Multiple waves of colonization by monarch flycatchers (Myiagra, Monarchidae) across the Indo-Pacific and their implications for coexistence and speciation

Journal of Biogeography

Volumn 41, Issue 2, 2014, Pages 274-286

  Fabre, Pierre Henri ^a   Moltensen, Maria ^a   Fjeldså, Jon ^a   Irestedt, Martin ^b   Lessard, Jean Philippe ^c,d   Jønsson, Knud A ^a,e  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b SWEDISH MUSEUM OF NATURAL HISTORY   (Sweden)

^c UNIVERSITY OF COPENHAGEN   (Denmark)

^d MCGILL UNIVERSITY   (Canada)

^e IMPERIAL COLLEGE LONDON   (United Kingdom)

Author keywords

Colonization; Community assembly; Indo Pacific; Island biogeography; Island evolution; Monarchidae; Myiagra; Priority effects; Speciation; Trait evolution

Indexed keywords

BIOGEOGRAPHY; COEXISTENCE; COLONIZATION; DATA SET; DISPERSAL; ECOMORPHOLOGY; LIFE HISTORY TRAIT; MIOCENE; MOLECULAR ANALYSIS; PASSERINE; PHYLOGENY; PRIORITIZATION; RECONSTRUCTION; SPECIATION (BIOLOGY); TAXONOMY;

AUSTRALIA; MOLUCCAS; NEW GUINEA; PACIFIC ISLANDS; PACIFIC OCEAN;

ARSES; AVES; MONARCHIDAE; MYIAGRA;

EID: 84892559678     PISSN: 03050270     EISSN: 13652699     Source Type: Journal    
DOI: 10.1111/jbi.12202     Document Type: Article

References (59)

1. Bickel, D.J. (2009) Amblypsilopus (Diptera: Dolichopodidae: Sciapodinae) from the Southwest Pacific, with a focus on the radiation in Fiji and Vanuatu. Bishop Museum Occasional Papers, 103, 3-61.
2. Carson, H.L. & Clague, D.A. (1995) Geology and biogeography of the Hawaiian Islands. Hawaiian biogeography: evolution on a hotspot archipelago (ed. by W.L. Wagner and V.A. Funk ), pp. 14-29. Smithsonian Institution Press, Washington, DC.
3. Chesser, R.T. (1999) Molecular systematics of the rhinocryptid genus Pteroptochos. The Condor, 101, 439-446.
4. Cibois, A., Thibault, J.C. & Pasquet, E. (2004) Biogeography of eastern Polynesian monarchs (Pomarea): an endemic genus close to extinction. The Condor, 106, 837-851.
5. Cibois, A., Beadell, J.S., Graves, G.R., Pasquet, E., Slikas, B., Sonsthagen, S.A., Thibault, J.C. & Fleischer, R.C. (2011) Charting the course of reed-warblers across the Pacific islands. Journal of Biogeography, 38, 1963-1975.
6. Cicero, C. & Johnson, N.K. (2001) Higher-level phylogeny of New World vireos (Aves: Vireonidae) based on sequences of multiple mitochondrial DNA genes. Molecular Phylogenetics and Evolution, 20, 27-40.
7. Clements, J. (2007) The Clements checklist of birds of the world. Cornell University Press, Ithaca, NY.
8. Coates, B.J., Dutson, G.C.L. & Filardi, C.E. (2006) Family Monarchidae (monarch-flycatchers). Handbook of the birds of the world, Vol. 11: Old World flycatchers to Old World warblers (ed. by J. del Hoyo, A. Elliot and D. Christie ), pp. 244-329. Lynx Edicions, Barcelona.
9. Collins, M.D., Simberloff, D. & Connor, E.F. (2011) Binary matrices and checkerboard distributions of birds in the Bismarck Archipelago. Journal of Biogeography, 38, 2373-2383.
10. Connor, E.F. & Simberloff, D. (1979) The assembly of species communities: chance or competition? Ecology, 60, 1132-1140.
11. Darwin, C. (1859) The origin of species by means of natural selection. John Murray, London, UK.
12. Diamond, J.M. (1975) Assembly of species communities. Ecology and evolution of communities (ed. by M.L. Cody and J.M. Diamond ), pp. 342-444. Harvard University Press, Cambridge, MA.
13. Drummond, A.J. & Rambaut, A. (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology, 7, 214.
14. Fabre, P.-H., Irestedt, M., Fjeldså, J., Bristol, R., Groombridge, J.J., Irham, M. & Jønsson, K.A. (2012) Dynamic colonization exchanges between continents and islands drive diversification in paradise-flycatchers (Terpsiphone, Monarchidae). Journal of Biogeography, 39, 1900-1918.
15. Filardi, C.E. & Moyle, R.G. (2005) Single origin of a pan-Pacific bird group and upstream colonization of Australasia. Nature, 438, 216-219.
16. Filardi, C.E. & Smith, C. (2005) Molecular phylogenetics of monarch flycatchers (genus Monarcha) with emphasis on Solomon Island endemics. Molecular Phylogenetics and Evolution, 37, 776-788.
17. Fukami, T., Beaumont, H.J.E., Zhang, X.-X. & Rainey, P.B. (2007) Immigration history controls diversification in experimental adaptive radiation. Nature, 446, 436-439.
18. Grant, P.R. & Grant, B.R. (2008) How and why species multiply: the radiation of Darwin's finches. Princeton University Press, Princeton, NJ.
19. Hackett, S.J. (1996) Molecular phylogenetics and biogeography of tanagers in the genus Ramphocelus (Aves). Molecular Phylogenetics and Evolution, 5, 368-382.
20. Hall, R. (2002) Cenozoic geological and plate tectonic evolution of SE Asia and the SW Pacific: computer-based reconstructions, model and animations. Journal of Asian Earth Science, 20, 353-431.
21. Higgins, P.J., Peter, J.M. & Cowling, S.J. (2006) Handbook of Australian, New Zealand and Antarctic Birds, Vol. 7. Boatbill to starlings. Oxford University Press, Melbourne.
22. Irestedt, M., Ohlson, J.I., Zuccon, D., Källersjö, M. & Ericson, P.G.P. (2006) Nuclear DNA from old collections of avian study skins reveals the evolutionary history of the Old World suboscines (Aves, Passeriformes). Zoologica Scripta, 35, 567-580.
23. Jønsson, K.A., Bowie, R.C.K., Moyle, R.G., Christidis, L., Norman, J.A., Benz, B.W. & Fjeldså, J. (2010a) Historical biogeography of an Indo-Pacific passerine bird family (Pachycephalidae): different colonization patterns in the Indonesian and Melanesian archipelagos. Journal of Biogeography, 37, 245-257.
24. Jønsson, K.A., Bowie, R.C.K., Nylander, J.A.A., Christidis, L., Norman, J.A. & Fjeldså, J. (2010b) Biogeographical history of cuckoo-shrikes (Aves: Passeriformes): transoceanic colonization of Africa from Australo-Papua. Journal of Biogeography, 37, 1767-1781.
25. Jønsson, K.A., Irestedt, M., Bowie, R.C., Christidis, L. & Fjeldså, J. (2011a) Systematics and biogeography of Indo-Pacific ground-doves. Molecular Phylogenetics and Evolution, 59, 538-543.
26. Jønsson, K.A., Fabre, P.-H., Ricklefs, R.E. & Fjeldså, J. (2011b) Major global radiation of corvoid birds originated in the proto-Papuan archipelago. Proceedings of the National Academy of Sciences USA, 108, 2328-2333.
27. Lewis, P.O. (2001) A likelihood approach to estimating phylogeny from discrete morphological character data. Systematic Biology, 50, 913-925.
28. Lohman, D.J., de Bruyn, M., Page, T., von Rintelen, K., Hall, R., Ng, P.K.L., Shih, H.-T., Carvalho, G.R. & Rintelen, T. (2011) Biogeography of the Indo-Australian Archipelago. Annual Review of Ecology, Evolution, and Systematics, 42, 205-226.
29. MacArthur, R.H. & Wilson, E.O. (1963) An equilibrium theory of insular zoogeography. Evolution, 17, 373-387.
30. MacArthur, R.H. & Wilson, E.O. (1967) The theory of island biogeography. Princeton University Press, Princeton, NJ.
31. Maddison, W.P. & Maddison, D.R. (2010) Mesquite: a modular system for evolutionary analysis. Version 2.73. Available at: http://mesquiteproject.org.
32. Mayr, E. (1942) Systematics and the origin of species, from the viewpoint of a zoologist. Harvard University Press, Cambridge, MA.
33. Mayr, E. & Diamond, J.M. (2001) The birds of northern Melanesia: speciation, ecology, and biogeography. Oxford University Press, New York.
34. Miles, D.B., Ricklefs, R.E. & Travis, J. (1987) Concordance of ecomorphological relationships in three assemblages of passerine birds. The American Naturalist, 129, 347-364.
35. Moyle, R.G., Filardi, C.E., Smith, C.E. & Diamond, J. (2009) Explosive Pleistocene diversification and hemispheric expansion of a "great speciator". Proceedings of the National Academy of Sciences USA, 106, 1863-1868.
36. Nyári, A.S. & Joseph, L. (2012) Evolution in Australasian mangrove forests: multilocus phylogenetic analysis of the Gerygone warblers (Aves: Acanthizidae). PLoS ONE, 7, e31840.
37. Paradis, E. (2010) pegas: an R package for population genetics with an integrated-modular approach. Bioinformatics, 26, 419-420.
38. Pereira, S.L. & Baker, A.J. (2006) A mitogenomic timescale for birds detects variable phylogenetic rates of molecular evolution and refutes the standard molecular clock. Molecular Biology and Evolution, 23, 1731-1740.
39. Philippe, H. (1993) MUST: a computer package of management utilities for sequences and trees. Nucleic Acids Research, 21, 5264-5272.
40. Pigot, A.L., Phillimore, A.B., Owens, I.P.F. & Orme, C.D. (2010) The shape and temporal dynamics of phylogenetic trees arising from geographic speciation. Systematic Biology, 59, 660-673.
41. Posada, D. & Crandall, K.A. (1998) Modeltest: testing the model of DNA substitution. Bioinformatics, 14, 817-818.
42. Pratt, H.D. (2005) The Hawaiian honeycreepers: Drepanidinae (Bird Families of the World). Oxford University Press, Oxford.
43. Price, T.D. (2010) The roles of time and ecology in the continental radiation of the Old World leaf warblers (Phylloscopus and Seicercus). Philosophical Transactions of the Royal Society B: Biological Sciences, 365, 1749-1762.
44. R Development Core Team (2012) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. Available at: http://www.R-project.org.
45. Rahbek, C. & Graves, G.R. (2001) Multiscale assessment of patterns of avian species richness. Proceedings of the National Academy of Sciences USA, 98, 4534-4539.
46. Rahbek, C., Hansen, L.A. & Fjeldså, J. (2012) One degree resolution database of the global distribution of birds. The Natural History Museum of Denmark, University of Copenhagen, Denmark. Available at: http://www.macroecology.ku.dk/resources/.
47. Ree, R.H., Moore, B.R., Webb, C.O. & Donoghue, M.J. (2005) A likelihood framework for inferring the evolution of geographic range on phylogenetic trees. Evolution, 59, 2299-2311.
48. Ricklefs, R.E. & Bermingham, E. (2007) The causes of evolutionary radiations in archipelagoes: passerine birds in the Lesser Antilles. The American Naturalist, 169, 285-297.
49. Ronquist, F. & Huelsenbeck, J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574.
50. Rosindell, J. & Phillimore, A.B. (2011) A unified model of island biogeography sheds light on the zone of radiation. Ecology Letters, 14, 552-560.
51. Rundell, R.J. & Price, T.D. (2009) Adaptive radiation, nonadaptive radiation, ecological speciation and nonecological speciation. Trends in Ecology and Evolution, 24, 394-399.
52. Sanderson, J.G., Diamond, J. & Pimm, S.L. (2011) Response to Collins et al. (2011). Journal of Biogeography, 38, 2397-2404.
53. Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688-2690.
54. Stephens, P.R. & Wiens, J.J. (2004) Convergence, divergence, and homogenization in the ecological structure of emydid turtle communities: the effects of phylogeny and dispersal. The American Naturalist, 164, 244-254.
55. Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011) MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28, 2731-2739.
56. Townsend, T.M., Mulcahy, D.G., Noonan, B.P., Sites, J.W., Jr, Kuczynski, C.A., Wiens, J.J. & Reeder, T.W. (2011) Phylogeny of iguanian lizards inferred from 29 nuclear loci, and a comparison of concatenated and species-tree approaches for an ancient, rapid radiation. Molecular Phylogenetics and Evolution, 61, 363-380.
57. VanderWerf, E.A., Young, L.C., Yeung, N.W. & Carlon, D.B. (2009) Stepping stone speciation in Hawaii's flycatchers: molecular divergence supports new island endemic within the elepaio. Conservation Genetics, 11, 1283-1298.
58. Voris, H.K. (2000) Maps of Pleistocene sea levels in Southeast Asia: shorelines, river systems and time durations. Journal of Biogeography, 27, 1153-1167.
59. Waters, J.M. (2011) Competitive exclusion: phylogeography's 'elephant in the room'? Molecular Ecology, 20, 4388-4394.