
Shimada, M.3
Nguyen, U.T.4
Kim, J.5
Sun, X.J.6
Sengoku, T.7
McGinty, R.K.8
Fernandez, J.P.9
Muir, T.W.10
Roeder, R.G.11
-
20
-
-
84871699564
-
Promoter-proximal pausing of rna polymerase ii: Emerging roles in metazoans
-
Adelman K, Lis JT (2012) Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans. Nat Rev Genet 13: 720-731
-
(2012)
Nat Rev Genet
, vol.13
, pp. 720-731
-
-
Adelman, K.1
Lis, J.T.2
-
21
-
-
84867637646
-
Surveying the epigenomic landscape, one base at a time
-
Zentner GE, Henikoff S (2012) Surveying the epigenomic landscape, one base at a time. Genome Biol 13: 250
-
(2012)
Genome Biol
, vol.13
, pp. 250
-
-
Zentner, G.E.1
Henikoff, S.2
-
22
-
-
33744954065
-
Concordant regulation of gene expression by hypoxia and 2-oxoglutarate-dependent dioxygenase inhibition: The role of hif-1alpha, hif-2alpha, and other pathways
-
Elvidge GP, Glenny L, Appelhoff RJ, Ratcliffe PJ, Ragoussis J, Gleadle JM (2006) Concordant regulation of gene expression by hypoxia and 2-oxoglutarate-dependent dioxygenase inhibition: the role of HIF-1alpha, HIF-2alpha, and other pathways. J Biol Chem 281: 15215-15226
-
(2006)
J Biol Chem
, vol.281
, pp. 15215-15226
-
-
Elvidge, G.P.1
Glenny, L.2
Appelhoff, R.J.3
Ratcliffe, P.J.4
Ragoussis, J.5
Gleadle, J.M.6
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