-
1
-
-
84879673534
-
A genome-wide, fine-scale map of natural pigmentation variation in Drosophila melanogaster
-
Bastide H, Betancourt A, Nolte V, Tobler R, Stöbe P, Futschik A, Schlötterer C. 2013. A genome-wide, fine-scale map of natural pigmentation variation in Drosophila melanogaster. PLoS Genet. 9: e1003534.
-
(2013)
PLoS Genet.
, vol.9
-
-
Bastide, H.1
Betancourt, A.2
Nolte, V.3
Tobler, R.4
Stöbe, P.5
Futschik, A.6
Schlötterer, C.7
-
2
-
-
84869131230
-
How does adaptation sweep through the genome? Insights from long-term selection experiments
-
Burke MK. 2012. How does adaptation sweep through the genome? Insights from long-term selection experiments. Proc Biol Sci. 279: 5029-5038.
-
(2012)
Proc Biol Sci.
, vol.279
, pp. 5029-5038
-
-
Burke, M.K.1
-
3
-
-
77957346489
-
Genome-wide analysis of a long-term evolution experiment with Drosophila
-
Burke MK, Dunham JP, Shahrestani P, Thornton KR, Rose MR, Long AD. 2010. Genome-wide analysis of a long-term evolution experiment with Drosophila. Nature 467:587-590.
-
(2010)
Nature
, vol.467
, pp. 587-590
-
-
Burke, M.K.1
Dunham, J.P.2
Shahrestani, P.3
Thornton, K.R.4
Rose, M.R.5
Long, A.D.6
-
4
-
-
84867554607
-
What paths do advantageous alleles take during short-term evolutionary change?
-
Burke MK, Long AD. 2012. What paths do advantageous alleles take during short-term evolutionary change? Mol Ecol. 21:4913-4916.
-
(2012)
Mol Ecol.
, vol.21
, pp. 4913-4916
-
-
Burke, M.K.1
Long, A.D.2
-
5
-
-
59449107920
-
Selective sweep at a quantitative trait locus in the presence of background genetic variation
-
Chevin LM, Hospital F. 2008. Selective sweep at a quantitative trait locus in the presence of background genetic variation. Genetics 180: 1645-1660.
-
(2008)
Genetics
, vol.180
, pp. 1645-1660
-
-
Chevin, L.M.1
Hospital, F.2
-
6
-
-
52649157765
-
Substantial biases in ultra-short read data sets from high-throughput DNA sequencing
-
Dohm JC, Lottaz C, Borodina T, Himmelbauer H. 2008. Substantial biases in ultra-short read data sets from high-throughput DNA sequencing. Nucleic Acids Res. 36:e105.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Dohm, J.C.1
Lottaz, C.2
Borodina, T.3
Himmelbauer, H.4
-
7
-
-
79954469204
-
Fastsimcoal: A continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios
-
Excoffier L, Foll M. 2011. fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios. Bioinformatics 27:1332-1334.
-
(2011)
Bioinformatics
, vol.27
, pp. 1332-1334
-
-
Excoffier, L.1
Foll, M.2
-
9
-
-
78751665708
-
The next generation of molecular markers from massively parallel sequencing of pooled DNA samples
-
Futschik A, Schlötterer C. 2010. The next generation of molecular markers from massively parallel sequencing of pooled DNA samples. Genetics 186:207-218.
-
(2010)
Genetics
, vol.186
, pp. 207-218
-
-
Futschik, A.1
Schlötterer, C.2
-
12
-
-
84955349191
-
A mathematical theory of natural and artificial selection, part V: Selection and mutation
-
Haldane JBS. 1927. A mathematical theory of natural and artificial selection, part V: selection and mutation. Proceedings of the Cambridge Philosophical Society, Vol. 23. p. 838-844.
-
(1927)
Proceedings of the Cambridge Philosophical Society
, vol.23
, pp. 838-844
-
-
Haldane, J.B.S.1
-
13
-
-
0003684449
-
The elements of statistical learning: Data mining, inference, and prediction
-
New York: Springer- Verlag
-
Hastie T, Tibshirani R, Friedman J. 2009. The elements of statistical learning: data mining, inference, and prediction. Springer series in statistics. New York: Springer-Verlag.
-
(2009)
Springer Series in Statistics
-
-
Hastie, T.1
Tibshirani, R.2
Friedman, J.3
-
14
-
-
18844439645
-
Soft sweeps: Molecular population genetics of adaptation from standing genetic variation
-
Hermisson J, Pennings PS. 2005. Soft sweeps: molecular population genetics of adaptation from standing genetic variation. Genetics 169:2335-2352.
-
(2005)
Genetics
, vol.169
, pp. 2335-2352
-
-
Hermisson, J.1
Pennings, P.S.2
-
15
-
-
84866848293
-
Epistasis dominates the genetic architecture of Drosophila quantitative traits
-
(25 co-authors).
-
HuangW, Richards S, Carbone MA, et al. (25 co-authors). 2012. Epistasis dominates the genetic architecture of Drosophila quantitative traits. Proc Natl Acad Sci USA. 109:15553-15559.
-
(2012)
Proc Natl Acad Sci USA.
, vol.109
, pp. 15553-15559
-
-
Huangw Richards, S.1
Carbone, M.A.2
-
16
-
-
84858419168
-
Quantifying selection acting on a complex trait using allele frequency time series data
-
Illingworth CJR, Parts L, Schiffels S, Liti G, Mustonen V. 2012. Quantifying selection acting on a complex trait using allele frequency time series data. Mol Biol Evol. 29:1187-1197.
-
(2012)
Mol Biol Evol.
, vol.29
, pp. 1187-1197
-
-
Illingworth, C.J.R.1
Parts, L.2
Schiffels, S.3
Liti, G.4
Mustonen, V.5
-
17
-
-
0035970061
-
Fitness effects of advantageous mutations in evolving Escherichia coli populations
-
Imhof M, Schlötterer C. 2001. Fitness effects of advantageous mutations in evolving Escherichia coli populations. Proc Natl Acad Sci USA. 98: 1113-1117.
-
(2001)
Proc Natl Acad Sci USA.
, vol.98
, pp. 1113-1117
-
-
Imhof, M.1
Schlötterer, C.2
-
18
-
-
33645394597
-
Distribution of fitness effects among beneficial mutations before selection in experimental populations of bacteria
-
Kassen R, Bataillon T. 2006. Distribution of fitness effects among beneficial mutations before selection in experimental populations of bacteria. Nat Genet. 38:484-8.
-
(2006)
Nat Genet.
, vol.38
, pp. 484-488
-
-
Kassen, R.1
Bataillon, T.2
-
19
-
-
84865866440
-
Experimental evolution
-
Kawecki TJ, Lenski RE, Ebert D, Hollis B, Olivieri I, Whitlock MC. 2012. Experimental evolution. Trends Ecol Evol. 27:547-560.
-
(2012)
Trends Ecol Evol.
, vol.27
, pp. 547-560
-
-
Kawecki, T.J.1
Lenski, R.E.2
Ebert, D.3
Hollis, B.4
Olivieri, I.5
Whitlock, M.C.6
-
20
-
-
0001017871
-
Solution of a process of random genetic drift with a continuous model
-
Kimura M. 1955. Solution of a process of random genetic drift with a continuous model. Proc Natl Acad Sci USA. 41: 144-150.
-
(1955)
Proc Natl Acad Sci USA.
, vol.41
, pp. 144-150
-
-
Kimura, M.1
-
21
-
-
0000800333
-
On the probability of fixation of mutant genes in a population
-
Kimura M. 1962. On the probability of fixation of mutant genes in a population. Genetics 47:713-719.
-
(1962)
Genetics
, vol.47
, pp. 713-719
-
-
Kimura, M.1
-
22
-
-
79251557454
-
Popoolation: A toolbox for population genetic analysis of next generation sequencing data from pooled individuals
-
Kofler R, Orozco-terWengel P, DeMaio N, Pandey RV, Nolte V, Futschik A, Kosiol C, Schlötterer C. 2011. Popoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals. PLoS One 6:e15925.
-
(2011)
PLoS One
, vol.6
-
-
Kofler, R.1
Orozco-Terwengel, P.2
Demaio, N.3
Pandey, R.V.4
Nolte, V.5
Futschik, A.6
Kosiol, C.7
Schlötterer, C.8
-
23
-
-
83355175374
-
Popoolation2: Identifying differentiation between populations using sequencing of pooled dna samples (pool-seq)
-
Kofler R, Pandey RV, Schlötterer C. 2011. Popoolation2: identifying differentiation between populations using sequencing of pooled dna samples (pool-seq). Bioinformatics 27:3435-6.
-
(2011)
Bioinformatics
, vol.27
, pp. 3435-3436
-
-
Kofler, R.1
Pandey, R.V.2
Schlötterer, C.3
-
24
-
-
0001194272
-
Average partial association in three-way contingency tables: A review and discussion of alternative tests
-
Landis JR, Heyman ER, Koch GG. 1978. Average partial association in three-way contingency tables: a review and discussion of alternative tests. Int Stat Rev. 46:237-254.
-
(1978)
Int Stat Rev.
, vol.46
, pp. 237-254
-
-
Landis, J.R.1
Heyman, E.R.2
Koch, G.G.3
-
25
-
-
0024370623
-
Analyzing a portion of the ROC curve
-
McClish DK. 1989. Analyzing a portion of the ROC curve. Med Decis Making. 9:190-195.
-
(1989)
Med Decis Making.
, vol.9
, pp. 190-195
-
-
McClish, D.K.1
-
26
-
-
80455126001
-
Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and genome analyzer systems
-
Minoche AE, Dohm JC, Himmelbauer H. 2011. Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and genome analyzer systems. Genome Biol. 12:R112.
-
(2011)
Genome Biol.
, vol.12
-
-
Minoche, A.E.1
Dohm, J.C.2
Himmelbauer, H.3
-
27
-
-
84867574655
-
Adaptation of Drosophila to a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles
-
Orozco-terWengel P, Kapun M, Nolte V, Kofler R, Flatt T, Schlötterer C. 2012. Adaptation of Drosophila to a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles. Mol Ecol. 21:4931-4941.
-
(2012)
Mol Ecol.
, vol.21
, pp. 4931-4941
-
-
Orozco-Terwengel, P.1
Kapun, M.2
Nolte, V.3
Kofler, R.4
Flatt, T.5
Schlötterer, C.6
-
28
-
-
79956073707
-
Revealing the genetic structure of a trait by sequencing a population under selection
-
(14 co-authors)
-
Parts L, Cubillos FA, Warringer J, et al. (14 co-authors). 2011. Revealing the genetic structure of a trait by sequencing a population under selection. Genome Res. 21:1131-8.
-
(2011)
Genome Res.
, vol.21
, pp. 1131-1138
-
-
Parts, L.1
Cubillos, F.A.2
Warringer, J.3
-
29
-
-
28644440530
-
The signature of positive selection on standing genetic variation
-
Przeworski M, Coop G, Wall JD. 2005. The signature of positive selection on standing genetic variation. Evolution 59:2312-2323.
-
(2005)
Evolution
, vol.59
, pp. 2312-2323
-
-
Przeworski, M.1
Coop, G.2
Wall, J.D.3
-
30
-
-
84863304598
-
-
R Core Team Vienna (Austria): R Foundation for Statistical Computing
-
R Core Team. 2012. R: a language and environment for statistical computing. Vienna (Austria): R Foundation for Statistical Computing.
-
(2012)
R: A Language and Environment for Statistical Computing
-
-
-
31
-
-
84868134353
-
Genomic basis of aging and life-history evolution in Drosophila melanogaster
-
Remolina SC, Chang PL, Leips J, Nuzhdin SV, Hughes KA. 2012. Genomic basis of aging and life-history evolution in Drosophila melanogaster. Evolution 66:3390-3403.
-
(2012)
Evolution
, vol.66
, pp. 3390-3403
-
-
Remolina, S.C.1
Chang, P.L.2
Leips, J.3
Nuzhdin, S.V.4
Hughes, K.A.5
-
32
-
-
0021549310
-
Artificial selection on a fitness-component in Drosophila melanogaster
-
Rose MR. 1984. Artificial selection on a fitness-component in Drosophila melanogaster. Evolution 38:516-526.
-
(1984)
Evolution
, vol.38
, pp. 516-526
-
-
Rose, M.R.1
-
33
-
-
79955931968
-
New experiments for an undivided genetics
-
Rose MR, Mueller LD, Burke MK. 2011. New experiments for an undivided genetics. Genetics 188:1-10.
-
(2011)
Genetics
, vol.188
, pp. 1-10
-
-
Rose, M.R.1
Mueller, L.D.2
Burke, M.K.3
-
35
-
-
0024385165
-
On the statistical analysis of ROC curves
-
Thompson ML, Zucchini W. 1989. On the statistical analysis of ROC curves. Stat Med. 8:1277-1290.
-
(1989)
Stat Med.
, vol.8
, pp. 1277-1290
-
-
Thompson, M.L.1
Zucchini, W.2
-
36
-
-
84893147360
-
Massive habitatspecific genomic response in D melanogaster populations during experimental evolution in hot and cold environments
-
Forthcoming Advance Access published October 22, 2013 doi: 10.1093/molbev/mst205
-
Tobler R, Franssen SU, Kofler R, Orozco-terWengel P, Nolte V, Hermisson J, Schlötterer C. Forthcoming 2013. Massive habitatspecific genomic response in D. melanogaster populations during experimental evolution in hot and cold environments. Mol Biol Evol. Advance Access published October 22, 2013, doi: 10.1093/molbev/mst205.
-
(2013)
Mol Biol Evol.
-
-
Tobler, R.1
Franssen, S.U.2
Kofler, R.3
Orozco-Terwengel, P.4
Nolte, V.5
Hermisson, J.6
Schlötterer, C.7
-
37
-
-
84862564386
-
Investigating natural variation in Drosophila courtship song by the evolve & resequence approach
-
Turner TL, Miller PM. 2012. Investigating natural variation in Drosophila courtship song by the evolve & resequence approach. Genetics 191: 633-642.
-
(2012)
Genetics
, vol.191
, pp. 633-642
-
-
Turner, T.L.1
Miller, P.M.2
-
38
-
-
79953735688
-
Population-based resequencing of experimentally evolved populations reveals the genetic basis of body size variation in Drosophila melanogaster
-
Turner TL, Stewart AD, Fields AT, Rice WR, Tarone AM. 2011. Population-based resequencing of experimentally evolved populations reveals the genetic basis of body size variation in Drosophila melanogaster. PLoS Genet. 7:e1001336.
-
(2011)
PLoS Genet.
, vol.7
-
-
Turner, T.L.1
Stewart, A.D.2
Fields, A.T.3
Rice, W.R.4
Tarone, A.M.5
|