A bispyrene derivative as a selective fluorescent probe for RNA

Chemical Communications

Volumn 50, Issue 19, 2014, Pages 2505-2507

  Liu, Yifan ^a   Jun, Eun Jin ^a   Kim, Gyoungmi ^a   Lee, Ae Ree ^b   Lee, Joon Hwa ^b   Yoon, Juyoung ^a  

^a Ewha Womans University   (South Korea)

^b Gyeongsang National University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

FLUORESCENT DYES; HELA CELLS; HUMANS; PYRENES; RNA;

1 HYDROXYPYRENE 2 CARBALDEHYDE; DACTINOMYCIN; DIETHYLENETRIAMINE; FLUORESCENT DYE; PYRENE DERIVATIVE; RNA; UNCLASSIFIED DRUG;

AQUEOUS SOLUTION; ARTICLE; CARBON NUCLEAR MAGNETIC RESONANCE; CELL CULTURE; CELL DEATH; CELL GROWTH; CELL PROLIFERATION; CONFOCAL MICROSCOPY; CULTURE MEDIUM; CYTOTOXICITY; FLUORESCENCE; FLUORESCENCE IMAGING; HELA CELL; HYDROGEN BOND; MASS SPECTROMETRY; MOLECULAR INTERACTION; PH; PROTON NUCLEAR MAGNETIC RESONANCE; RNA CONFORMATION; RNA DEGRADATION; RNA SEQUENCE; RNA SYNTHESIS; RNA TRANSLATION;

EID: 84893821432     PISSN: 13597345     EISSN: 1364548X     Source Type: Journal    
DOI: 10.1039/c3cc49430f     Document Type: Article

References (45)

1. R. Dahm, Dev. Biol., 2005, 278, 274-288.
2. E. Szathmáry, Trends Genet., 1999, 15, 223-229.
3. G. North, Nature, 1987, 328, 18.
4. H. N. Kim, J. Lim, H. N. Lee, J.-W. Ryu, M. J. Kim, J. Lee, D.-U. Lee, Y. Kim, S.-J. Kim, K. D. Lee, H.-S. Lee, J. Yoon, Org. Lett., 2011, 13, 1314.
5. A. Okamoto, A. Kanatani, I. Saito, J. Am. Chem. Soc., 2004, 126, 4820.
6. A. Okamoto, Y. Ochi, I. Saito, Chem. Commun., 2005, 1128.
7. M. Kitamura, A. Nimura, K. Yamana, T. Shimidzu, Nucleic Acids Res., Symp. Ser., 1991, 25, 67.
8. F. D. Lews, Y. Zhang, R. L. Letsinger, J. Am. Chem. Soc., 1997, 119, 5451.
9. Y. J. Seo, I. J. Lee, J. W. Yi, B. H. Kim, Chem. Commun., 2007, 2817.
10. H. N. Kim, E.-H. Lee, Z. Xu, H.-E. Kim, H.-S. Lee, J.-H. Lee, J. Yoon, Biomaterials, 2012, 33, 2282.
11. C. Allain, D. Monchaud, M. P. Teulade-Fichou, J. Am. Chem. Soc., 2006, 128, 11890.
12. P. Yang, A. De Cian, M. P. Teulade-Fichou, J. L. Mergny, D. Monchaud, Angew. Chem., Int. Ed., 2009, 48, 2188.
13. Y. Zhou, Z. Xu, J. Yoon, Chem. Soc. Rev., 2011, 40, 2222.
14. T. Sakamoto, A. Ojida, I. Hamachi, Chem. Commun., 2009, 141.
15. C. Li, M. Numata, M. Tekeuchi, S. Shinkai, Angew. Chem., Int. Ed., 2005, 44, 6371.
16. J. Y. Kwon, N. J. Singh, H. Kim, S. K. Kim, K. S. Kim, J. Yoon, J. Am. Chem. Soc., 2004, 126, 8892.
17. P. J. Santangelo, A. W. Lifland, P. Curt, Y. Sasaki, G. J. Bassell, M. E. Lindquist, J. E. Crowe Jr, Nat. Methods, 2009, 6, 347.
18. S. Ikeda, T. Kubota, H. Yanagisawa, M. Yuki, A. Okamoto, Nuceic Acids Symp. Ser., 2009, 53, 155.
19. N. A. O'Connor, N. Stevens, D. Samaroo, M. R. Solomon, A. A. Martí, J. Dyer, H. Vishwasrao, D. L. Akins, E. R. Kandel, N. J. Turro, Chem. Commun., 2009, 2640.
20. A. W. gifland, C. Zurla, P. J. Santangelo, Bioconjugate Chem., 2010, 21, 483.
21. S. Sando, E. T. Kool, J. Am. Chem. Soc., 2002, 124, 9686.
22. R. Kierzek, Y. Li, D. H. Turner, P. C. Bevilacqua, J. Am. Chem. Soc., 1993, 115, 4985.
23. Z. Xu, N. R. Song, J. H. Moon, J. Y. Lee, J. Yoon, Org. Biomol. Chem., 2011, 9, 8340.
24. S. K. Silverman, T. R. Cech, Biochemistry, 1999, 38, 14224.
25. K. Yamana, R. Iwase, S. Furutani, H. Tsuchida, H. Zako, T. Yamaoka, A. Murakami, Nucleic Acids Res., 1999, 27, 2387.
26. A. Mahara, R. Iwase, T. Sakamoto, K. Yamana, T. Yamaoka, A. Murakami, Angew. Chem., Int. Ed., 2002, 41, 3648.
27. H. S. Jeong, S. Kang, J. Y. Lee, B. H. Kim, Org. Biomol. Chem., 2009, 7, 921.
28. H. Jeon, S. Lee, Y. Li, S. Park, J. Yoon, J. Mater. Chem., 2012, 22, 3795.
29. G. V. Zyryanov, M. A. Palacios, P. Anzenbacher Jr., Angew. Chem., Int. Ed., 2007, 46, 7849.
30. Y. Kurishita, T. Kohira, A. Ojida, I. Hamachi, J. Am. Chem. Soc., 2010, 132, 13290.
31. X. Chen, M. J. Jou, J. Yoon, Org. Lett., 2009, 11, 2181.
32. H.-W. Rhee, H.-Y. Choi, K. Han, J.-I. Hong, J. Am. Chem. Soc., 2007, 129, 4524.
33. T. Noguchi, A. Dawn, D. Yoshihara, Y. Tsuchiya, T. Yamamoto, S. Shinkai, Macromol. Rapid Commun., 2013, 34, 779.
34. Q. Li, Y. K. Kim, J. Namm, A. Kulkarni, G. Rosania, Y. H. Ahn, Y. T. Chang, Chem. Biol., 2006, 13, 615.
35. S. Feng, Y. K. Kim, S. Yang, Y. T. Chang, Chem. Commun., 2010, 46, 436.
36. B. Shirinfar, N. Ahmed, Y. S. Park, G.-S. Cho, I. S. Youn, J.-K. Han, H. G. Nam, K. S. Kim, J. Am. Chem. Soc., 2013, 135, 90.
37. Y. Zhou, W. Fang, Y. Kim, S. Kim, J. Yoon, Org. Lett., 2009, 11, 4442.
38. P. Demerseman, J. Einhorn, J. F. Gourvest, R. Royer, J. Heterocycl. Chem., 1985, 22, 39.
39. J. Wu, Y. Zou, C. Li, W. Sicking, I. Piantanida, T. Yi, C. Schmuck, J. Am. Chem. Soc., 2012, 134, 1958.
40. Z. Xu, N. J. Singh, J. Lim, J. Pan, H. N. Kim, S. Park, K. S. Kim, J. Yoon, J. Am. Chem. Soc., 2009, 131, 15528.
41. H. S. Jung, M. Park, D. Y. Han, E. Kim, C. Lee, S. Ham, J. S. Kim, Org. Lett., 2009, 11, 3378.
42. A. Zetterberg, O. Skold, Exp. Cell Res., 1969, 57, 114.
43. C. M. Smith, J. A. Steitz, Mol. Cell. Biol., 1998, 18, 6897.
44. X. Liu, K. J. Peyton, A. R. Shebib, H. Wang, W. Durante, Biochem. Pharmacol., 2011, 82, 371.
45. M. Huanga, Y. Ji, K. Itahana, Y. Zhang, B. Mitchell, Leuk. Res., 2008, 32, 131.