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Volumn 8, Issue 12, 2013, Pages

Erratum: Expression of Concern: Development and Validation of a Microarray for the Investigation of the CAZymes Encoded by the Human Gut Microbiome (PLoS ONE (2013) 8:12 (e84033) DOI: 10.1371/journal.pone.0084033);Development and validation of a microarray for the investigation of the CAZymes encoded by the human gut microbiome

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL ENZYME; CARBOHYDRATE ACTIVE ENZYME; CELLULASE; GLYCOSIDASE; POLYSACCHARIDE LYASE; UNCLASSIFIED DRUG;

EID: 84894212606     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0278017     Document Type: Erratum
Times cited : (41)

References (43)
  • 2
    • 37749031255 scopus 로고    scopus 로고
    • Next-generation sequencing transforms today's biology
    • Schuster SC (2008) Next-generation sequencing transforms today's biology. Nat Methods 5: 16-18.
    • (2008) Nat Methods , vol.5 , pp. 16-18
    • Schuster, S.C.1
  • 3
    • 34249723655 scopus 로고    scopus 로고
    • Advanced sequencing technologies and their wider impact in microbiology
    • Hall N (2007) Advanced sequencing technologies and their wider impact in microbiology. J Exp Biol 210: 1518-1525.
    • (2007) J Exp Biol , vol.210 , pp. 1518-1525
    • Hall, N.1
  • 4
    • 77952158672 scopus 로고    scopus 로고
    • Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
    • Turnbaugh PJ, Quince C, Faith JJ, McHardy AC, Yatsunenko T, et al. (2010) Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. Proc Natl Acad Sci U S A 107: 7503-7508.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 7503-7508
    • Turnbaugh, P.J.1    Quince, C.2    Faith, J.J.3    McHardy, A.C.4    Yatsunenko, T.5
  • 6
    • 34547683600 scopus 로고    scopus 로고
    • Diversity of the human gastrointestinal tract microbiota revisited
    • DOI 10.1111/j.1462-2920.2007.01369.x
    • Rajilic-Stojanovic M, Smidt H, de Vos WM (2007) Diversity of the human gastrointestinal tract microbiota revisited. Environ Microbiol 9: 2125-2136. (Pubitemid 47222128)
    • (2007) Environmental Microbiology , vol.9 , Issue.9 , pp. 2125-2136
    • Rajilic-Stojanovic, M.1    Smidt, H.2    De Vos, W.M.3
  • 7
    • 31144459030 scopus 로고    scopus 로고
    • RNA viral community in human feces: Prevalence of plant pathogenic viruses
    • Zhang T, Breitbart M, Lee WH, Run JQ, Wei CL, et al. (2006) RNA viral community in human feces: prevalence of plant pathogenic viruses. PLoS Biol 4: e3.
    • (2006) PLoS Biol , vol.4
    • Zhang, T.1    Breitbart, M.2    Lee, W.H.3    Run, J.Q.4    Wei, C.L.5
  • 10
    • 33845874101 scopus 로고    scopus 로고
    • An obesity-associated gut microbiome with increased capacity for energy harvest
    • DOI 10.1038/nature05414, PII NATURE05414
    • Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, et al. (2006) An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444: 1027-1031. (Pubitemid 46018515)
    • (2006) Nature , vol.444 , Issue.7122 , pp. 1027-1031
    • Turnbaugh, P.J.1    Ley, R.E.2    Mahowald, M.A.3    Magrini, V.4    Mardis, E.R.5    Gordon, J.I.6
  • 11
    • 77956310020 scopus 로고    scopus 로고
    • Effects of gut microbiota on obesity and atherosclerosis via modulation of inflammation and lipid metabolism
    • Caesar R, Fak F, Backhed F (2010) Effects of gut microbiota on obesity and atherosclerosis via modulation of inflammation and lipid metabolism. J Intern Med 268: 320-328.
    • (2010) J Intern Med , vol.268 , pp. 320-328
    • Caesar, R.1    Fak, F.2    Backhed, F.3
  • 12
    • 33845901507 scopus 로고    scopus 로고
    • Microbial ecology: Human gut microbes associated with obesity
    • DOI 10.1038/4441022a, PII 4441022A
    • Ley RE, Turnbaugh PJ, Klein S, Gordon JI (2006) Microbial ecology: human gut microbes associated with obesity. Nature 444: 1022-1023. (Pubitemid 46018512)
    • (2006) Nature , vol.444 , Issue.7122 , pp. 1022-1023
    • Ley, R.E.1    Turnbaugh, P.J.2    Klein, S.3    Gordon, J.I.4
  • 13
    • 67849119163 scopus 로고    scopus 로고
    • The microbiome and obesity: Is obesity linked to our gut flora?
    • Tsai F, Coyle WJ (2009) The microbiome and obesity: is obesity linked to our gut flora? Curr Gastroenterol Rep 11: 307-313.
    • (2009) Curr Gastroenterol Rep , vol.11 , pp. 307-313
    • Tsai, F.1    Coyle, W.J.2
  • 14
    • 78649908827 scopus 로고    scopus 로고
    • The role of the gut microbiota in nonalcoholic fatty liver disease
    • Abu-Shanab A, Quigley EM (2010) The role of the gut microbiota in nonalcoholic fatty liver disease. Nat Rev Gastroenterol Hepatol 7: 691-701.
    • (2010) Nat Rev Gastroenterol Hepatol , vol.7 , pp. 691-701
    • Abu-Shanab, A.1    Quigley, E.M.2
  • 16
    • 70350310104 scopus 로고    scopus 로고
    • Products of the colonic microbiota mediate the effects of diet on colon cancer risk
    • O'Keefe SJ, Ou J, Aufreiter S, O'Connor D, Sharma S, et al. (2009) Products of the colonic microbiota mediate the effects of diet on colon cancer risk. J Nutr 139: 2044-2048.
    • (2009) J Nutr , vol.139 , pp. 2044-2048
    • O'Keefe, S.J.1    Ou, J.2    Aufreiter, S.3    O'Connor, D.4    Sharma, S.5
  • 19
    • 78649270064 scopus 로고    scopus 로고
    • Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes
    • Tasse L, Bercovici J, Pizzut-Serin S, Robe P, Tap J, et al. (2010) Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes. Genome Res 20: 1605-1612.
    • (2010) Genome Res , vol.20 , pp. 1605-1612
    • Tasse, L.1    Bercovici, J.2    Pizzut-Serin, S.3    Robe, P.4    Tap, J.5
  • 21
    • 84862200127 scopus 로고    scopus 로고
    • Complex carbohydrate utilization by the healthy human microbiome
    • Cantarel BL, Lombard V, Henrissat B (2012) Complex carbohydrate utilization by the healthy human microbiome. PLoS One 7: e28742.
    • (2012) PLoS One , vol.7
    • Cantarel, B.L.1    Lombard, V.2    Henrissat, B.3
  • 23
    • 79955783588 scopus 로고    scopus 로고
    • Determinants of the human infant intestinal microbiota after the introduction of first complementary foods in infant samples from five European centres
    • Fallani M, Amarri S, Uusijarvi A, Adam R, Khanna S, et al. (2011) Determinants of the human infant intestinal microbiota after the introduction of first complementary foods in infant samples from five European centres. Microbiology 157: 1385-1392.
    • (2011) Microbiology , vol.157 , pp. 1385-1392
    • Fallani, M.1    Amarri, S.2    Uusijarvi, A.3    Adam, R.4    Khanna, S.5
  • 25
    • 84855173898 scopus 로고    scopus 로고
    • Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts
    • Martens EC, Lowe EC, Chiang H, Pudlo NA, Wu M, et al. (2011) Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts. PLoS Biol 9: e1001221.
    • (2011) PLoS Biol , vol.9
    • Martens, E.C.1    Lowe, E.C.2    Chiang, H.3    Pudlo, N.A.4    Wu, M.5
  • 26
    • 0021349077 scopus 로고
    • The contribution of the large intestine to energy supplies in man
    • McNeil NI (1984) The contribution of the large intestine to energy supplies in man. Am J Clin Nutr 39: 338-342.
    • (1984) Am J Clin Nutr , vol.39 , pp. 338-342
    • McNeil, N.I.1
  • 27
    • 0038326912 scopus 로고    scopus 로고
    • On defining dietary fibre
    • DeVries JW (2003) On defining dietary fibre. Proc Nutr Soc 62: 37-43.
    • (2003) Proc Nutr Soc , vol.62 , pp. 37-43
    • DeVries, J.W.1
  • 29
    • 51349161191 scopus 로고    scopus 로고
    • High-resolution metagenomics targets specific functional types in complex microbial communities
    • Kalyuzhnaya MG, Lapidus A, Ivanova N, Copeland AC, McHardy AC, et al. (2008) High-resolution metagenomics targets specific functional types in complex microbial communities. Nat Biotechnol 26: 1029-1034.
    • (2008) Nat Biotechnol , vol.26 , pp. 1029-1034
    • Kalyuzhnaya, M.G.1    Lapidus, A.2    Ivanova, N.3    Copeland, A.C.4    McHardy, A.C.5
  • 30
    • 79251587455 scopus 로고    scopus 로고
    • Metagenomic discovery of biomass-degrading genes and genomes from cow rumen
    • Hess M, Sczyrba A, Egan R, Kim TW, Chokhawala H, et al. (2011) Metagenomic discovery of biomass-degrading genes and genomes from cow rumen. Science 331: 463-467.
    • (2011) Science , vol.331 , pp. 463-467
    • Hess, M.1    Sczyrba, A.2    Egan, R.3    Kim, T.W.4    Chokhawala, H.5
  • 31
    • 80054750830 scopus 로고    scopus 로고
    • Cellulosomics, a gene-centric approach to investigating the intraspecific diversity and adaptation of Ruminococcus flavefaciens within the rumen
    • Brulc JM, Yeoman CJ, Wilson MK, Berg Miller ME, Jeraldo P, et al. (2011) Cellulosomics, a gene-centric approach to investigating the intraspecific diversity and adaptation of Ruminococcus flavefaciens within the rumen. PLoS One 6: e25329.
    • (2011) PLoS One , vol.6
    • Brulc, J.M.1    Yeoman, C.J.2    Wilson, M.K.3    Berg Miller, M.E.4    Jeraldo, P.5
  • 32
    • 78751584993 scopus 로고    scopus 로고
    • Muramidases found in the foregut microbiome of the Tammar wallaby can direct cell aggregation and biofilm formation
    • Pope PB, Totsika M, Aguirre de Carcer D, Schembri MA, Morrison M (2011) Muramidases found in the foregut microbiome of the Tammar wallaby can direct cell aggregation and biofilm formation. ISME J 5: 341-350.
    • (2011) ISME J , vol.5 , pp. 341-350
    • Pope, P.B.1    Totsika, M.2    Aguirre De Carcer, D.3    Schembri, M.A.4    Morrison, M.5
  • 33
    • 84862001111 scopus 로고    scopus 로고
    • Metagenomics of the Svalbard reindeer rumen microbiome reveals abundance of polysaccharide utilization loci
    • Pope PB, Mackenzie AK, Gregor I, Smith W, Sundset MA, et al. (2012) Metagenomics of the Svalbard reindeer rumen microbiome reveals abundance of polysaccharide utilization loci. PLoS One 7: e38571.
    • (2012) PLoS One , vol.7
    • Pope, P.B.1    Mackenzie, A.K.2    Gregor, I.3    Smith, W.4    Sundset, M.A.5
  • 34
    • 79956301905 scopus 로고    scopus 로고
    • Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans
    • Muegge BD, Kuczynski J, Knights D, Clemente JC, Gonzalez A, et al. (2011) Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans. Science 332: 970-974.
    • (2011) Science , vol.332 , pp. 970-974
    • Muegge, B.D.1    Kuczynski, J.2    Knights, D.3    Clemente, J.C.4    Gonzalez, A.5
  • 36
  • 37
    • 84887849444 scopus 로고    scopus 로고
    • Correlation between body mass index and gut concentrations of Lactobacillus reuteri, Bifidobacterium animalis, Methanobrevibacter smithii and Escherichia coli
    • Lond
    • Million M, Angelakis E, Maraninchi M, Henry M, Giorgi R, et al. (2013) Correlation between body mass index and gut concentrations of Lactobacillus reuteri, Bifidobacterium animalis, Methanobrevibacter smithii and Escherichia coli. Int J Obes (Lond).
    • (2013) Int J Obes
    • Million, M.1    Angelakis, E.2    Maraninchi, M.3    Henry, M.4    Giorgi, R.5
  • 39
    • 61649122339 scopus 로고    scopus 로고
    • Development and validation of a gene expression oligo microarray for the gilthead sea bream (Sparus aurata)
    • Ferraresso S, Vitulo N, Mininni AN, Romualdi C, Cardazzo B, et al. (2008) Development and validation of a gene expression oligo microarray for the gilthead sea bream (Sparus aurata). BMC Genomics 9: 580.
    • (2008) BMC Genomics , vol.9 , pp. 580
    • Ferraresso, S.1    Vitulo, N.2    Mininni, A.N.3    Romualdi, C.4    Cardazzo, B.5
  • 41
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • (2012) Structure, function and diversity of the healthy human microbiome. Nature 486: 207-214.
    • (2012) Nature , vol.486 , pp. 207-214
  • 42
    • 77950251400 scopus 로고    scopus 로고
    • A human gut microbial gene catalogue established by metagenomic sequencing
    • Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, et al. (2010) A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464: 59-65.
    • (2010) Nature , vol.464 , pp. 59-65
    • Qin, J.1    Li, R.2    Raes, J.3    Arumugam, M.4    Burgdorf, K.S.5
  • 43
    • 77953219138 scopus 로고    scopus 로고
    • The biochemistry and structural biology of plant cell wall deconstruction
    • Gilbert HJ (2010) The biochemistry and structural biology of plant cell wall deconstruction. Plant Physiol 153: 444-455.
    • (2010) Plant Physiol , vol.153 , pp. 444-455
    • Gilbert, H.J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.