Transcriptome de novo assembly sequencing and analysis of the toxic dinoflagellate Alexandrium catenella using the Illumina platform

Gene

Volumn 537, Issue 2, 2014, Pages 285-293

  Zhang, Shu ^a   Sui, Zhenghong ^a   Chang, Lianpeng ^a   Kang, KyoungHo ^b   Ma, Jinhua ^a   Kong, Fanna ^a   Zhou, Wei ^a   Wang, Jinguo ^a   Guo, Liliang ^a   Geng, Huili ^a   Zhong, Jie ^a   Ma, Qingxia ^a  

^a Ocean University of China   (China)

^b Chonnam National University   (South Korea)

Author keywords

Alexandrium catenella; Endocytosis; High throughput sequencing; Nucleosomal histones; Red tide

Indexed keywords

CLATHRIN; HISTONE; MESSENGER RNA; PROTEIN; SPLICED LEADER RNA; TRANSCRIPTOME; TRINUCLEOTIDE;

ALEXANDRIUM CATENELLA; AMINO ACID SEQUENCE; ANIMAL CELL; ANIMAL EXPERIMENT; ARTICLE; BASE PAIRING; CONTROLLED STUDY; DINOFLAGELLATE; ENDOCYTOSIS; GENE CLUSTER; GENE EXPRESSION; GENE MAPPING; GENE ONTOLOGY; GENETIC DATABASE; GENOMICS; HETEROTROPHY; HIGH THROUGHPUT SEQUENCING; HISTONE MODIFICATION; NEXT GENERATION SEQUENCING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SIGNAL TRANSDUCTION; SIMPLE SEQUENCE REPEAT; TRANS SPLICING; TRANSCRIPTOMICS; TRINUCLEOTIDE REPEAT;

ALEXANDRIUM CATENELLA; DINOPHYCEAE;

ALEXANDRIUM CATENELLA; BASE PAIR; BLAST-LIKE ALIGNMENT TOOL; BLAT; BP; CLUSTERS OF ORTHOLOGOUS GROUPS; COGS; EDTA; ENDOCYTOSIS; EST; ETHYLENE DIAMINE TETRAACETIC ACID; EXPRESSED SEQUENCE TAG; GENE ONTOLOGY; GO; HCCS; HEAT SHOCK PROTEIN; HIGH-THROUGHPUT SEQUENCING; HISTONE-LIKE PROTEIN SEQUENCES; HSP; KEGG; KYOTO ENCYCLOPEDIA OF GENES AND GENOMES; MANGANESE; MAXIMUM LIKELIHOOD; ML; MN; NATIONAL CENTER FOR BIOTECHNOLOGY INFORMATION; NCBI; NEXT-GENERATION SEQUENCING; NGS; NON-REDUNDANT NUCLEOTIDE SEQUENCES; NON-REDUNDANT PROTEIN SEQUENCES; NR; NT; NUCLEOSOMAL HISTONES; P; PARALYTIC SHELLFISH POISONING; PHOSPHORUS; PSP; READS PER KILOBASE PER MILLION SEQUENCED READS; RED TIDE; RPKM; SBS; SDS; SEQUENCING BY SYNTHESIS; SIMPLE SEQUENCE REPEAT; SL; SODIUM DODECYL SULFATE; SPLICED LEADER; SSR; UNTRANSLATED REGIONS; UTR;

BASE SEQUENCE; DINOFLAGELLIDA; ENDOCYTOSIS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HISTONES; MICROSATELLITE REPEATS; MOLECULAR SEQUENCE ANNOTATION; MOLECULAR SEQUENCE DATA; NUCLEOTIDE MOTIFS; PHYLOGENY; SEQUENCE ANALYSIS, DNA; TRANS-SPLICING; TRANSCRIPTOME;

EID: 84893664880     PISSN: 03781119     EISSN: 18790038     Source Type: Journal    
DOI: 10.1016/j.gene.2013.12.041     Document Type: Article

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