메뉴 건너뛰기




Volumn 9, Issue 6, 2013, Pages

A Genome-Wide, Fine-Scale Map of Natural Pigmentation Variation in Drosophila melanogaster

Author keywords

[No Author keywords available]

Indexed keywords

CIS ACTING ELEMENT; GENOMIC DNA;

EID: 84879673534     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1003534     Document Type: Article
Times cited : (122)

References (62)
  • 1
    • 77954319020 scopus 로고    scopus 로고
    • Sequencing of 50 human exomes reveals adaptation to high altitude
    • Yi X, Liang Y, Huerta-Sanchez E, Jin X, Cuo ZX, et al. (2010) Sequencing of 50 human exomes reveals adaptation to high altitude. Science 329: 75-78.
    • (2010) Science , vol.329 , pp. 75-78
    • Yi, X.1    Liang, Y.2    Huerta-Sanchez, E.3    Jin, X.4    Cuo, Z.X.5
  • 3
    • 78049332150 scopus 로고    scopus 로고
    • Genome-wide association studies of 14 agronomic traits in rice landraces
    • Huang X, Wei X, Sang T, Zhao Q, Feng Q, et al. (2010) Genome-wide association studies of 14 agronomic traits in rice landraces. Nat Genet 42: 961-967.
    • (2010) Nat Genet , vol.42 , pp. 961-967
    • Huang, X.1    Wei, X.2    Sang, T.3    Zhao, Q.4    Feng, Q.5
  • 7
    • 0242410091 scopus 로고    scopus 로고
    • Insect melanism: the molecules matter
    • True JR, (2003) Insect melanism: the molecules matter. Trends in Ecology & Evolution 18: 640-647.
    • (2003) Trends in Ecology & Evolution , vol.18 , pp. 640-647
    • True, J.R.1
  • 8
    • 0042830302 scopus 로고    scopus 로고
    • Evolution in black and white: genetic control of pigment patterns in Drosophila
    • Wittkopp PJ, Carroll SB, Kopp A, (2003) Evolution in black and white: genetic control of pigment patterns in Drosophila. Trends Genet 19: 495-504.
    • (2003) Trends Genet , vol.19 , pp. 495-504
    • Wittkopp, P.J.1    Carroll, S.B.2    Kopp, A.3
  • 9
    • 34250762535 scopus 로고    scopus 로고
    • The stars and stripes of animal bodies: evolution of regulatory elements mediating pigment and bristle patterns in Drosophila
    • Simpson P, (2007) The stars and stripes of animal bodies: evolution of regulatory elements mediating pigment and bristle patterns in Drosophila. Trends Genet 23: 350-358.
    • (2007) Trends Genet , vol.23 , pp. 350-358
    • Simpson, P.1
  • 10
    • 62149133491 scopus 로고    scopus 로고
    • Development and evolution of insect pigmentation: genetic mechanisms and the potential consequences of pleiotropy
    • Wittkopp PJ, Beldade P, (2009) Development and evolution of insect pigmentation: genetic mechanisms and the potential consequences of pleiotropy. Semin Cell Dev Biol 20: 65-71.
    • (2009) Semin Cell Dev Biol , vol.20 , pp. 65-71
    • Wittkopp, P.J.1    Beldade, P.2
  • 11
    • 0017337442 scopus 로고
    • Variation in abdomen pigmentation in Drosophila melanogaster females
    • Robertson A, Briscoe DA, Louw JH, (1977) Variation in abdomen pigmentation in Drosophila melanogaster females. Genetica 47: 73-76.
    • (1977) Genetica , vol.47 , pp. 73-76
    • Robertson, A.1    Briscoe, D.A.2    Louw, J.H.3
  • 12
    • 84993843436 scopus 로고
    • Abdominal pigmentation and growth temperature in Drosophila melanogaster: Similarities and differences in the norms of reaction of successive segments
    • David JR, Capy P, Gauthier JP, (1990) Abdominal pigmentation and growth temperature in Drosophila melanogaster: Similarities and differences in the norms of reaction of successive segments. J Evol Biol 3: 429-445.
    • (1990) J Evol Biol , vol.3 , pp. 429-445
    • David, J.R.1    Capy, P.2    Gauthier, J.P.3
  • 13
    • 0034617867 scopus 로고    scopus 로고
    • Evolutionary novelties in islands: Drosophila santomea, a new melanogaster sister species from Sao Tome
    • Lachaise D, Harry M, Solignac M, Lemeunier F, Benassi V, et al. (2000) Evolutionary novelties in islands: Drosophila santomea, a new melanogaster sister species from Sao Tome. Proc Biol Sci 267: 1487-1495.
    • (2000) Proc Biol Sci , vol.267 , pp. 1487-1495
    • Lachaise, D.1    Harry, M.2    Solignac, M.3    Lemeunier, F.4    Benassi, V.5
  • 14
    • 33847307604 scopus 로고    scopus 로고
    • Phenotypic plasticity in Drosophila pigmentation caused by temperature sensitivity of a chromatin regulator network
    • Gibert JM, Peronnet F, Schlötterer C, (2007) Phenotypic plasticity in Drosophila pigmentation caused by temperature sensitivity of a chromatin regulator network. PLoS Genet 3: e30.
    • (2007) PLoS Genet , vol.3
    • Gibert, J.M.1    Peronnet, F.2    Schlötterer, C.3
  • 15
    • 39749184167 scopus 로고    scopus 로고
    • The evolution of gene regulation underlies a morphological difference between two Drosophila sister species
    • Jeong S, Rebeiz M, Andolfatto P, Werner T, True J, et al. (2008) The evolution of gene regulation underlies a morphological difference between two Drosophila sister species. Cell 132: 783-793.
    • (2008) Cell , vol.132 , pp. 783-793
    • Jeong, S.1    Rebeiz, M.2    Andolfatto, P.3    Werner, T.4    True, J.5
  • 16
    • 0034735810 scopus 로고    scopus 로고
    • Genetic control and evolution of sexually dimorphic characters in Drosophila
    • Kopp A, Duncan I, Godt D, Carroll SB, (2000) Genetic control and evolution of sexually dimorphic characters in Drosophila. Nature 408: 553-559.
    • (2000) Nature , vol.408 , pp. 553-559
    • Kopp, A.1    Duncan, I.2    Godt, D.3    Carroll, S.B.4
  • 17
    • 49549112519 scopus 로고    scopus 로고
    • The regulation and evolution of a genetic switch controlling sexually dimorphic traits in Drosophila
    • Williams TM, Selegue JE, Werner T, Gompel N, Kopp A, et al. (2008) The regulation and evolution of a genetic switch controlling sexually dimorphic traits in Drosophila. Cell 134: 610-623.
    • (2008) Cell , vol.134 , pp. 610-623
    • Williams, T.M.1    Selegue, J.E.2    Werner, T.3    Gompel, N.4    Kopp, A.5
  • 18
    • 79955581901 scopus 로고    scopus 로고
    • The molecular genetics of clinal variation: a case study of ebony and thoracic trident pigmentation in Drosophila melanogaster from eastern Australia
    • Telonis-Scott M, Hoffmann AA, Sgro CM, (2011) The molecular genetics of clinal variation: a case study of ebony and thoracic trident pigmentation in Drosophila melanogaster from eastern Australia. Mol Ecol 20: 2100-2110.
    • (2011) Mol Ecol , vol.20 , pp. 2100-2110
    • Telonis-Scott, M.1    Hoffmann, A.A.2    Sgro, C.M.3
  • 19
    • 34447132938 scopus 로고    scopus 로고
    • The genetic basis of adaptive pigmentation variation in Drosophila melanogaster
    • Pool JE, Aquadro CF, (2007) The genetic basis of adaptive pigmentation variation in Drosophila melanogaster. Mol Ecol 16: 2844-2851.
    • (2007) Mol Ecol , vol.16 , pp. 2844-2851
    • Pool, J.E.1    Aquadro, C.F.2
  • 20
    • 44749091331 scopus 로고    scopus 로고
    • Changes in body melanisation and desiccation resistance in highland vs. lowland populations of D. melanogaster
    • Parkash R, Rajpurohit S, Ramniwas S, (2008) Changes in body melanisation and desiccation resistance in highland vs. lowland populations of D. melanogaster. J Insect Physiol 54: 1050-1056.
    • (2008) J Insect Physiol , vol.54 , pp. 1050-1056
    • Parkash, R.1    Rajpurohit, S.2    Ramniwas, S.3
  • 22
    • 33745227338 scopus 로고    scopus 로고
    • Regulation of body pigmentation by the Abdominal-B Hox protein and its gain and loss in Drosophila evolution
    • Jeong S, Rokas A, Carroll SB, (2006) Regulation of body pigmentation by the Abdominal-B Hox protein and its gain and loss in Drosophila evolution. Cell 125: 1387-1399.
    • (2006) Cell , vol.125 , pp. 1387-1399
    • Jeong, S.1    Rokas, A.2    Carroll, S.B.3
  • 23
    • 72949110371 scopus 로고    scopus 로고
    • Stepwise modification of a modular enhancer underlies adaptation in a Drosophila population
    • Rebeiz M, Pool JE, Kassner VA, Aquadro CF, Carroll SB, (2009) Stepwise modification of a modular enhancer underlies adaptation in a Drosophila population. Science 326: 1663-1667.
    • (2009) Science , vol.326 , pp. 1663-1667
    • Rebeiz, M.1    Pool, J.E.2    Kassner, V.A.3    Aquadro, C.F.4    Carroll, S.B.5
  • 24
    • 79851506303 scopus 로고    scopus 로고
    • Composite effects of polymorphisms near multiple regulatory elements create a major-effect QTL
    • Bickel RD, Kopp A, Nuzhdin SV, (2011) Composite effects of polymorphisms near multiple regulatory elements create a major-effect QTL. PLoS Genet 7: e1001275.
    • (2011) PLoS Genet , vol.7
    • Bickel, R.D.1    Kopp, A.2    Nuzhdin, S.V.3
  • 25
    • 0037298074 scopus 로고    scopus 로고
    • Quantitative trait loci responsible for variation in sexually dimorphic traits in Drosophila melanogaster
    • Kopp A, Graze RM, Xu S, Carroll SB, Nuzhdin SV, (2003) Quantitative trait loci responsible for variation in sexually dimorphic traits in Drosophila melanogaster. Genetics 163: 771-787.
    • (2003) Genetics , vol.163 , pp. 771-787
    • Kopp, A.1    Graze, R.M.2    Xu, S.3    Carroll, S.B.4    Nuzhdin, S.V.5
  • 27
    • 78751665708 scopus 로고    scopus 로고
    • The next generation of molecular markers from massively parallel sequencing of pooled DNA samples
    • Futschik A, Schlötterer C, (2010) The next generation of molecular markers from massively parallel sequencing of pooled DNA samples. Genetics 186: 207-218.
    • (2010) Genetics , vol.186 , pp. 207-218
    • Futschik, A.1    Schlötterer, C.2
  • 28
    • 77954198372 scopus 로고    scopus 로고
    • Design of association studies with pooled or un-pooled next-generation sequencing data
    • Kim SY, Li YR, Guo YR, Li RQ, Holmkvist J, et al. (2010) Design of association studies with pooled or un-pooled next-generation sequencing data. Genetic Epidemiology 34: 479-491.
    • (2010) Genetic Epidemiology , vol.34 , pp. 479-491
    • Kim, S.Y.1    Li, Y.R.2    Guo, Y.R.3    Li, R.Q.4    Holmkvist, J.5
  • 29
    • 0023732921 scopus 로고
    • Molecular and phenotypic variation of the white locus region in Drosophila melanogaster
    • Miyashita N, Langley CH, (1988) Molecular and phenotypic variation of the white locus region in Drosophila melanogaster. Genetics 120: 199-212.
    • (1988) Genetics , vol.120 , pp. 199-212
    • Miyashita, N.1    Langley, C.H.2
  • 31
    • 84866081815 scopus 로고    scopus 로고
    • Genomic variation in natural populations of Drosophila melanogaster
    • Langley CH, Stevens K, Cardeno C, Lee YC, Schrider DR, et al. (2012) Genomic variation in natural populations of Drosophila melanogaster. Genetics 192: 533-98.
    • (2012) Genetics , vol.192 , pp. 533-598
    • Langley, C.H.1    Stevens, K.2    Cardeno, C.3    Lee, Y.C.4    Schrider, D.R.5
  • 32
    • 0036340274 scopus 로고    scopus 로고
    • The bric à brac locus consists of two paralogous genes encoding BTB/POZ domain proteins and acts as a homeotic and morphogenetic regulator of imaginal development in Drosophila
    • Couderc JL, Godt D, Zollman S, Chen J, Li M, et al. (2002) The bric à brac locus consists of two paralogous genes encoding BTB/POZ domain proteins and acts as a homeotic and morphogenetic regulator of imaginal development in Drosophila. Development 129: 2419-2433.
    • (2002) Development , vol.129 , pp. 2419-2433
    • Couderc, J.L.1    Godt, D.2    Zollman, S.3    Chen, J.4    Li, M.5
  • 33
    • 79952453103 scopus 로고    scopus 로고
    • Genealogical lineage sorting leads to significant, but incorrect Bayesian multilocus inference of population structure
    • Orozco-terWengel P, Corander J, Schlötterer C, (2011) Genealogical lineage sorting leads to significant, but incorrect Bayesian multilocus inference of population structure. Mol Ecol 20: 1108-1121.
    • (2011) Mol Ecol , vol.20 , pp. 1108-1121
    • Orozco-terWengel, P.1    Corander, J.2    Schlötterer, C.3
  • 34
    • 84857498958 scopus 로고    scopus 로고
    • Sequencing of pooled DNA samples (Pool-Seq) uncovers complex dynamics of transposable element insertions in Drosophila melanogaster
    • Kofler R, Betancourt AJ, Schlötterer C, (2012) Sequencing of pooled DNA samples (Pool-Seq) uncovers complex dynamics of transposable element insertions in Drosophila melanogaster. PLoS Genet 8: e1002487.
    • (2012) PLoS Genet , vol.8
    • Kofler, R.1    Betancourt, A.J.2    Schlötterer, C.3
  • 35
    • 26444587281 scopus 로고    scopus 로고
    • Quantitative trait loci affecting the difference in pigmentation between Drosophila yakuba and D. santomea
    • Carbone MA, Llopart A, DeAngelis M, Coyne JA, Mackay TFC, (2005) Quantitative trait loci affecting the difference in pigmentation between Drosophila yakuba and D. santomea. Genetics 171: 211-225.
    • (2005) Genetics , vol.171 , pp. 211-225
    • Carbone, M.A.1    Llopart, A.2    DeAngelis, M.3    Coyne, J.A.4    Mackay, T.F.C.5
  • 36
    • 71149100245 scopus 로고    scopus 로고
    • Little effect of the tan locus on pigmentation in female hybrids between Drosophila santomea and D. melanogaster
    • Matute DR, Butler IA, Coyne JA, (2009) Little effect of the tan locus on pigmentation in female hybrids between Drosophila santomea and D. melanogaster. Cell 139: 1180-1188.
    • (2009) Cell , vol.139 , pp. 1180-1188
    • Matute, D.R.1    Butler, I.A.2    Coyne, J.A.3
  • 37
    • 67649873296 scopus 로고    scopus 로고
    • The causes of repeated genetic evolution
    • Gompel N, Prud'homme B, (2009) The causes of repeated genetic evolution. Devel Biol 332: 36-47.
    • (2009) Devel Biol , vol.332 , pp. 36-47
    • Gompel, N.1    Prud'homme, B.2
  • 38
    • 11244301144 scopus 로고    scopus 로고
    • Population genetics of the developmental gene optomotor-blind (omb) in Drosophila polymorpha: Evidence for a role in abdominal pigmentation variation
    • Brisson JA, Templeton AR, Duncan I, (2004) Population genetics of the developmental gene optomotor-blind (omb) in Drosophila polymorpha: Evidence for a role in abdominal pigmentation variation. Genetics 168: 1999-2010.
    • (2004) Genetics , vol.168 , pp. 1999-2010
    • Brisson, J.A.1    Templeton, A.R.2    Duncan, I.3
  • 39
    • 56049108371 scopus 로고    scopus 로고
    • Genetic basis of sex-specific color pattern variation in Drosophila malerkotliana
    • Ng CS, Hamilton AM, Frank A, Barmina O, Kopp A, (2008) Genetic basis of sex-specific color pattern variation in Drosophila malerkotliana. Genetics 180: 421-429.
    • (2008) Genetics , vol.180 , pp. 421-429
    • Ng, C.S.1    Hamilton, A.M.2    Frank, A.3    Barmina, O.4    Kopp, A.5
  • 40
    • 0001630724 scopus 로고
    • Thoracic trident pigmentation in Drosophila melanogaster: differentiation of geographical populations
    • David JR, Capy P, Payant V, Tsakas S, (1985) Thoracic trident pigmentation in Drosophila melanogaster: differentiation of geographical populations. Genetics Sel Evol 17: 211-223.
    • (1985) Genetics Sel Evol , vol.17 , pp. 211-223
    • David, J.R.1    Capy, P.2    Payant, V.3    Tsakas, S.4
  • 41
    • 0032034289 scopus 로고    scopus 로고
    • Light body pigmentation in Indian Drosophila melanogaster: a likely adaptation to a hot and arid climate
    • Gibert P, Moreteau B, Moreteau JC, Parkash R, David JR, (1998) Light body pigmentation in Indian Drosophila melanogaster: a likely adaptation to a hot and arid climate. J of Genetics 77: 13-20.
    • (1998) J of Genetics , vol.77 , pp. 13-20
    • Gibert, P.1    Moreteau, B.2    Moreteau, J.C.3    Parkash, R.4    David, J.R.5
  • 42
    • 0031416589 scopus 로고    scopus 로고
    • Thoracic trident pigmentation in Drosophila melanogaster: Latitudinal and altitudinal clines in Indian populations
    • Munjal AK, Karan D, Gibert P, Moreteau B, Parkash R, et al. (1997) Thoracic trident pigmentation in Drosophila melanogaster: Latitudinal and altitudinal clines in Indian populations. Genetics Selection Evolution 29: 601-610.
    • (1997) Genetics Selection Evolution , vol.29 , pp. 601-610
    • Munjal, A.K.1    Karan, D.2    Gibert, P.3    Moreteau, B.4    Parkash, R.5
  • 43
    • 0001935493 scopus 로고
    • Gene genealogies and the coalescent process
    • In: Futuyma D, Antonivics J, editors. Oxford: Oxford University Press
    • Hudson RR (1991) Gene genealogies and the coalescent process. In: Futuyma D, Antonivics J, editors. Oxford surveys in evolutionary biology. Oxford: Oxford University Press. pp. 1-44.
    • (1991) Oxford surveys in evolutionary biology , pp. 1-44
    • Hudson, R.R.1
  • 44
    • 0033827319 scopus 로고    scopus 로고
    • Developmental constraints on an adaptive plasticity: reaction norms of pigmentation in adult segments of Drosophila melanogaster
    • Gibert P, Moreteau B, David JR, (2000) Developmental constraints on an adaptive plasticity: reaction norms of pigmentation in adult segments of Drosophila melanogaster. Evol & Devel 2: 249-260.
    • (2000) Evol & Devel , vol.2 , pp. 249-260
    • Gibert, P.1    Moreteau, B.2    David, J.R.3
  • 45
    • 0034977045 scopus 로고    scopus 로고
    • Linkage disequilibrium in humans: models and data
    • Pritchard JK, Przeworski M, (2001) Linkage disequilibrium in humans: models and data. Am J Hum Genet 69: 1-14.
    • (2001) Am J Hum Genet , vol.69 , pp. 1-14
    • Pritchard, J.K.1    Przeworski, M.2
  • 46
    • 0026052189 scopus 로고
    • Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations
    • Michelmore RW, Paran I, Kesseli RV, (1991) Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proc Natl Acad Sci U S A 88: 9828-9832.
    • (1991) Proc Natl Acad Sci U S A , vol.88 , pp. 9828-9832
    • Michelmore, R.W.1    Paran, I.2    Kesseli, R.V.3
  • 47
    • 77951143253 scopus 로고    scopus 로고
    • Dissection of genetically complex traits with extremely large pools of yeast segregants
    • Ehrenreich IM, Torabi N, Jia Y, Kent J, Martis S, et al. (2010) Dissection of genetically complex traits with extremely large pools of yeast segregants. Nature 464: 1039-1042.
    • (2010) Nature , vol.464 , pp. 1039-1042
    • Ehrenreich, I.M.1    Torabi, N.2    Jia, Y.3    Kent, J.4    Martis, S.5
  • 48
    • 84866848293 scopus 로고    scopus 로고
    • Epistasis dominates the genetic architecture of Drosophila quantitative traits
    • Huang W, Richards S, Carbone MA, Zhu D, Anholt RR, et al. (2012) Epistasis dominates the genetic architecture of Drosophila quantitative traits. Proc Natl Acad Sci U S A 109: 15553-15559.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 15553-15559
    • Huang, W.1    Richards, S.2    Carbone, M.A.3    Zhu, D.4    Anholt, R.R.5
  • 49
    • 77957346489 scopus 로고    scopus 로고
    • Genome-wide analysis of a long-term evolution experiment with Drosophila
    • Burke MK, Dunham JP, Shahrestani P, Thornton KR, Rose MR, et al. (2010) Genome-wide analysis of a long-term evolution experiment with Drosophila. Nature 467: 587-590.
    • (2010) Nature , vol.467 , pp. 587-590
    • Burke, M.K.1    Dunham, J.P.2    Shahrestani, P.3    Thornton, K.R.4    Rose, M.R.5
  • 50
    • 79952291784 scopus 로고    scopus 로고
    • Experimental selection of hypoxia-tolerant Drosophila melanogaster
    • Zhou D, Udpa N, Gersten M, Visk DW, Bashir A, et al. (2011) Experimental selection of hypoxia-tolerant Drosophila melanogaster. Proc Natl Acad Sci U S A 108: 2349-2354.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 2349-2354
    • Zhou, D.1    Udpa, N.2    Gersten, M.3    Visk, D.W.4    Bashir, A.5
  • 51
    • 84867574655 scopus 로고    scopus 로고
    • Adaptation of Drosophila to a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles
    • Orozco-terWengel P, Kapun M, Nolte V, Kofler R, Flatt T, et al. (2012) Adaptation of Drosophila to a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles. Mol Ecol 21: 4931-4941.
    • (2012) Mol Ecol , vol.21 , pp. 4931-4941
    • Orozco-terWengel, P.1    Kapun, M.2    Nolte, V.3    Kofler, R.4    Flatt, T.5
  • 52
    • 79953735688 scopus 로고    scopus 로고
    • Population-based resequencing of experimentally evolved populations reveals the genetic basis of body size variation in Drosophila melanogaster
    • Turner TL, Stewart AD, Fields AT, Rice WR, Tarone AM, (2011) Population-based resequencing of experimentally evolved populations reveals the genetic basis of body size variation in Drosophila melanogaster. PLoS Genet 7: e1001336.
    • (2011) PLoS Genet , vol.7
    • Turner, T.L.1    Stewart, A.D.2    Fields, A.T.3    Rice, W.R.4    Tarone, A.M.5
  • 53
    • 84862564386 scopus 로고    scopus 로고
    • Investigating natural variation in Drosophila courtship song by the evolve and resequence approach
    • Turner TL, Miller PM, (2012) Investigating natural variation in Drosophila courtship song by the evolve and resequence approach. Genetics 191: 633-642.
    • (2012) Genetics , vol.191 , pp. 633-642
    • Turner, T.L.1    Miller, P.M.2
  • 54
    • 0031780483 scopus 로고    scopus 로고
    • Phenotypic plasticity of body pigmentation in Drosophila: correlated variations between segments
    • Gibert P, Moreteau B, Scheiner SM, David JR, (1998) Phenotypic plasticity of body pigmentation in Drosophila: correlated variations between segments. Genetics Sel Evol 30: 181-194.
    • (1998) Genetics Sel Evol , vol.30 , pp. 181-194
    • Gibert, P.1    Moreteau, B.2    Scheiner, S.M.3    David, J.R.4
  • 55
    • 79251557454 scopus 로고    scopus 로고
    • PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals
    • Kofler R, Orozco-terWengel P, De Maio N, Pandey RV, Nolte V, et al. (2011) PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals. PLoS One 6: e15925.
    • (2011) PLoS One , vol.6
    • Kofler, R.1    Orozco-terWengel, P.2    De Maio, N.3    Pandey, R.V.4    Nolte, V.5
  • 56
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R, (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25: 1754-1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 58
    • 84968961714 scopus 로고
    • A new species closely resembling Drosphila melanogaster
    • Sturtevant AH, (1919) A new species closely resembling Drosphila melanogaster. Psyche 26: 153-155.
    • (1919) Psyche , vol.26 , pp. 153-155
    • Sturtevant, A.H.1
  • 59
    • 77951820899 scopus 로고    scopus 로고
    • Fast and SNP-tolerant detection of complex variants and splicing in short reads
    • Wu TD, Nacu S, (2010) Fast and SNP-tolerant detection of complex variants and splicing in short reads. Bioinformatics 26: 873-881.
    • (2010) Bioinformatics , vol.26 , pp. 873-881
    • Wu, T.D.1    Nacu, S.2
  • 60
    • 18744383071 scopus 로고    scopus 로고
    • GMAP: a genomic mapping and alignment program for mRNA and EST sequences
    • Wu TD, Watanabe CK, (2005) GMAP: a genomic mapping and alignment program for mRNA and EST sequences. Bioinformatics 21: 1859-1875.
    • (2005) Bioinformatics , vol.21 , pp. 1859-1875
    • Wu, T.D.1    Watanabe, C.K.2
  • 61
    • 83355175374 scopus 로고    scopus 로고
    • PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)
    • Kofler R, Pandey RV, Schlötterer C, (2011) PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq). Bioinformatics 27: 3435-3436.
    • (2011) Bioinformatics , vol.27 , pp. 3435-3436
    • Kofler, R.1    Pandey, R.V.2    Schlötterer, C.3
  • 62
    • 84862506964 scopus 로고    scopus 로고
    • A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3
    • Cingolani P, Platts A, Wang le L, Coon M, Nguyen T, et al. (2012) A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3. Fly (Austin) 6: 80-92.
    • (2012) Fly (Austin) , vol.6 , pp. 80-92
    • Cingolani, P.1    Platts, A.2    Wang le, L.3    Coon, M.4    Nguyen, T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.