Genetics of yeasts

Meat Biotechnology

Volumn , Issue , 2008, Pages 167-179

  Querol, Amparo ^a   Fernández Espinar, Ma Teresa ^a   Belloch, Carmela ^a  

^a INSTITUTO DE AGROQUÍMICA Y TECNOLOGÍA DE ALIMENTOS CSIC   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84891981291     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-0-387-79382-5_7     Document Type: Chapter

References (67)

1. Andrade, M. J., Rodŕiguez, M., Śanchez, B., Aranda, E., & Ćordoba, J. J. (2006). DNA typing methods for differentiation of yeasts related to dry-cured meat products. International Journal of Food Microbiology, 107, 48-58.
2. Barnett, J. A., Payne, R., & Yarrow, D. (2000). In J. A. Barnett, R. W. Payne, & D. Yarrow (Eds.), Yeasts: Characteristics and identification (3rd ed.). Cambridge: Cambridge University Press.
3. Boekhout, T., & Robert, V. (2003). Yeast in food. Beneficial and detrimental aspects. Cambridge: CRC Press.
4. Breuer, U., & Harms, H. (2006). Debaryomyces hansenii an extremophilic yeast with biotechnological potential. Yeast, 23(6), 415-437.
5. Cocolin, L., Urso, R., Rantsiou, K., Cant́on, C., & Comi, G. (2006). Dynamics and characterization of yeasts during natural fermentation of Italian sausages. FEMS Yeast Research, 6, 692-701.
6. Cong, Y. S., Yarrow, D., Li, Y. Y., & Fukuhara, H. (1994). Linear DNA plasmids from Pichia etchellsii, Debaryomyces hansenii and Wingea robertsiae. Microbiology, 140, 1327-1335.
7. Corredor, M., Davila, A.M., Casaregola, S., & Gaillardin, C. (2003). Chromosomal polymorphism in the yeast species Debaryomyces hansenii. Antonie van Leeuwenhoek, 84(2), 81-88.
8. Dalton, H. K., Board, R. G., & Davenport, R. R. (1984). The yeasts of British fresh sausage and minced beef. Antonie van Leeuwenhoek, 50, 227-248.
9. Déak, T., & Beuchat, L. R. (1996). Food spoilage yeasts. CRC Boca Rat́on, FL: Press.
10. de Llanos, R., Ferńandez-Espinar, M. T., & Querol, A. (2004). Identification of species of the genus Candida by RFLP analysis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacers. Antonie Van Leewenhoek, 85, 175-185.
11. Demain, A. L., Phaff, H. J., & Kurtzman, C. P. (1999). In C. P. Kurtzman & J. W. Fell (Eds.), The yeasts a taxonomic study. Amsterdam: Elsevier.
12. Dillon, V. M. (1998). Yeasts and moulds associated with meat and meat products. In A. Davies & R. Board (Eds.), The microbiology of meat and poultry (pp. 85-117). London: Blacie Academic and professional.
13. Dillon, V. M., & Board, R. G. (1991). Yeast associated with red meats. Journal of Applied Microbiology, 71, 93-108.
14. Duŕa, M. A., Flores, M., & Toldŕa, F. (2004a). Effect of growth phase and dry-cured sausage processing conditions on Debaryomyces spp. generation of volatile compounds from branchedchain amino acids. Food Chemistry, 86, 391-399.
15. Duŕa, M. A., Flores, M., & Toldra, F. (2004b). Effect of Debaryomyces spp. on the proteolysis of dry-fermented sausages. Meat Science, 68, 319-328.
16. Encinas, J. P., Ĺopez-D́iaz, T. M., Garćia- Ĺopez, M. L., Otero, A., & Moreno, B. (2000). Yeast populations on Spanish fermented sausages. Meat Science, 54, 203-208.
17. Esteve-zarzoso, B., Belloch, C., Uruburu, F., & Querol, A. (1999). Identification of yeast by RFLP analysis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacers. International Journal of Systematic Bacteriology, 49, 329-337.
18. Esteve-Zarzoso, B., Zorman, T., Belloch, C., & Querol, A. (2003). Molecular characterisation of the species of the genus Zygosaccharomyces. Systematic Applied Microbiology, 26, 404-411.
19. Ferńandez-Espinar, M. T., Esteve-Zarzoso, B., Querol, A., & Barrio, E. (2000). RFLP analysis of the ribosomal internal transcribed spacer and the 5.8S rRNA gene region of the genus Saccharomyces: A fast method for species identification and the differentiation of flor yeasts. Antonie Van Leeuwenhoek, 78, 87-97.
20. Ferńandez-Espinar, M. T., Martorell, P., de Llanos, R., & Querol, A. (2006). Molecular methods to identify and characterize yeast in foods and beverages. In A. Querol & G. H. Fleet (Eds.), Yeast in food and beverages. The yeast handbook (pp. 1-13). Berlin: Springer.
21. Fleet, G. H. (1990). Food spoilage yeasts. In F. F. T. Spencer & D. M. Spencer (Eds.), In yeast technology (pp. 124-166). Berlin, Heidelberg, Germany: Springer-Verlag.
22. Fleet, G. H. (2006). The commercial and community significance of yeasts in food and beverage production. In A. Querol & G. H. Fleet (Eds.). Yeast in Food and beverages. The Yeast Handbook (pp. 1-13). Berlin: Springer.
23. Flores, M., Duŕa, M. A., Marco, A., & Toldŕa, F. (2004). Effect of Debaryomyces spp. on aroma formation and sensory quality of dry-fermented sausages. Meat Science, 68, 439-446.
24. Friedman, R., & Hughes, A. L. (2001). Gene duplication and the structure of eukaryotic genomes. Genome Research, 11, 373-381.
25. Fung, D. Y. C., & Liang, C. (1990). Critical Review of isolation, detection, and identification of yeasts from meat products. CRC Critical Reviews in Food Science and Nutrition, 29, 341-379.
26. Gardini, F., Suzzi, G., Lombardi, A., Galgano, F., Crudele, M. A., Andrighetto, C., Schirone, M. & Tofalo, R. (2001). A survey of yeasts in tradicional sausages of southern Italy. FEMS Yeast Research, 161-167.
27. Golden, D. A., Beuchat, L. R., & Hitchcock, H. L. (1994). Changes in fatty acid composition of Zygosaccharomyces rouxii as influenced by solutes, potassium sorbate and incubation temperature. International Journal of Food Microbiology, 21, 293-303.
28. Grazia, L., Suzzi, G., Romano, P., & Giudici, P. (1989). The yeasts of meat products. Yeast, 5, 495-499.
29. Guerzoni, M. E., Lanciotti, R., & Marchetti, R. (1993). Survey of the physiological properties of the most frequent yeasts associated with commercial chilled foods. International Journal of Food Microbiology, 17, 329-341.
30. Guillaḿon, J. M., Sabate, J., Barrio, E., Cano, J., & Querol, A. (1998). Rapid identification of wine yeast species based on RFLP analysis of the ribosomal internal transcribed spacer ITS region. Archives of Microbiology, 169, 387-392.
31. Hammes, W. P., & Knauf, H. J. (1994). Starters in the processing of meat products. Meat Science, 36, 155-168.
32. Ismail, S. A., Deak, T., El-Rahman, H. A., Yassien, M. A., & Beuchat, L. R. (2000). Presence and changes in populations of yeasts on raw and processed poultry products stored at refrigeration temperature. International Journal of Food Microbiology, 62(1-2), 113-121.
33. James, S. A., Cai, J., Roberts, I. N., & Collins, M. D. (1997). Phylogenetic analysis of the genus Saccharomyces based on 18S rRNA gene sequences: Description of Saccharomyces kunashirensis sp. nov. and Saccharomyces martiniae sp. nov. International Journal of Systematic Bacteriology, 47, 453-460.
34. Kurtzman, C. P., & Robnett, C. J. (1998). Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit 26S ribosomal DNA partial sequences. Antonie van Leeuwenhoek, 73, 331-371.
35. Leclercq-Perlat, M. N., Corrieu, G., & Spinnler, H. E. (2004). Comparison of volatile compounds produced in model cheese medium deacidified by Debaryomyces hansenii and Kluyveromyces marxianus. Journal of Dairy Science, 87, 1545-1550.
36. Lepingle, A., Casaregola, S., Neuveglise, C., Bon, E., Nguyen, H., Artiguenave, F., et al. (2000). Genomic exploration of the hemiascomycetous yeasts: 14. Debaryomyces hansenii var. hansenii. FEBS Lett, 487, 82-86.
37. Li, W. H. (1997). Molecular evolution. Sunderland, MA: Sinauer Associates.
38. Maggi, R. G., & Govind, N. S. (2004). Regulated expression of green fluorescent protein in Debaryomyces hansenii. Journal of Industrial Microbiology and Biotechnology, 31, 301-310.
39. Mart́in, A., Ćordoba, J. J., Aranda, E., Ćordoba, M. G., & Asensio, M. A. (2006). Contribution of a selected fungal population to the volatile compounds on dry-cured ham. International Journal of Food Microbiology, 110, 8-18.
40. Mart́in, A., Ćordoba, J. J., Benito, M. J., Aranda, E., & Asensio, M. A. (2003). Effect of Penicillium chrysogenum and Debaryomyces hansenii on the volatile compounds during controlled ripening of pork loins. International Journal of Food Microbiology, 84, 327-338.
41. Martorell, P., Ferńandez-Espinar, M. T., & Querol, A. (2005). Sequence-based identification of species belonging to the genus Debaryomyces. FEMS Yeast Research, 5, 1157-1165.
42. Mattsson, R., Haemig, P. D., & Olsen, B. (1999). Feral pigeons as carriers of Cryptococcus laurentii, Cryptococcus uniguttulatus and Debaryomyces hansenii. Medical Mycology, 37, 367-369.
43. Metaxopoulos, J., Stavropoulos, S., Kakouri, A., & Samelis, J. (1996). Yeasts isolated from traditional Greek dry salami. Italian Journal of Food Science, 1, 25-32.
44. Monte, E., Villanueva, J. R., & Doḿinguez, A. (1986). Fungal profiles of Spanish country-cured hams. International Journal of Food Microbiology, 3, 355-359.
45. Muyzer, G., de Waal, E. C., & Uitterlinden, A. G. (1993). Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reactionamplified genes encoding for 16S rRNA. Applied and Environmental Microbiology, 59, 695-700.
46. Muyzer, G., & Smalla, K. (1998). Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie van Leeuwenhoek, 73, 127-14.
47. Nakase, T., Suzuki, M., Phaff, H. J., & Kurtzman, C. P. (1998). Debaryomyces Lodder & Kregervan Rij Nom. Cons. In C. P. Kurtzman & J. W. Fell (Eds.), The yeasts - A taxonomic study (pp. 157-173). Amsterdam: Elsevier.
48. Nishikawa, A., Tomomatsu, H., Sugita, T., Ikeda, R., & Shinoda, T. (1996). Taxonomic position of clinical isolates of Candida famata. Journal of Medical and Veterinary Mycology, 34, 411-419.
49. Nortje, G. L., Nel, L., Jordaan, E., Badenhorst, K., Goedhart, E., & Holzapfel, W. H. (1990). The aerobic psychrotrophic populations on meat and meat contact surfaces in a meat production system and on meat stored at chill temperature. The Journal of Applied Bacteriology, 68, 335-344.
50. Ńũnez, F., Rodŕiguez, M. M., Ćordoba, J. J., Berḿudez, M. E., & Asensio, M. A. (1996). Yeast population during ripening of dry-cured Iberian ham. International Journal of Food Microbiology, 29, 271-280.
51. Petersen, K. M., Westall, S., & Jespersen, L. (2002). Microbial succession of Debaryomyces hansenii strains during the production of Danish surfaced-ripened cheeses. Journal of Dairy Science, 85, 478-486.
52. Prista, C., Almagro, A., Loureiro-Dias, M. C., & Ramos, J. (1997). Physiological basis for the high salt tolerance of Debaryomyces hansenii. Applied and Environmental Microbiology, 63, 4005-4009.
53. Prista, C., Loureiro-Dias, M. C., Montiel, V., Garćia, R., & Ramos, J. (2005). Mechanisms underlying the halotolerant way of Debaryomyces hansenii. FEMS Yeast Research, 5, 693-701.
54. Querol, A., Belloch, C., Ferńandez-Espinar, M. T., & Barrio, E. (2003). Molecular evolution in yeast of biotechnological interest. International Microbiology, 6, 201-205.
55. Quiros, M., Martorell, P., Valderrama, M. J., Querol, A., Peinado, J. M., & de Siĺoniz, M. I. (2006). PCR-RFLP analysis of the IGS region of rDNA: A useful tool for the practical discrimination between species of the genus Debaryomyces. Antonie Van Leeuwenhoe, 90(3), 211-219.
56. Ramos, J. P., Valente, P., Hagler, A. N., & Leoncini, O. (1998). Restriction analysis of ITS region for characterization of the Debaryomyces species. The Journal of General and Applied Microbiology, 44, 399-404.
57. Rantsiou, K., Iacumin, L., Cantoni, C., Cattaneo, P., Comi, G., & Cocolin, L. (2005). Applied and Environmental Microbiology, 71, 1977-1986.
58. Romano, P., Capece, A., & Jespersen, L. (2006). Taxonomic and ecological diversity of food and beverages yeasts. In A. Querol & G. H. Fleet (Eds.), Yeast in food and beverages. The yeast handbook (pp. 13-55). Berlin: Springer.
59. Samelis, J., & Sofos, J. (2003). Yeast in meat and meat products. In T. Boekhout & V. Robert. Yeasts in food, beneficial and detrimental aspects (pp. 234-265). Hamburg, Germany Behr's: Verlag Gmbh & Co.
60. Samelis, J., Stavropoulos, S., Kakouri, A., & Metaxopoulos, J. (1994). Quantification and characterization of microbial population associated with naturally fermented Greek dry salami. Food Microbiology, 11, 447-460.
61. Selgas, M. D., & Garćia, M. L. (2007). Starter cultures: Yeasts. In F. Toldŕa, Y. H. Hui, I. Astiasar ́an, W. K. Nip, J. G. Sebranek, E. T. F. Silveira, L. H. Stahnke, & R. Talon (Eds.), Handbook of fermented meat and poultry (pp. 159-169), Ames, Iowa: Blackwell Publishing.
62. Sinigaglia, M., Lanciotti, R., & Guerzoni, M. E. (1994). Biological and physiological characteristics of Yarrowia lipolytica strains in relation to isolation source. Canadian Journal of Microbiology, 40, 54-59.
63. Swiss Agency for the Environment, Forests and Landscape (SAEFL). (2004). Guideline classifications of organisms: Fungi. Berne, Switzerland: SAEFL.
64. Toldŕa, F. (1988). Proteolysis and lypolisis in flavour development of dry-cured meat products. Meat Science, 65, 935-948.
65. Viljoen, B. C., Dykes, G. A., Collis, M., & von Holy, A. (1993). Yeasts associated with Vienna sausage packaging. International Journal of Food Microbiology, 18, 53-62.
66. Wong, B., Kiehn, T. E., Edwards, F., Bernard, E. M., Marcove, R. C., de Harven, E., et al. (1982). Bone infection caused by Debaryomyces hansenii in a normal host: A case report. Journal of Clinical Microbiology, 16, 545-548.
67. Yamamoto, Y., Osanai, S., Fujiuchi, S., Yamazaki, K., Nakano, H., Ohsaki, Y., et al. (2002). Extrinsic allergic alveolitis induced by the yeast Debaryomyces hansenii. The European Respiratory Journal, 20, 1351-1353.