-
1
-
-
79959873574
-
Identification and molecular typing of streptococcus agalactiae isolated from pond-cultured tilapia in china
-
Ye X, Li J, Lu M, Deng G, Jiang X, Tian Y, Quan Y, Jian Q (2011) Identification and molecular typing of Streptococcus agalactiae isolated from pond-cultured tilapia in China. Fisheries Sci 77:623-632
-
(2011)
Fisheries Sci
, vol.77
, pp. 623-632
-
-
Ye, X.1
Li, J.2
Lu, M.3
Deng, G.4
Jiang, X.5
Tian, Y.6
Quan, Y.7
Jian, Q.8
-
2
-
-
57049122389
-
A large genome center's improvements to the illumina sequencing system
-
Quail MA, Kozarewa I, Smith F, Scally A, Stephens PJ, Durbin R, Swerdlow H, Turner DJ (2008) A large genome center's improvements to the Illumina sequencing system. Nat Methods 5:1005-1010
-
(2008)
Nat Methods
, vol.5
, pp. 1005-1010
-
-
Quail, M.A.1
Kozarewa, I.2
Smith, F.3
Scally, A.4
Stephens, P.J.5
Durbin, R.6
Swerdlow, H.7
Turner, D.J.8
-
3
-
-
39449089394
-
Parallel tagged sequencing on the 454 platform
-
Meyer M, Stenzel U, Hofreiter M (2008) Parallel tagged sequencing on the 454 platform. Nat Protoc 3:267-278
-
(2008)
Nat Protoc
, vol.3
, pp. 267-278
-
-
Meyer, M.1
Stenzel, U.2
Hofreiter, M.3
-
4
-
-
39649117755
-
The impact of next-generation sequencing technology on genetics
-
Mardis ER (2008) The impact of next-generation sequencing technology on genetics. Trends Genet 24:133-141
-
(2008)
Trends Genet
, vol.24
, pp. 133-141
-
-
Mardis, E.R.1
-
5
-
-
46249130709
-
The beginning of the end for microarrays?
-
Shendure J (2008) The beginning of the end for microarrays? Nat Methods 5:585-587
-
(2008)
Nat Methods
, vol.5
, pp. 585-587
-
-
Shendure, J.1
-
6
-
-
57749195712
-
Rna-seq: A revolutionary tool for transcriptomics
-
Wang Z, Gerstein M, Snyder M (2009) RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet 10:57-63
-
(2009)
Nat Rev Genet
, vol.10
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
7
-
-
84878351035
-
Development and characterization of novel polymorphic microsatellite loci in siniperca scherzeri steindachner and siniperca chuatsi (basilewsky)
-
Huang W, Liang X, Qu C, Cao J, Zhao C, Cao L (2013) Development and characterization of novel polymorphic microsatellite loci in Siniperca scherzeri Steindachner and Siniperca chuatsi (Basilewsky). Mol Biol Rep 40:751-756
-
(2013)
Mol Biol Rep
, vol.40
, pp. 751-756
-
-
Huang, W.1
Liang, X.2
Qu, C.3
Cao, J.4
Zhao, C.5
Cao, L.6
-
8
-
-
68749107979
-
Deep sequencing of the zebrafish transcriptome response to mycobacterium infection
-
Hegedus Z, Zakrzewska A, Agoston VC, Ordas A, Rácz P, Mink M, Spaink HP, Meijer AH (2009) Deep sequencing of the zebrafish transcriptome response to mycobacterium infection. Mol Immunol 46:2918-2930
-
(2009)
Mol Immunol
, vol.46
, pp. 2918-2930
-
-
Hegedus, Z.1
Zakrzewska, A.2
Agoston, V.C.3
Ordas, A.4
Rácz, P.5
Mink, M.6
Spaink, H.P.7
Meijer, A.H.8
-
9
-
-
80053233587
-
Deep sequencing of the innate immune transcriptomic response of zebrafish embryos to salmonella infection
-
Ordas A, Hegedus Z, Henkel CV, Stockhammer OW, Butler D, Jansen HJ, Racz P, Mink M, Spaink HP, Meijer AH (2011) Deep sequencing of the innate immune transcriptomic response of zebrafish embryos to Salmonella infection. Fish Shellfish Immunol 31:716-724
-
(2011)
Fish Shellfish Immunol
, vol.31
, pp. 716-724
-
-
Ordas, A.1
Hegedus, Z.2
Henkel, C.V.3
Stockhammer, O.W.4
Butler, D.5
Jansen, H.J.6
Racz, P.7
Mink, M.8
Spaink, H.P.9
Meijer, A.H.10
-
10
-
-
77957903728
-
Transcriptome and expression profiling analysis revealed changes of multiple signaling pathways involved in immunity in the large yellow croaker during aeromonas hydrophila infection
-
Mu Y, Ding F, Cui P, Ao J, Hu S, Chen X (2010) Transcriptome and expression profiling analysis revealed changes of multiple signaling pathways involved in immunity in the large yellow croaker during Aeromonas hydrophila infection. BMC Genomics 11:506
-
(2010)
BMC Genomics
, vol.11
, pp. 506
-
-
Mu, Y.1
Ding, F.2
Cui, P.3
Ao, J.4
Hu, S.5
Chen, X.6
-
11
-
-
77955487334
-
Deep sequencing-based transcriptome profiling analysis of bacteriachallenged lateolabrax japonicus reveals insight into the immune-relevant genes in marine fish
-
Xiang LX, He D, Dong WR, Zhang YW, Shao JZ (2010) Deep sequencing-based transcriptome profiling analysis of bacteriachallenged Lateolabrax japonicus reveals insight into the immune-relevant genes in marine fish. BMC Genomics 11:472
-
(2010)
BMC Genomics
, vol.11
, pp. 472
-
-
Xiang, L.X.1
He, D.2
Dong, W.R.3
Zhang, Y.W.4
Shao, J.Z.5
-
12
-
-
24644503098
-
Blast2go: A universal tool for annotation, visualization and analysis in functional genomics research
-
Conesa A, Gotz S, Garcia-Gomez JM, Terol J, Talon M, Robles M (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21:3674-3676
-
(2005)
Bioinformatics
, vol.21
, pp. 3674-3676
-
-
Conesa, A.1
Gotz, S.2
Garcia-Gomez, J.M.3
Terol, J.4
Talon, M.5
Robles, M.6
-
13
-
-
33747846582
-
Wego: A web tool for plotting go annotations
-
Ye J, Fang L, Zheng H, Zhang Y, Chen J, Zhang Z, Wang J, Li S, Li R, Bolund L, Wang J (2006) WEGO: a web tool for plotting GO annotations. Nucleic Acids Res 34:293-297
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 293-297
-
-
Ye, J.1
Fang, L.2
Zheng, H.3
Zhang, Y.4
Chen, J.5
Zhang, Z.6
Wang, J.7
Li, S.8
Li, R.9
Bolund, L.10
Wang, J.11
-
14
-
-
70349636603
-
Next-generation tag sequencing for cancer gene expression profiling
-
Morrissy AS, Morin RD, Delaney A, Zeng T, McDonald H, Jones S, Zhao Y, Hirst M, Marra MA (2009) Next-generation tag sequencing for cancer gene expression profiling. Genome Res 19:1825-1835
-
(2009)
Genome Res
, vol.19
, pp. 1825-1835
-
-
Morrissy, A.S.1
Morin, R.D.2
Delaney, A.3
Zeng, T.4
McDonald, H.5
Jones, S.6
Zhao, Y.7
Hirst, M.8
Marra, M.A.9
-
15
-
-
0030681260
-
The significance of digital gene expression profiles
-
Audic S, Claverie JM (1997) The significance of digital gene expression profiles. Genome Res 7:986-995
-
(1997)
Genome Res
, vol.7
, pp. 986-995
-
-
Audic, S.1
Claverie, J.M.2
-
16
-
-
0035733108
-
The control of the false discovery rate in multiple testing under dependency
-
Benjamini Y, Yekutieli D (2001) The control of the false discovery rate in multiple testing under dependency. Ann Stat 29:1165-1188
-
(2001)
Ann Stat
, vol.29
, pp. 1165-1188
-
-
Benjamini, Y.1
Yekutieli, D.2
-
17
-
-
44949231424
-
Analyzing real-time pcr data by the comparative ct method
-
Schmittgen TD, Kenneth J, Livak KJ (2008) Analyzing real-time PCR data by the comparative CT method. Nat Protoc 3:1101-1108
-
(2008)
Nat Protoc
, vol.3
, pp. 1101-1108
-
-
Schmittgen, T.D.1
Kenneth, J.2
Livak, K.J.3
-
18
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative pcr and the 2-ddct method
-
Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2-DDCT method. Methods 25:402-408
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
19
-
-
84858110011
-
Recent advances in understanding the molecular basis of group b streptococcus virulence
-
Maisey HC, Doran KS, Nizet V (2009) Recent advances in understanding the molecular basis of group B Streptococcus virulence. Expert Rev Mol Med 10:e27
-
(2009)
Expert Rev Mol Med
, vol.10
-
-
Maisey, H.C.1
Doran, K.S.2
Nizet, V.3
-
20
-
-
77957751226
-
Cloning, expression, purification and ligand binding studies of novel fibrinogen-binding protein fbsb of streptococcus agalactiae
-
Devi AS, Ponnuraj K (2010) Cloning, expression, purification and ligand binding studies of novel fibrinogen-binding protein FbsB of Streptococcus agalactiae. Protein Expr Purif 74:148-155
-
(2010)
Protein Expr Purif
, vol.74
, pp. 148-155
-
-
Devi, A.S.1
Ponnuraj, K.2
-
21
-
-
77952955640
-
Transcriptome profiling of zebrafish infected with streptococcus suis
-
Wu Z, Zhang W, Lu Y, Lu C (2010) Transcriptome profiling of zebrafish infected with Streptococcus suis. Microb Pathog 48:178-187
-
(2010)
Microb Pathog
, vol.48
, pp. 178-187
-
-
Wu, Z.1
Zhang, W.2
Lu, Y.3
Lu, C.4
-
22
-
-
59349091828
-
Identification of novel genes in japanese flounder (paralichthys olivaceus) head kidney up-regulated after vaccination with streptococcus iniae formalin-killed cells
-
Dumrongphol Y, Hirota T, Kondo H, Aoki T, Hirono I (2009) Identification of novel genes in Japanese flounder (Paralichthys olivaceus) head kidney up-regulated after vaccination with Streptococcus iniae formalin-killed cells. Fish Shellfish Immunol 26:197-200
-
(2009)
Fish Shellfish Immunol
, vol.26
, pp. 197-200
-
-
Dumrongphol, Y.1
Hirota, T.2
Kondo, H.3
Aoki, T.4
Hirono, I.5
-
25
-
-
67349208525
-
Cloning and expression analysis of three striped trumpeter (latris lineata) pro-inflammatory cytokines, tnf-A, il-1b and il-8, in response to infection by the ectoparasitic, chondracanthus goldsmidi
-
Covello JM, Bird S, Morrison RN, Battaglene SC, Secombes CJ, Nowak BF (2009) Cloning and expression analysis of three striped trumpeter (Latris lineata) pro-inflammatory cytokines, TNF-A, IL-1b and IL-8, in response to infection by the ectoparasitic, Chondracanthus goldsmidi. Fish Shellfish Immunol 26:773-786
-
(2009)
Fish Shellfish Immunol
, vol.26
, pp. 773-786
-
-
Covello, J.M.1
Bird, S.2
Morrison, R.N.3
Battaglene, S.C.4
Secombes, C.J.5
Nowak, B.F.6
-
27
-
-
63649108380
-
The roles of tlrs, rlrs and nlrs in pathogen recognition
-
Kawai T, Akira S (2009) The roles of TLRs, RLRs and NLRs in pathogen recognition. Int Immunol 21:317-337
-
(2009)
Int Immunol
, vol.21
, pp. 317-337
-
-
Kawai, T.1
Akira, S.2
-
28
-
-
67649840704
-
Signalling through c-type lectin receptors: Shaping immune responses
-
Geijtenbeek TB, Gringhuis SI (2009) Signalling through C-type lectin receptors: shaping immune responses. Nat Rev 9:465-479
-
(2009)
Nat Rev
, vol.9
, pp. 465-479
-
-
Geijtenbeek, T.B.1
Gringhuis, S.I.2
-
29
-
-
66449088641
-
Pathogen recognition and inflammatory signaling in innate immune defenses
-
Mogensen TH (2009) Pathogen recognition and inflammatory signaling in innate immune defenses. Clin Microbiol Rev 22:240-273
-
(2009)
Clin Microbiol Rev
, vol.22
, pp. 240-273
-
-
Mogensen, T.H.1
-
30
-
-
80455168991
-
Toll-like receptors in bony fish: From genomics to function
-
Palti Y (2011) Toll-like receptors in bony fish: from genomics to function. Dev Comp Immunol 35:1263-1272
-
(2011)
Dev Comp Immunol
, vol.35
, pp. 1263-1272
-
-
Palti, Y.1
-
31
-
-
33847183077
-
Cooperation of toll-like receptor signals in innate immune defence
-
Trinchieri G, Sher A (2007) Cooperation of Toll-like receptor signals in innate immune defence. Nat Rev 7:179-190
-
(2007)
Nat Rev
, vol.7
, pp. 179-190
-
-
Trinchieri, G.1
Sher, A.2
-
32
-
-
0347480221
-
Expression analysis of the tolllike receptor, tir domain adaptor families of zebrafish
-
Meijer AH, Gabby Krens SF, Medina RI, He S, Bitter W, Snaar-Jagalska BE, Spaink HP (2004) Expression analysis of the Tolllike receptor, TIR domain adaptor families of zebrafish. Mol Immunol 40:773-783
-
(2004)
Mol Immunol
, vol.40
, pp. 773-783
-
-
Meijer, A.H.1
Gabby Krens, S.F.2
Medina, R.I.3
He, S.4
Bitter, W.5
Snaar-Jagalska, B.E.6
Spaink, H.P.7
-
33
-
-
33845797037
-
Structural characterisation, expression analysis of toll-like receptor 2 gene from catfish
-
Baoprasertkul P, Peatman E, Abernathy J, Liu Z (2007) Structural characterisation, expression analysis of Toll-like receptor 2 gene from catfish. Fish Shellfish Immunol 22:418-426
-
(2007)
Fish Shellfish Immunol
, vol.22
, pp. 418-426
-
-
Baoprasertkul, P.1
Peatman, E.2
Abernathy, J.3
Liu, Z.4
-
34
-
-
25844505105
-
Characterization of toll-like receptor 3 gene in rainbow trout (oncorhynchus mykiss)
-
Rodriguez MF, Wiens GD, Purcell MK, Palti Y (2005) Characterization of Toll-like receptor 3 gene in rainbow trout (Oncorhynchus mykiss). Immunogenetics 57:510-519
-
(2005)
Immunogenetics
, vol.57
, pp. 510-519
-
-
Rodriguez, M.F.1
Wiens, G.D.2
Purcell, M.K.3
Palti, Y.4
-
35
-
-
33749656776
-
Tolllike receptor 3, ticam genes in catfish: Species-specific expression pro-files following infection with edwardsiella ictaluri
-
Baoprasertkul P, Peatman E, Somridhivej B, Liu Z (2006) Tolllike receptor 3, TICAM genes in catfish: species-specific expression pro-files following infection with Edwardsiella ictaluri. Immunogenetics 58:817-830
-
(2006)
Immunogenetics
, vol.58
, pp. 817-830
-
-
Baoprasertkul, P.1
Peatman, E.2
Somridhivej, B.3
Liu, Z.4
-
36
-
-
77749285687
-
Nod-like receptor signaling beyond the inflammasome
-
Shaw PJ, Lamkanfi M, Kanneganti TD (2010) NOD-like receptor signaling beyond the inflammasome. Eur J Immunol 40:624-627
-
(2010)
Eur J Immunol
, vol.40
, pp. 624-627
-
-
Shaw, P.J.1
Lamkanfi, M.2
Kanneganti, T.D.3
-
37
-
-
66149086936
-
Nod-like receptors: Role in innate immunity and inflammatory disease
-
Chen G, Shaw MH, Kim YG, Nunez G (2009) NOD-Like Receptors: role in innate immunity and inflammatory disease. Annu Rev Pathol Mech Dis 4:365-398
-
(2009)
Annu Rev Pathol Mech Dis
, vol.4
, pp. 365-398
-
-
Chen, G.1
Shaw, M.H.2
Kim, Y.G.3
Nunez, G.4
-
38
-
-
35348932070
-
Intracellular nod-like receptors in host defense and disease
-
Kanneganti TD, Lamkanfi M, Núnez G (2007) Intracellular NOD-like receptors in host defense and disease. Immunity 27:549-559
-
(2007)
Immunity
, vol.27
, pp. 549-559
-
-
Kanneganti, T.D.1
Lamkanfi, M.2
Núnez, G.3
-
39
-
-
0141992093
-
The mhc class i antigen presentation pathway: Strategies for viral immune evasion
-
Hewitt EW (2003) The MHC class I antigen presentation pathway: strategies for viral immune evasion. Immunology 110:163-169
-
(2003)
Immunology
, vol.110
, pp. 163-169
-
-
Hewitt, E.W.1
-
40
-
-
84864115951
-
Analysis of porcine mhc using microarrays
-
Gao Y, Wahlberg P, Marthey S, Esquerré D, Jaffrézic F, Lecardonnel J, Hugot K, Rogel-Gaillard C (2012) Analysis of porcine MHC using microarrays. Vet Immunol Immunopathol 148:78-84
-
(2012)
Vet Immunol Immunopathol
, vol.148
, pp. 78-84
-
-
Gao, Y.1
Wahlberg, P.2
Marthey, S.3
Esquerré, D.4
Jaffrézic, F.5
Lecardonnel, J.6
Hugot, K.7
Rogel-Gaillard, C.8
-
41
-
-
52249096222
-
Human neonatal dendritic cells are competent in mhc class i antigen processing and presentation
-
Gold MC, Robinson TL, Cook MS, Byrd LK, Ehlinger HD, Lewinsohn DM, Lewinsohn DA (2007) Human neonatal dendritic cells are competent in MHC Class I antigen processing and presentation. PLoS One 9:e957
-
(2007)
PLoS One
, vol.9
-
-
Gold, M.C.1
Robinson, T.L.2
Cook, M.S.3
Byrd, L.K.4
Ehlinger, H.D.5
Lewinsohn, D.M.6
Lewinsohn, D.A.7
-
42
-
-
0037047353
-
A new trigger for t cells
-
Davis MM (2002) A new trigger for T cells. Cell 110:285-287
-
(2002)
Cell
, vol.110
, pp. 285-287
-
-
Davis, M.M.1
-
43
-
-
75149113532
-
Characterization of the zebrafish t cell receptor beta locus
-
Meeker ND, Smith AC, Frazer JK, Bradley DF, Rudner LA, Love C, Trede NS (2010) Characterization of the zebrafish T cell receptor beta locus. Immunogenetics 62:23-29
-
(2010)
Immunogenetics
, vol.62
, pp. 23-29
-
-
Meeker, N.D.1
Smith, A.C.2
Frazer, J.K.3
Bradley, D.F.4
Rudner, L.A.5
Love, C.6
Trede, N.S.7
-
45
-
-
0037304929
-
Role of protein tyrosine phosphatases in t cell activation
-
Mustelin T, Rahmouni S, Bottini N, Alonso A (2003) Role of protein tyrosine phosphatases in T cell activation. Immunol Rev 191:139-147
-
(2003)
Immunol Rev
, vol.191
, pp. 139-147
-
-
Mustelin, T.1
Rahmouni, S.2
Bottini, N.3
Alonso, A.4
|