-
1
-
-
80053294883
-
Sesame breeding
-
Oxford: John Wiley & Sons, Janick J
-
Ashri A. Sesame breeding. Plant Breeding Reviews. Volume 16 2010, Oxford: John Wiley & Sons, Janick J.
-
(2010)
Plant Breeding Reviews. Volume 16
-
-
Ashri, A.1
-
2
-
-
0000801577
-
Evidence for cultivation of sesame in the ancient world
-
Bedigian D, Harlan J. Evidence for cultivation of sesame in the ancient world. Econ Bot 1986, 40(2):137-154.
-
(1986)
Econ Bot
, vol.40
, Issue.2
, pp. 137-154
-
-
Bedigian, D.1
Harlan, J.2
-
3
-
-
0000963716
-
Sesamin, sesamolin and the origin of sesame
-
Bedigian D, Seigler DS, Harlan JR. Sesamin, sesamolin and the origin of sesame. Biochem Syst Ecol 1985, 13(2):133-139.
-
(1985)
Biochem Syst Ecol
, vol.13
, Issue.2
, pp. 133-139
-
-
Bedigian, D.1
Seigler, D.S.2
Harlan, J.R.3
-
4
-
-
0022769732
-
Contribution of lignan analogues to antioxidative activity of refined unroasted sesame seed oil
-
Fukuda Y, Nagata M, Osawa T, Namiki M. Contribution of lignan analogues to antioxidative activity of refined unroasted sesame seed oil. J Am Oil Chem Soc 1986, 63(8):1027-1031.
-
(1986)
J Am Oil Chem Soc
, vol.63
, Issue.8
, pp. 1027-1031
-
-
Fukuda, Y.1
Nagata, M.2
Osawa, T.3
Namiki, M.4
-
5
-
-
33847337461
-
Antioxidant protection of edible oils
-
10.1007/s11130-006-0040-6, 17285359
-
Cheung SC, Szeto YT, Benzie IF. Antioxidant protection of edible oils. Plant Foods Hum Nutr 2007, 62(1):39-42. 10.1007/s11130-006-0040-6, 17285359.
-
(2007)
Plant Foods Hum Nutr
, vol.62
, Issue.1
, pp. 39-42
-
-
Cheung, S.C.1
Szeto, Y.T.2
Benzie, I.F.3
-
6
-
-
0028821244
-
Changes of lipid, protein, RNA and fatty acid composition in developing sesame (Sesamum indicum L.) seeds
-
Chung CH, Yee YJ, Kim DH, Kim HK, Chung DS. Changes of lipid, protein, RNA and fatty acid composition in developing sesame (Sesamum indicum L.) seeds. Plant Sci 1995, 109(2):237-243.
-
(1995)
Plant Sci
, vol.109
, Issue.2
, pp. 237-243
-
-
Chung, C.H.1
Yee, Y.J.2
Kim, D.H.3
Kim, H.K.4
Chung, D.S.5
-
7
-
-
67650161507
-
A genetic linkage map construction for sesame (Sesamum indicum L.)
-
10.1007/BF03191152, 21936032
-
Wei L-B, Zhang H-Y, Zheng Y-Z, Miao H-M, Zhang T-Z, Guo W-Z. A genetic linkage map construction for sesame (Sesamum indicum L.). Genes & Genomics 2009, 31(2):199-208. 10.1007/BF03191152, 21936032.
-
(2009)
Genes & Genomics
, vol.31
, Issue.2
, pp. 199-208
-
-
Wei, L.-B.1
Zhang, H.-Y.2
Zheng, Y.-Z.3
Miao, H.-M.4
Zhang, T.-Z.5
Guo, W.-Z.6
-
8
-
-
77957853026
-
Genetic improvement of oil quality in sesame (Sesamum indicum L.): assembling tools
-
Swedish University of Agricultural Sciences, Department of Crop Science
-
Were B. Genetic improvement of oil quality in sesame (Sesamum indicum L.): assembling tools. PhD thesis 2006, Swedish University of Agricultural Sciences, Department of Crop Science.
-
(2006)
PhD thesis
-
-
Were, B.1
-
9
-
-
33645638896
-
Genetic relationship and diversity in a sesame (Sesamum indicum L.) germplasm collection using amplified fragment length polymorphism (AFLP)
-
1434769, 16483380
-
Laurentin H, Karlovsky P. Genetic relationship and diversity in a sesame (Sesamum indicum L.) germplasm collection using amplified fragment length polymorphism (AFLP). BMC Genetics 2006, 7(1):10. 1434769, 16483380.
-
(2006)
BMC Genetics
, vol.7
, Issue.1
, pp. 10
-
-
Laurentin, H.1
Karlovsky, P.2
-
10
-
-
3442887470
-
Analysis of genetic diversity in Turkish sesame (Sesamum indicum L.) populations using RAPD markers
-
Ercan AG, Taskin M, Turgut K. Analysis of genetic diversity in Turkish sesame (Sesamum indicum L.) populations using RAPD markers. Genet Resour Crop Ev 2004, 51(6):599-607.
-
(2004)
Genet Resour Crop Ev
, vol.51
, Issue.6
, pp. 599-607
-
-
Ercan, A.G.1
Taskin, M.2
Turgut, K.3
-
11
-
-
0030094298
-
Structure and expression of two seed-specific cDNA clones encoding stearoyl-acyl carrier protein desaturase from sesame, Sesamum indicum L
-
Yukawa Y, Takaiwa F, Shoji K, Masuda K, Yamada K. Structure and expression of two seed-specific cDNA clones encoding stearoyl-acyl carrier protein desaturase from sesame, Sesamum indicum L. Plant Cell Physiol 1996, 37(2):201-205.
-
(1996)
Plant Cell Physiol
, vol.37
, Issue.2
, pp. 201-205
-
-
Yukawa, Y.1
Takaiwa, F.2
Shoji, K.3
Masuda, K.4
Yamada, K.5
-
12
-
-
0034782360
-
Characterization and temporal expression of a [omega]-6 fatty acid desaturase cDNA from sesame (Sesamum indicum L.) seeds
-
Jin U-H, Lee J-W, Chung Y-S, Lee J-H, Yi Y-B, Kim Y-K, Hyung N-I, Pyee J-H, Chung C-H. Characterization and temporal expression of a [omega]-6 fatty acid desaturase cDNA from sesame (Sesamum indicum L.) seeds. Plant Sci 2001, 161(5):935-941.
-
(2001)
Plant Sci
, vol.161
, Issue.5
, pp. 935-941
-
-
Jin, U.-H.1
Lee, J.-W.2
Chung, Y.-S.3
Lee, J.-H.4
Yi, Y.-B.5
Kim, Y.-K.6
Hyung, N.-I.7
Pyee, J.-H.8
Chung, C.-H.9
-
13
-
-
33748286787
-
Seed-specific expression of sesame microsomal oleic acid desaturase is controlled by combinatorial properties between negative cis-regulatory elements in the SeFAD2; promoter and enhancers in the 5'-UTR intron
-
10.1007/s00438-006-0148-2, 16862401
-
Kim M, Kim H, Shin J, Chung C-H, Ohlrogge J, Suh M. Seed-specific expression of sesame microsomal oleic acid desaturase is controlled by combinatorial properties between negative cis-regulatory elements in the SeFAD2; promoter and enhancers in the 5'-UTR intron. Mol Genet Genomics 2006, 276(4):351-368. 10.1007/s00438-006-0148-2, 16862401.
-
(2006)
Mol Genet Genomics
, vol.276
, Issue.4
, pp. 351-368
-
-
Kim, M.1
Kim, H.2
Shin, J.3
Chung, C.-H.4
Ohlrogge, J.5
Suh, M.6
-
14
-
-
33244479860
-
Development of polymorphic microsatellite markers in sesame (Sesamum indicum L.)
-
Dixit A, Jin M-H, Chung J-W, Yu J-W, Chung H-K, Ma K-H, Park Y-J, Cho E-G. Development of polymorphic microsatellite markers in sesame (Sesamum indicum L.). Mol Ecol Notes 2005, 5(4):736-738.
-
(2005)
Mol Ecol Notes
, vol.5
, Issue.4
, pp. 736-738
-
-
Dixit, A.1
Jin, M.-H.2
Chung, J.-W.3
Yu, J.-W.4
Chung, H.-K.5
Ma, K.-H.6
Park, Y.-J.7
Cho, E.-G.8
-
15
-
-
65649083784
-
Development and utilization of EST-derived microsatellites in sesame (Sesamum indicum L.)
-
Wei L-B, Zhang H-Y, Zheng Y-Z, Guo W-Z, Zhang T-Z. Development and utilization of EST-derived microsatellites in sesame (Sesamum indicum L.). Acta Biochim Biophys Sin (Shanghai) 2008, 34(12):2077-2084.
-
(2008)
Acta Biochim Biophys Sin (Shanghai)
, vol.34
, Issue.12
, pp. 2077-2084
-
-
Wei, L.-B.1
Zhang, H.-Y.2
Zheng, Y.-Z.3
Guo, W.-Z.4
Zhang, T.-Z.5
-
16
-
-
7844227430
-
The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis
-
Powell W, Morgante M, Andre C, Hanafey M, Vogel J, Tingey S, Rafalski A. The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Mol Breed 1996, 2(3):225-238.
-
(1996)
Mol Breed
, vol.2
, Issue.3
, pp. 225-238
-
-
Powell, W.1
Morgante, M.2
Andre, C.3
Hanafey, M.4
Vogel, J.5
Tingey, S.6
Rafalski, A.7
-
17
-
-
0036007439
-
Strategies for microsatellite isolation: a review
-
10.1046/j.0962-1083.2001.01418.x, 11903900
-
Zane L, Bargelloni L, Patarnello T. Strategies for microsatellite isolation: a review. Mol Ecol 2002, 11(1):1-16. 10.1046/j.0962-1083.2001.01418.x, 11903900.
-
(2002)
Mol Ecol
, vol.11
, Issue.1
, pp. 1-16
-
-
Zane, L.1
Bargelloni, L.2
Patarnello, T.3
-
18
-
-
0038717275
-
How much effort is required to isolate nuclear microsatellites from plants?
-
10.1046/j.1365-294X.2003.01825.x, 12755865
-
Squirrell J, Hollingsworth PM, Woodhead M, Russell J, Lowe AJ, Gibby M, Powell W. How much effort is required to isolate nuclear microsatellites from plants?. Mol Ecol 2003, 12(6):1339-1348. 10.1046/j.1365-294X.2003.01825.x, 12755865.
-
(2003)
Mol Ecol
, vol.12
, Issue.6
, pp. 1339-1348
-
-
Squirrell, J.1
Hollingsworth, P.M.2
Woodhead, M.3
Russell, J.4
Lowe, A.J.5
Gibby, M.6
Powell, W.7
-
19
-
-
8744301202
-
Robust simple sequence repeat markers for spruce (Picea spp.) from expressed sequence tags
-
10.1007/s00122-004-1742-5, 15351929
-
Rungis D, Berube Y, Zhang J, Ralph S, Ritland CE, Ellis BE, Douglas C, Bohlmann J, Ritland K. Robust simple sequence repeat markers for spruce (Picea spp.) from expressed sequence tags. Theor Appl Genet 2004, 109(6):1283-1294. 10.1007/s00122-004-1742-5, 15351929.
-
(2004)
Theor Appl Genet
, vol.109
, Issue.6
, pp. 1283-1294
-
-
Rungis, D.1
Berube, Y.2
Zhang, J.3
Ralph, S.4
Ritland, C.E.5
Ellis, B.E.6
Douglas, C.7
Bohlmann, J.8
Ritland, K.9
-
20
-
-
0034051568
-
Analysis of SSRs derived from grape ESTs
-
Scott KD, Eggler P, Seaton G, Rossetto M, Ablett EM, Lee LS, Henry RJ. Analysis of SSRs derived from grape ESTs. Theor Appl Genet 2000, 100(5):723-726.
-
(2000)
Theor Appl Genet
, vol.100
, Issue.5
, pp. 723-726
-
-
Scott, K.D.1
Eggler, P.2
Seaton, G.3
Rossetto, M.4
Ablett, E.M.5
Lee, L.S.6
Henry, R.J.7
-
21
-
-
46049117054
-
Transferability of the EST-SSRs developed on Nules clementine (Citrus clementina Hort ex Tan) to other Citrus species and their effectiveness for genetic mapping
-
10.1186/1471-2164-9-287, 2435559, 18558001
-
Luro FL, Costantino G, Terol J, Argout X, Allario T, Wincker P, Talon M, Ollitrault P, Morillon R. Transferability of the EST-SSRs developed on Nules clementine (Citrus clementina Hort ex Tan) to other Citrus species and their effectiveness for genetic mapping. BMC Genomics 2008, 9:287. 10.1186/1471-2164-9-287, 2435559, 18558001.
-
(2008)
BMC Genomics
, vol.9
, pp. 287
-
-
Luro, F.L.1
Costantino, G.2
Terol, J.3
Argout, X.4
Allario, T.5
Wincker, P.6
Talon, M.7
Ollitrault, P.8
Morillon, R.9
-
22
-
-
33845869870
-
Identification, characterization and utilization of EST-derived genic microsatellite markers for genome analyses of coffee and related species
-
10.1007/s00122-006-0440-x, 17115127
-
Aggarwal RK, Hendre PS, Varshney RK, Bhat PR, Krishnakumar V, Singh L. Identification, characterization and utilization of EST-derived genic microsatellite markers for genome analyses of coffee and related species. Theor Appl Genet 2007, 114(2):359-372. 10.1007/s00122-006-0440-x, 17115127.
-
(2007)
Theor Appl Genet
, vol.114
, Issue.2
, pp. 359-372
-
-
Aggarwal, R.K.1
Hendre, P.S.2
Varshney, R.K.3
Bhat, P.R.4
Krishnakumar, V.5
Singh, L.6
-
23
-
-
33748967940
-
SSR mining in coffee tree EST databases: potential use of EST-SSRs as markers for the Coffea genus
-
10.1007/s00438-006-0153-5, 16924545
-
Poncet V, Rondeau M, Tranchant C, Cayrel A, Hamon S, de Kochko A, Hamon P. SSR mining in coffee tree EST databases: potential use of EST-SSRs as markers for the Coffea genus. Mol Genet Genomics 2006, 276(5):436-449. 10.1007/s00438-006-0153-5, 16924545.
-
(2006)
Mol Genet Genomics
, vol.276
, Issue.5
, pp. 436-449
-
-
Poncet, V.1
Rondeau, M.2
Tranchant, C.3
Cayrel, A.4
Hamon, S.5
de Kochko, A.6
Hamon, P.7
-
24
-
-
1542291042
-
Medicago truncatula EST-SSRs reveal cross-species genetic markers for Medicago spp
-
10.1007/s00122-003-1450-6, 13679975
-
Eujayl I, Sledge MK, Wang L, May GD, Chekhovskiy K, Zwonitzer JC, Mian MA. Medicago truncatula EST-SSRs reveal cross-species genetic markers for Medicago spp. Theor Appl Genet 2004, 108(3):414-422. 10.1007/s00122-003-1450-6, 13679975.
-
(2004)
Theor Appl Genet
, vol.108
, Issue.3
, pp. 414-422
-
-
Eujayl, I.1
Sledge, M.K.2
Wang, L.3
May, G.D.4
Chekhovskiy, K.5
Zwonitzer, J.C.6
Mian, M.A.7
-
25
-
-
0031687461
-
Cross-species amplification of soybean (Glycine max) simple sequence repeats (SSRs) within the genus and other legume genera: implications for the transferability of SSRs in plants
-
Peakall R, Gilmore S, Keys W, Morgante M, Rafalski A. Cross-species amplification of soybean (Glycine max) simple sequence repeats (SSRs) within the genus and other legume genera: implications for the transferability of SSRs in plants. Mol Biol Evol 1998, 15(10):1275-1287.
-
(1998)
Mol Biol Evol
, vol.15
, Issue.10
, pp. 1275-1287
-
-
Peakall, R.1
Gilmore, S.2
Keys, W.3
Morgante, M.4
Rafalski, A.5
-
26
-
-
0037854629
-
Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.)
-
Thiel T, Michalek W, Varshney RK, Graner A. Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.). Theor Appl Genet 2003, 106(3):411-422.
-
(2003)
Theor Appl Genet
, vol.106
, Issue.3
, pp. 411-422
-
-
Thiel, T.1
Michalek, W.2
Varshney, R.K.3
Graner, A.4
-
27
-
-
23944517036
-
High transferability of bread wheat EST-derived SSRs to other cereals
-
10.1007/s00122-005-2041-5, 16034582
-
Zhang LY, Bernard M, Leroy P, Feuillet C, Sourdille P. High transferability of bread wheat EST-derived SSRs to other cereals. Theor Appl Genet 2005, 111(4):677-687. 10.1007/s00122-005-2041-5, 16034582.
-
(2005)
Theor Appl Genet
, vol.111
, Issue.4
, pp. 677-687
-
-
Zhang, L.Y.1
Bernard, M.2
Leroy, P.3
Feuillet, C.4
Sourdille, P.5
-
28
-
-
0034090835
-
Diversity of microsatellites derived from genomic libraries and GenBank sequences in rice (Oryza sativa L.)
-
Cho YG, Ishii T, Temnykh S, Chen X, Lipovich L, McCouch SR, Park WD, Ayres N, Cartinhour S. Diversity of microsatellites derived from genomic libraries and GenBank sequences in rice (Oryza sativa L.). Theor Appl Genet 2000, 100(5):713-722.
-
(2000)
Theor Appl Genet
, vol.100
, Issue.5
, pp. 713-722
-
-
Cho, Y.G.1
Ishii, T.2
Temnykh, S.3
Chen, X.4
Lipovich, L.5
McCouch, S.R.6
Park, W.D.7
Ayres, N.8
Cartinhour, S.9
-
29
-
-
0035026747
-
Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross transferable to erianthus and sorghum
-
10.1016/S0168-9452(01)00365-X, 11337068
-
Cordeiro GM, Casu R, McIntyre CL, Manners JM, Henry RJ. Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross transferable to erianthus and sorghum. Plant Sci 2001, 160(6):1115-1123. 10.1016/S0168-9452(01)00365-X, 11337068.
-
(2001)
Plant Sci
, vol.160
, Issue.6
, pp. 1115-1123
-
-
Cordeiro, G.M.1
Casu, R.2
McIntyre, C.L.3
Manners, J.M.4
Henry, R.J.5
-
30
-
-
4043111253
-
Single-copy, species-transferable microsatellite markers developed from loblolly pine ESTs
-
Liewlaksaneeyanawin C, Ritland CE, El-Kassaby YA, Ritland K. Single-copy, species-transferable microsatellite markers developed from loblolly pine ESTs. Theor Appl Genet 2004, 109(2):361-369.
-
(2004)
Theor Appl Genet
, vol.109
, Issue.2
, pp. 361-369
-
-
Liewlaksaneeyanawin, C.1
Ritland, C.E.2
El-Kassaby, Y.A.3
Ritland, K.4
-
31
-
-
33847051947
-
The molecular ecologist's guide to expressed sequence tags
-
Bouck A, Vision T. The molecular ecologist's guide to expressed sequence tags. Mol Ecol 2007, 16(5):907-924.
-
(2007)
Mol Ecol
, vol.16
, Issue.5
, pp. 907-924
-
-
Bouck, A.1
Vision, T.2
-
32
-
-
40049108105
-
Gene discovery and annotation using LCM-454 transcriptome sequencing
-
1356123, 16344566
-
Emrich SJ, Barbazuk WB, Li L, Schnable PS. Gene discovery and annotation using LCM-454 transcriptome sequencing. Genome Res 2006, 16(12):1-5. 1356123, 16344566.
-
(2006)
Genome Res
, vol.16
, Issue.12
, pp. 1-5
-
-
Emrich, S.J.1
Barbazuk, W.B.2
Li, L.3
Schnable, P.S.4
-
33
-
-
41149167170
-
Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing
-
10.1111/j.1365-294X.2008.03666.x, 18266620
-
Vera JC, Wheat CW, Fescemyer HW, Frilander MJ, Crawford DL, Hanski I, Marden JH. Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing. Mol Ecol 2008, 17(7):1636-1647. 10.1111/j.1365-294X.2008.03666.x, 18266620.
-
(2008)
Mol Ecol
, vol.17
, Issue.7
, pp. 1636-1647
-
-
Vera, J.C.1
Wheat, C.W.2
Fescemyer, H.W.3
Frilander, M.J.4
Crawford, D.L.5
Hanski, I.6
Marden, J.H.7
-
34
-
-
34548128406
-
SNP discovery via 454 transcriptome sequencing
-
10.1111/j.1365-313X.2007.03193.x, 2169515, 17662031
-
Barbazuk WB, Emrich SJ, Chen HD, Li L, Schnable PS. SNP discovery via 454 transcriptome sequencing. Plant J 2007, 51(5):910-918. 10.1111/j.1365-313X.2007.03193.x, 2169515, 17662031.
-
(2007)
Plant J
, vol.51
, Issue.5
, pp. 910-918
-
-
Barbazuk, W.B.1
Emrich, S.J.2
Chen, H.D.3
Li, L.4
Schnable, P.S.5
-
35
-
-
48249125753
-
High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
-
10.1186/1471-2164-9-312, 2483731, 18590545
-
Novaes E, Drost DR, Farmerie WG, Pappas GJ, Grattapaglia D, Sederoff RR, Kirst M. High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome. BMC Genomics 2008, 9:312. 10.1186/1471-2164-9-312, 2483731, 18590545.
-
(2008)
BMC Genomics
, vol.9
, pp. 312
-
-
Novaes, E.1
Drost, D.R.2
Farmerie, W.G.3
Pappas, G.J.4
Grattapaglia, D.5
Sederoff, R.R.6
Kirst, M.7
-
36
-
-
49249097861
-
Scanning the genome for gene single nucleotide polymorphisms involved in adaptive population differentiation in white spruce
-
10.1111/j.1365-294X.2008.03840.x, 2613251, 18662225
-
Namroud MC, Beaulieu J, Juge N, Laroche J, Bousquet J. Scanning the genome for gene single nucleotide polymorphisms involved in adaptive population differentiation in white spruce. Mol Ecol 2008, 17(16):3599-3613. 10.1111/j.1365-294X.2008.03840.x, 2613251, 18662225.
-
(2008)
Mol Ecol
, vol.17
, Issue.16
, pp. 3599-3613
-
-
Namroud, M.C.1
Beaulieu, J.2
Juge, N.3
Laroche, J.4
Bousquet, J.5
-
37
-
-
77951894310
-
Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery
-
10.1186/1471-2164-11-180, 2851599, 20233449
-
Parchman T, Geist K, Grahnen J, Benkman C, Buerkle CA. Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery. BMC Genomics 2010, 11(1):180. 10.1186/1471-2164-11-180, 2851599, 20233449.
-
(2010)
BMC Genomics
, vol.11
, Issue.1
, pp. 180
-
-
Parchman, T.1
Geist, K.2
Grahnen, J.3
Benkman, C.4
Buerkle, C.A.5
-
38
-
-
77951121533
-
De novo sequencing and analysis of the American ginseng root transcriptome using a GS FLX Titanium platform to discover putative genes involved in ginsenoside biosynthesis
-
10.1186/1471-2164-11-262, 2873478, 20416102
-
Sun C, Li Y, Wu Q, Luo H, Sun Y, Song J, Lui E, Chen S. De novo sequencing and analysis of the American ginseng root transcriptome using a GS FLX Titanium platform to discover putative genes involved in ginsenoside biosynthesis. BMC Genomics 2010, 11(1):262. 10.1186/1471-2164-11-262, 2873478, 20416102.
-
(2010)
BMC Genomics
, vol.11
, Issue.1
, pp. 262
-
-
Sun, C.1
Li, Y.2
Wu, Q.3
Luo, H.4
Sun, Y.5
Song, J.6
Lui, E.7
Chen, S.8
-
39
-
-
64749084488
-
An approach to transcriptome analysis of non-model organisms using short-read sequences
-
Collins LJ, Biggs PJ, Voelckel C, Joly S. An approach to transcriptome analysis of non-model organisms using short-read sequences. Genome Inform 2008, 21:3-14.
-
(2008)
Genome Inform
, vol.21
, pp. 3-14
-
-
Collins, L.J.1
Biggs, P.J.2
Voelckel, C.3
Joly, S.4
-
40
-
-
64749090107
-
Single nucleotide polymorphism (SNP) discovery in the polyploid Brassica napus using Solexa transcriptome sequencing
-
10.1111/j.1467-7652.2008.00396.x, 19207216
-
Trick M, Long Y, Meng J, Bancroft I. Single nucleotide polymorphism (SNP) discovery in the polyploid Brassica napus using Solexa transcriptome sequencing. Plant Biotechnol J 2009, 7(4):334-346. 10.1111/j.1467-7652.2008.00396.x, 19207216.
-
(2009)
Plant Biotechnol J
, vol.7
, Issue.4
, pp. 334-346
-
-
Trick, M.1
Long, Y.2
Meng, J.3
Bancroft, I.4
-
41
-
-
43149086380
-
ALLPATHS de novo assembly of whole-genome shotgun microreads
-
10.1101/gr.7337908, 2336810, 18340039
-
Butler J, MacCallum I, Kleber M, Shlyakhter IA, Belmonte MK, Lander ES, Nusbaum C, Jaffe DB. ALLPATHS de novo assembly of whole-genome shotgun microreads. Genome Res 2008, 18(5):810-820. 10.1101/gr.7337908, 2336810, 18340039.
-
(2008)
Genome Res
, vol.18
, Issue.5
, pp. 810-820
-
-
Butler, J.1
MacCallum, I.2
Kleber, M.3
Shlyakhter, I.A.4
Belmonte, M.K.5
Lander, E.S.6
Nusbaum, C.7
Jaffe, D.B.8
-
42
-
-
75649124547
-
De novo assembly of human genomes with massively parallel short read sequencing
-
10.1101/gr.097261.109, 2813482, 20019144
-
Li R, Zhu H, Ruan J, Qian W, Fang X, Shi Z, Li Y, Li S, Shan G, Kristiansen K, et al. De novo assembly of human genomes with massively parallel short read sequencing. Genome Res 2010, 20(2):265-272. 10.1101/gr.097261.109, 2813482, 20019144.
-
(2010)
Genome Res
, vol.20
, Issue.2
, pp. 265-272
-
-
Li, R.1
Zhu, H.2
Ruan, J.3
Qian, W.4
Fang, X.5
Shi, Z.6
Li, Y.7
Li, S.8
Shan, G.9
Kristiansen, K.10
-
43
-
-
68749107979
-
Deep sequencing of the zebrafish transcriptome response to mycobacterium infection
-
10.1016/j.molimm.2009.07.002, 19631987
-
Hegedus Z, Zakrzewska A, Agoston VC, Ordas A, Racz P, Mink M, Spaink HP, Meijer AH. Deep sequencing of the zebrafish transcriptome response to mycobacterium infection. Mol Immunol 2009, 46(15):2918-2930. 10.1016/j.molimm.2009.07.002, 19631987.
-
(2009)
Mol Immunol
, vol.46
, Issue.15
, pp. 2918-2930
-
-
Hegedus, Z.1
Zakrzewska, A.2
Agoston, V.C.3
Ordas, A.4
Racz, P.5
Mink, M.6
Spaink, H.P.7
Meijer, A.H.8
-
44
-
-
77956107299
-
Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing
-
10.1093/nar/gkq256, 2926611, 20392818
-
Wang B, Guo G, Wang C, Lin Y, Wang X, Zhao M, Guo Y, He M, Zhang Y, Pan L. Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing. Nucleic Acids Res 2010, 38(15):5075-5087. 10.1093/nar/gkq256, 2926611, 20392818.
-
(2010)
Nucleic Acids Res
, vol.38
, Issue.15
, pp. 5075-5087
-
-
Wang, B.1
Guo, G.2
Wang, C.3
Lin, Y.4
Wang, X.5
Zhao, M.6
Guo, Y.7
He, M.8
Zhang, Y.9
Pan, L.10
-
45
-
-
75149155568
-
The sequence and de novo assembly of the giant panda genome
-
10.1038/nature08696, 20010809
-
Li R, Fan W, Tian G, Zhu H, He L, Cai J, Huang Q, Cai Q, Li B, Bai Y, et al. The sequence and de novo assembly of the giant panda genome. Nature 2010, 463(7279):311-317. 10.1038/nature08696, 20010809.
-
(2010)
Nature
, vol.463
, Issue.7279
, pp. 311-317
-
-
Li, R.1
Fan, W.2
Tian, G.3
Zhu, H.4
He, L.5
Cai, J.6
Huang, Q.7
Cai, Q.8
Li, B.9
Bai, Y.10
-
46
-
-
77954450225
-
De novo characterization of a whitefly transcriptome and analysis of its gene expression during development
-
10.1186/1471-2164-11-400, 2898760, 20573269
-
Wang X-W, Luan J-B, Li J-M, Bao Y-Y, Zhang C-X, Liu S-S. De novo characterization of a whitefly transcriptome and analysis of its gene expression during development. BMC Genomics 2010, 11(1):400. 10.1186/1471-2164-11-400, 2898760, 20573269.
-
(2010)
BMC Genomics
, vol.11
, Issue.1
, pp. 400
-
-
Wang, X.-W.1
Luan, J.-B.2
Li, J.-M.3
Bao, Y.-Y.4
Zhang, C.-X.5
Liu, S.-S.6
-
47
-
-
77953153394
-
Transcriptome profile analysis of floral sex determination in cucumber
-
10.1016/j.jplph.2010.02.004, 20303197
-
Wu T, Qin Z, Zhou X, Feng Z, Du Y. Transcriptome profile analysis of floral sex determination in cucumber. J Plant Physiol 2010, 167(11):905-913. 10.1016/j.jplph.2010.02.004, 20303197.
-
(2010)
J Plant Physiol
, vol.167
, Issue.11
, pp. 905-913
-
-
Wu, T.1
Qin, Z.2
Zhou, X.3
Feng, Z.4
Du, Y.5
-
48
-
-
0033290515
-
ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences
-
Iseli C, Jongeneel CV, Bucher P. ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences. Proc Int Conf Intell Syst Mol Biol 1999, 138-148.
-
(1999)
Proc Int Conf Intell Syst Mol Biol
, pp. 138-148
-
-
Iseli, C.1
Jongeneel, C.V.2
Bucher, P.3
-
49
-
-
77649112643
-
Development of a EST dataset and characterization of EST-SSRs in a traditional Chinese medicinal plant, Epimedium sagittatum (Sieb. Et Zucc.) Maxim
-
10.1186/1471-2164-11-94, 2829513, 20141623
-
Zeng S, Xiao G, Guo J, Fei Z, Xu Y, Roe B, Wang Y. Development of a EST dataset and characterization of EST-SSRs in a traditional Chinese medicinal plant, Epimedium sagittatum (Sieb. Et Zucc.) Maxim. BMC Genomics 2010, 11(1):94. 10.1186/1471-2164-11-94, 2829513, 20141623.
-
(2010)
BMC Genomics
, vol.11
, Issue.1
, pp. 94
-
-
Zeng, S.1
Xiao, G.2
Guo, J.3
Fei, Z.4
Xu, Y.5
Roe, B.6
Wang, Y.7
-
50
-
-
0344287166
-
Comparative analysis of expressed sequence tags from Sesamum indicum and Arabidopsis thaliana developing seeds
-
Chung Suh M, Jung Kim M, Hur C-G, Myung Bae J, In Park Y, Chung C-H, Kang C-W, Ohlrogge JB. Comparative analysis of expressed sequence tags from Sesamum indicum and Arabidopsis thaliana developing seeds. Plant Mol Biol 2003, 52(6):1107-1123.
-
(2003)
Plant Mol Biol
, vol.52
, Issue.6
, pp. 1107-1123
-
-
Chung Suh, M.1
Jung Kim, M.2
Hur, C.-G.3
Myung Bae, J.4
In Park, Y.5
Chung, C.-H.6
Kang, C.-W.7
Ohlrogge, J.B.8
-
51
-
-
41149167170
-
Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing
-
10.1111/j.1365-294X.2008.03666.x, 18266620
-
Vera JC, Wheat CW, Fescemyer HW, Frilander MJ, Crawford DL, Hanski I, Marden JH. Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing. Mol Ecol 2008, 17(7):1636-1647. 10.1111/j.1365-294X.2008.03666.x, 18266620.
-
(2008)
Mol Ecol
, vol.17
, Issue.7
, pp. 1636-1647
-
-
Vera, J.C.1
Wheat, C.W.2
Fescemyer, H.W.3
Frilander, M.J.4
Crawford, D.L.5
Hanski, I.6
Marden, J.H.7
-
52
-
-
78650502725
-
De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)
-
10.1186/1471-2164-11-726, 3016421, 21182800
-
Wang Z, Fang B, Chen J, Zhang X, Luo Z, Huang L, Chen X, Li Y. De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas). BMC Genomics 2010, 11(1):726. 10.1186/1471-2164-11-726, 3016421, 21182800.
-
(2010)
BMC Genomics
, vol.11
, Issue.1
, pp. 726
-
-
Wang, Z.1
Fang, B.2
Chen, J.3
Zhang, X.4
Luo, Z.5
Huang, L.6
Chen, X.7
Li, Y.8
-
53
-
-
66749182204
-
Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx
-
10.1186/1471-2164-10-219, 2689275, 19435504
-
Meyer E, Aglyamova GV, Wang S, Buchanan-Carter J, Abrego D, Colbourne JK, Willis BL, Matz MV. Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx. BMC Genomics 2009, 10:219. 10.1186/1471-2164-10-219, 2689275, 19435504.
-
(2009)
BMC Genomics
, vol.10
, pp. 219
-
-
Meyer, E.1
Aglyamova, G.V.2
Wang, S.3
Buchanan-Carter, J.4
Abrego, D.5
Colbourne, J.K.6
Willis, B.L.7
Matz, M.V.8
-
54
-
-
46149084000
-
Relationship between metabolic and genomic diversity in sesame (Sesamum indicum L.)
-
10.1186/1471-2164-9-250, 2440766, 18510719
-
Laurentin H, Ratzinger A, Karlovsky P. Relationship between metabolic and genomic diversity in sesame (Sesamum indicum L.). BMC Genomics 2008, 9(1):250. 10.1186/1471-2164-9-250, 2440766, 18510719.
-
(2008)
BMC Genomics
, vol.9
, Issue.1
, pp. 250
-
-
Laurentin, H.1
Ratzinger, A.2
Karlovsky, P.3
-
55
-
-
0036302486
-
Genetic relationships of sesame germplasm collection as revealed by inter-simple sequence repeats
-
Kim DH, Zur G, Danin-Poleg Y, Lee SW, Shim KB, Kang CW, Kashi Y. Genetic relationships of sesame germplasm collection as revealed by inter-simple sequence repeats. Plant Breed 2002, 121(3):259-262.
-
(2002)
Plant Breed
, vol.121
, Issue.3
, pp. 259-262
-
-
Kim, D.H.1
Zur, G.2
Danin-Poleg, Y.3
Lee, S.W.4
Shim, K.B.5
Kang, C.W.6
Kashi, Y.7
-
56
-
-
0031853469
-
Diversity in Indian sesame collection and stratification of germplasm accessions in different diversity groups
-
Bisht IS, Mahajan RK, Loknathan TR, Agrawal RC. Diversity in Indian sesame collection and stratification of germplasm accessions in different diversity groups. Genet Resour Crop Ev 1998, 45(4):325-335.
-
(1998)
Genet Resour Crop Ev
, vol.45
, Issue.4
, pp. 325-335
-
-
Bisht, I.S.1
Mahajan, R.K.2
Loknathan, T.R.3
Agrawal, R.C.4
-
57
-
-
33645754932
-
Mining and survey of simple sequence repeats in expressed sequence tags of dicotyledonous species
-
10.1139/g05-060, 16391668
-
Kumpatla SP, Mukhopadhyay S. Mining and survey of simple sequence repeats in expressed sequence tags of dicotyledonous species. Genome 2005, 48(6):985-998. 10.1139/g05-060, 16391668.
-
(2005)
Genome
, vol.48
, Issue.6
, pp. 985-998
-
-
Kumpatla, S.P.1
Mukhopadhyay, S.2
-
58
-
-
0033858199
-
Microsatellites in different eukaryotic genomes: survey and analysis
-
10.1101/gr.10.7.967, 310925, 10899146
-
Toth G, Gaspari Z, Jurka J. Microsatellites in different eukaryotic genomes: survey and analysis. Genome Res 2000, 10(7):967-981. 10.1101/gr.10.7.967, 310925, 10899146.
-
(2000)
Genome Res
, vol.10
, Issue.7
, pp. 967-981
-
-
Toth, G.1
Gaspari, Z.2
Jurka, J.3
-
59
-
-
25444467752
-
Nonrandom distribution and frequencies of genomic and EST-derived microsatellite markers in rice, wheat, and barley
-
10.1186/1471-2164-6-23, 550658, 15720707
-
La Rota M, Kantety R, Yu J-K, Sorrells M. Nonrandom distribution and frequencies of genomic and EST-derived microsatellite markers in rice, wheat, and barley. BMC Genomics 2005, 6(1):23. 10.1186/1471-2164-6-23, 550658, 15720707.
-
(2005)
BMC Genomics
, vol.6
, Issue.1
, pp. 23
-
-
La Rota, M.1
Kantety, R.2
Yu, J.-K.3
Sorrells, M.4
-
60
-
-
0036478903
-
Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes
-
10.1038/ng822, 11799393
-
Morgante M, Hanafey M, Powell W. Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes. Nat Genet 2002, 30(2):194-200. 10.1038/ng822, 11799393.
-
(2002)
Nat Genet
, vol.30
, Issue.2
, pp. 194-200
-
-
Morgante, M.1
Hanafey, M.2
Powell, W.3
-
61
-
-
0036010770
-
Data mining for simple sequence repeats in expressed sequence tags from barley, maize, rice, sorghum and wheat
-
10.1023/A:1014875206165, 11999831
-
Kantety RV, La Rota M, Matthews DE, Sorrells ME. Data mining for simple sequence repeats in expressed sequence tags from barley, maize, rice, sorghum and wheat. Plant Mol Biol 2002, 48:501-510. 10.1023/A:1014875206165, 11999831.
-
(2002)
Plant Mol Biol
, vol.48
, pp. 501-510
-
-
Kantety, R.V.1
La Rota, M.2
Matthews, D.E.3
Sorrells, M.E.4
-
62
-
-
0035839055
-
DNA methylation and epigenetic inheritance in plants and filamentous fungi
-
10.1126/science.293.5532.1070, 11498574
-
Martienssen RA, Colot V. DNA methylation and epigenetic inheritance in plants and filamentous fungi. Science 2001, 293(5532):1070-1074. 10.1126/science.293.5532.1070, 11498574.
-
(2001)
Science
, vol.293
, Issue.5532
, pp. 1070-1074
-
-
Martienssen, R.A.1
Colot, V.2
-
63
-
-
4544324342
-
Tall fescue EST-SSR markers with transferability across several grass species
-
10.1007/s00122-004-1681-1, 15205737
-
Saha M, Mian M, Eujayl I, Zwonitzer J, Wang L, May G. Tall fescue EST-SSR markers with transferability across several grass species. Theor Appl Genet 2004, 109(4):783-791. 10.1007/s00122-004-1681-1, 15205737.
-
(2004)
Theor Appl Genet
, vol.109
, Issue.4
, pp. 783-791
-
-
Saha, M.1
Mian, M.2
Eujayl, I.3
Zwonitzer, J.4
Wang, L.5
May, G.6
-
64
-
-
11344276529
-
Genic microsatellite markers in plants: features and applications
-
10.1016/j.tibtech.2004.11.005, 15629858
-
Varshney RK, Graner A, Sorrells ME. Genic microsatellite markers in plants: features and applications. Trends Biotechnol 2005, 23(1):48-55. 10.1016/j.tibtech.2004.11.005, 15629858.
-
(2005)
Trends Biotechnol
, vol.23
, Issue.1
, pp. 48-55
-
-
Varshney, R.K.1
Graner, A.2
Sorrells, M.E.3
-
65
-
-
24644503098
-
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
-
10.1093/bioinformatics/bti610, 16081474
-
Conesa A, Gotz S, Garcia-Gomez JM, Terol J, Talon M, Robles M. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 2005, 21(18):3674-3676. 10.1093/bioinformatics/bti610, 16081474.
-
(2005)
Bioinformatics
, vol.21
, Issue.18
, pp. 3674-3676
-
-
Conesa, A.1
Gotz, S.2
Garcia-Gomez, J.M.3
Terol, J.4
Talon, M.5
Robles, M.6
-
66
-
-
33747846582
-
WEGO: a web tool for plotting GO annotations
-
10.1093/nar/gkl031, 1538768, 16845012
-
Ye J, Fang L, Zheng H, Zhang Y, Chen J, Zhang Z, Wang J, Li S, Li R, Bolund L. WEGO: a web tool for plotting GO annotations. Nucleic Acids Res 2006, 34(Web Server):W293-297. 10.1093/nar/gkl031, 1538768, 16845012.
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.WEB SERVER
-
-
Ye, J.1
Fang, L.2
Zheng, H.3
Zhang, Y.4
Chen, J.5
Zhang, Z.6
Wang, J.7
Li, S.8
Li, R.9
Bolund, L.10
-
67
-
-
0033982936
-
KEGG: kyoto encyclopedia of genes and genomes
-
10.1093/nar/28.1.27, 102409, 10592173
-
Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res 2000, 28(1):27-30. 10.1093/nar/28.1.27, 102409, 10592173.
-
(2000)
Nucleic Acids Res
, vol.28
, Issue.1
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
68
-
-
0026029034
-
Amino acid and cDNA sequences of a methionine-rich 2S protein from sunflower seed (Helianthus annuus L.)
-
10.1111/j.1432-1033.1991.tb15710.x, 1997318
-
Kortt AA, Caldwell JB, Lilley GG, Higgins TJV. Amino acid and cDNA sequences of a methionine-rich 2S protein from sunflower seed (Helianthus annuus L.). Eur J Biochem 1991, 195(2):329-334. 10.1111/j.1432-1033.1991.tb15710.x, 1997318.
-
(1991)
Eur J Biochem
, vol.195
, Issue.2
, pp. 329-334
-
-
Kortt, A.A.1
Caldwell, J.B.2
Lilley, G.G.3
Higgins, T.J.V.4
-
69
-
-
0031526548
-
Modification of a CTAB DNA extraction protocol for plants containing high polysaccharide and polyphenol components
-
Porebski S, Bailey L, Baum B. Modification of a CTAB DNA extraction protocol for plants containing high polysaccharide and polyphenol components. Plant Mol Biol Rep 1997, 15(1):8-15.
-
(1997)
Plant Mol Biol Rep
, vol.15
, Issue.1
, pp. 8-15
-
-
Porebski, S.1
Bailey, L.2
Baum, B.3
-
70
-
-
0025835296
-
Fast and sensitive silver staining of DNA in polyacrylamide gels
-
10.1016/0003-2697(91)90120-I, 1716076
-
Bassam BJ, Caetano-Anolles G, Gresshoff PM. Fast and sensitive silver staining of DNA in polyacrylamide gels. Anal Biochem 1991, 196(1):80-83. 10.1016/0003-2697(91)90120-I, 1716076.
-
(1991)
Anal Biochem
, vol.196
, Issue.1
, pp. 80-83
-
-
Bassam, B.J.1
Caetano-Anolles, G.2
Gresshoff, P.M.3
-
71
-
-
0003377384
-
Population genetic analysis of co-dominant and dominant markers and quantitative traits
-
Yeh FC, Boyle TJB. Population genetic analysis of co-dominant and dominant markers and quantitative traits. Belg J Bot 1997, 129:157.
-
(1997)
Belg J Bot
, vol.129
, pp. 157
-
-
Yeh, F.C.1
Boyle, T.J.B.2
-
72
-
-
33644871292
-
GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research
-
Peakall ROD, Smouse PE. GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 2006, 6(1):288-295.
-
(2006)
Mol Ecol Notes
, vol.6
, Issue.1
, pp. 288-295
-
-
Peakall, R.O.D.1
Smouse, P.E.2
|