The microbiome and development: A mother's perspective

Seminars in Reproductive Medicine

Volumn 32, Issue 1, 2014, Pages 14-22

  Prince, Amanda L ^a   Antony, Kathleen M ^a   Ma, Jun ^a   Aagaard, Kjersti M ^a  

^a BAYLOR COLLEGE OF MEDICINE   (United States)

Author keywords

Human Microbiome Project (HMP) consortium; microbiome; pregnancy

Indexed keywords

BACTERIAL RNA; INTERLEUKIN 6; INTERLEUKIN 8; RNA 16S;

ACTINOMYCETALES; ARTICLE; BACTERIAL COLONIZATION; CLOSTRIDIALES; CYTOKINE PRODUCTION; DELIVERY; DYSBIOSIS; FAECALIBACTERIUM; HUMAN; IMMUNE RESPONSE; IMMUNE SYSTEM; LACTOBACILLUS; MICROBIOME; NEISSERIA GONORRHOEAE; NONHUMAN; PLACENTA; PREGNANCY; PREMATURE LABOR; VERTICAL TRANSMISSION; CHILD DEVELOPMENT; FEMALE; MICROBIOLOGY; MICROFLORA; MOTHER; NEWBORN; PHYSIOLOGY; PREMATURITY;

CHILD DEVELOPMENT; FEMALE; HUMANS; INFANT, NEWBORN; MICROBIOTA; MOTHERS; PLACENTA; PREGNANCY; PREMATURE BIRTH;

EID: 84891751072     PISSN: 15268004     EISSN: 15264564     Source Type: Journal    
DOI: 10.1055/s-0033-1361818     Document Type: Article

References (68)

1. Larsen N., Vogensen F. K., van den Berg F. WJ., et al. Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults. PLoS ONE: 2010; 5 2 e9085
2. Wu X., Ma C., Han L., et al. Molecular characterisation of the faecal microbiota in patients with type II diabetes. Curr Microbiol: 2010; 61 1 69 78
3. Qin J., Li Y., Cai Z., et al. A metagenome-wide association study of gut microbiota in type 2 diabetes. Nature: 2012; 490 7418 55 60
4. Cani P. D., Neyrinck A. M., Fava F., et al. Selective increases of bifidobacteria in gut microflora improve high-fat-diet-induced diabetes in mice through a mechanism associated with endotoxaemia. Diabetologia: 2007; 50 11 2374 2383 (Pubitemid 47512397)
5. Turnbaugh P. J., Ley R. E., Mahowald M. A., Magrini V., Mardis E. R., Gordon J. I. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature: 2006; 444 7122 1027 1031 (Pubitemid 46018515)
6. Joossens M., Huys G., Cnockaert M., et al. Dysbiosis of the faecal microbiota in patients with Crohn's disease and their unaffected relatives. Gut: 2011; 60 5 631 637
7. Wang T., Cai G., Qiu Y., et al. Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteers. ISME J: 2012; 6 2 320 329
8. Bäckhed F., Manchester J. K., Semenkovich C. F., Gordon J. I. Mechanisms underlying the resistance to diet-induced obesity in germ-free mice. Proc Natl Acad Sci U S A: 2007; 104 3 979 984 (Pubitemid 46154722)
9. Ley R. E., Bäckhed F., Turnbaugh P., Lozupone C. A., Knight R. D., Gordon J. I. Obesity alters gut microbial ecology. Proc Natl Acad Sci U S A: 2005; 102 31 11070 11075 (Pubitemid 41105994)
10. Turnbaugh P. J., Bäckhed F., Fulton L., Gordon J. I. Diet-induced obesity is linked to marked but reversible alterations in the mouse distal gut microbiome. Cell Host Microbe: 2008; 3 4 213 223 (Pubitemid 351494716)
11. Turnbaugh P. J., Hamady M., Yatsunenko T., et al. A core gut microbiome in obese and lean twins. Nature: 2009; 457 7228 480 484
12. Schwiertz A., Taras D., Schäfer K., et al. Microbiota and SCFA in lean and overweight healthy subjects. Obesity (Silver Spring): 2010; 18 1 190 195
13. Sobhani I., Tap J., Roudot-Thoraval F., et al. Microbial dysbiosis in colorectal cancer (CRC) patients. PLoS ONE: 2011; 6 1 e16393
14. Lepage P., Häsler R., Spehlmann M. E., et al. Twin study indicates loss of interaction between microbiota and mucosa of patients with ulcerative colitis. Gastroenterology: 2011; 141 1 227 236
15. Manichanh C., Rigottier-Gois L., Bonnaud E., et al. Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach. Gut: 2006; 55 2 205 211 (Pubitemid 43117279)
16. Willing B., Halfvarson J., Dicksved J., et al. Twin studies reveal specific imbalances in the mucosa-associated microbiota of patients with ileal Crohn's disease. Inflamm Bowel Dis: 2009; 15 5 653 660
17. Mangin I., Bonnet R., Seksik P., et al. Molecular inventory of faecal microflora in patients with Crohn's disease. FEMS Microbiol Ecol: 2004; 50 1 25 36 (Pubitemid 39265393)
18. Gophna U., Sommerfeld K., Gophna S., Doolittle W. F., Veldhuyzen van Zanten S. JO. Differences between tissue-associated intestinal microfloras of patients with Crohn's disease and ulcerative colitis. J Clin Microbiol: 2006; 44 11 4136 4141 (Pubitemid 44737260)
19. Aagaard K., Petrosino J., Keitel W., et al. The Human Microbiome Project strategy for comprehensive sampling of the human microbiome and why it matters. FASEB J: 2013; 27 3 1012 1022
20. Human Microbiome Project Consortium Structure, function and diversity of the healthy human microbiome. Nature: 2012; 486 7402 207 214
21. Human Microbiome Project Consortium A framework for human microbiome research. Nature: 2012; 486 7402 215 221
22. Huse S. M., Ye Y., Zhou Y., Fodor A. A. A core human microbiome as viewed through 16S rRNA sequence clusters. PLoS ONE: 2012; 7 6 e34242
23. Jumpstart Consortium Human Microbiome Project Data Generation Working Group Evaluation of 16S rDNA-based community profiling for human microbiome research. PLoS ONE: 2012; 7 6 e39315
24. Li K., Bihan M., Yooseph S., Methé B. A. Analyses of the microbial diversity across the human microbiome. PLoS ONE: 2012; 7 6 e32118
25. Aagaard K., Riehle K., Ma J., et al. A metagenomic approach to characterization of the vaginal microbiome signature in pregnancy. PLoS ONE: 2012; 7 6 e36466
26. Koren O., Goodrich J. K., Cullender T. C., et al. Host remodeling of the gut microbiome and metabolic changes during pregnancy. Cell: 2012; 150 3 470 480
27. Schultz M., Göttl C., Young R. J., Iwen P., Vanderhoof J. A. Administration of oral probiotic bacteria to pregnant women causes temporary infantile colonization. J Pediatr Gastroenterol Nutr: 2004; 38 3 293 297
28. Spurbeck R. R., Arvidson C. G. Lactobacillus jensenii surface-associated proteins inhibit Neisseria gonorrhoeae adherence to epithelial cells. Infect Immun: 2010; 78 7 3103 3111
29. Hillier S. L., Krohn M. A., Klebanoff S. J., Eschenbach D. A. The relationship of hydrogen peroxide-producing lactobacilli to bacterial vaginosis and genital microflora in pregnant women. Obstet Gynecol: 1992; 79 3 369 373
30. Atashili J., Poole C., Ndumbe P. M., Adimora A. A., Smith J. S. Bacterial vaginosis and HIV acquisition: a meta-analysis of published studies. AIDS: 2008; 22 12 1493 1501
31. Pridmore R. D., Berger B., Desiere F., et al. The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533. Proc Natl Acad Sci U S A: 2004; 101 8 2512 2517 (Pubitemid 38269342)
32. Collado M. C., Isolauri E., Laitinen K., Salminen S. Distinct composition of gut microbiota during pregnancy in overweight and normal-weight women. Am J Clin Nutr: 2008; 88 4 894 899
33. Mukhopadhya I., Hansen R., El-Omar E. M., Hold G. L. IBD-what role do Proteobacteria play? Nat Rev Gastroenterol Hepatol: 2012; 9 4 219 230
34. Sokol H., Pigneur B., Watterlot L., et al. Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients. Proc Natl Acad Sci U S A: 2008; 105 43 16731 16736
35. Dominguez-Bello M. G., Costello E. K., Contreras M., et al. Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns. Proc Natl Acad Sci U S A: 2010; 107 26 11971 11975
36. Biasucci G., Benenati B., Morelli L., Bessi E., Boehm G. Cesarean delivery may affect the early biodiversity of intestinal bacteria. J Nutr: 2008; 138 9 1796S 1800S
37. Azad M. B., Konya T., Maughan H., et al. CHILD Study Investigators. Gut microbiota of healthy Canadian infants: profiles by mode of delivery and infant diet at 4 months. CMAJ: 2013; 185 5 385 394
38. Penders J., Thijs C., Vink C., et al. Factors influencing the composition of the intestinal microbiota in early infancy. Pediatrics: 2006; 118 2 511 521 (Pubitemid 46085405)
39. Grönlund M. MM, Salminen S. S., Mykkänen H. H., Kero P. P., Lehtonen O. PO. Development of intestinal bacterial enzymes in infants - relationship to mode of delivery and type of feeding. APMIS: 1999; 107 7 655 660
40. Kero J. J., Gissler M. M., Grönlund M-MM., et al. Mode of delivery and asthma - is there a connection? Pediatr Res: 2002; 52 1 6 11 (Pubitemid 34665943)
41. van Nimwegen F. A., Penders J., Stobberingh E. E., et al. Mode and place of delivery, gastrointestinal microbiota, and their influence on asthma and atopy. J Allergy Clin Immunol: 2011; 128 5 948 955, e1-e3
42. Grönlund M. M., Nuutila J., Pelto L., et al. Mode of delivery directs the phagocyte functions of infants for the first 6 months of life. Clin Exp Immunol: 1999; 116 3 521 526 (Pubitemid 29258106)
43. Oyama N., Sudo N., Sogawa H., Kubo C. Antibiotic use during infancy promotes a shift in the T(H)1/T(H)2 balance toward T(H)2-dominant immunity in mice. J Allergy Clin Immunol: 2001; 107 1 153 159 (Pubitemid 32105259)
44. Sudo N., Yu X. N., Aiba Y., et al. An oral introduction of intestinal bacteria prevents the development of a long-term Th2-skewed immunological memory induced by neonatal antibiotic treatment in mice. Clin Exp Allergy: 2002; 32 7 1112 1116 (Pubitemid 34779611)
45. La Tuga M. S., Stuebe A., Seed P. A review of the source and function of microbiota in breast milk. Semin Reprod Med: 2014; 35 1 68 73
46. Simmons L. E., Rubens C. E., Darmstadt G. L., Gravett M. G. Preventing preterm birth and neonatal mortality: exploring the epidemiology, causes, and interventions. Semin Perinatol: 2010; 34 6 408 415
47. Goldenberg R. L., Hauth J. C., Andrews W. W. Intrauterine infection and preterm delivery. N Engl J Med: 2000; 342 20 1500 1507 (Pubitemid 30318275)
48. Gonçalves L. F., Chaiworapongsa T., Romero R. Intrauterine infection and prematurity. Ment Retard Dev Disabil Res Rev: 2002; 8 1 3 13 (Pubitemid 34754487)
49. Mulla M. J., Myrtolli K., Tadesse S., et al. Cutting-edge report: TLR10 plays a role in mediating bacterial peptidoglycan-induced trophoblast apoptosis. Am J Reprod Immunol: 2013; 69 5 449 453
50. Abrahams V. M., Bole-Aldo P., Kim Y. M., et al. Divergent trophoblast responses to bacterial products mediated by TLRs. J Immunol: 2004; 173 7 4286 4296 (Pubitemid 39280656)
51. Nold C., Anton L., Brown A., Elovitz M. Inflammation promotes a cytokine response and disrupts the cervical epithelial barrier: a possible mechanism of premature cervical remodeling and preterm birth. Am J Obstet Gynecol: 2012; 206 3 e1 e7
52. Han Y. W., Shen T., Chung P., Buhimschi I. A., Buhimschi C. S. Uncultivated bacteria as etiologic agents of intra-amniotic inflammation leading to preterm birth. J Clin Microbiol: 2009; 47 1 38 47
53. Greig P. C., Herbert W. N., Robinette B. L., Teot L. A. Amniotic fluid interleukin-10 concentrations increase through pregnancy and are elevated in patients with preterm labor associated with intrauterine infection. Am J Obstet Gynecol: 1995; 173 4 1223 1227
54. Christiansen O. B. Reproductive immunology. Mol Immunol: 2013; 55 1 8 15
55. Zenclussen A. C. Adaptive immune responses during pregnancy. Am J Reprod Immunol: 2013; 69 4 291 303
56. Martinez F. F., Cervi L., Knubel C. P., Panzetta-Dutari G. M., Motran C. C. The role of pregnancy-specific glycoprotein 1a (PSG1a) in regulating the innate and adaptive immune response. Am J Reprod Immunol: 2013; 69 4 383 394
57. Douvier S., Neuwirth C., Filipuzzi L., Kisterman J. P. Chorioamnionitis with intact membranes caused by Capnocytophaga sputigena. Eur J Obstet Gynecol Reprod Biol: 1999; 83 1 109 112 (Pubitemid 29101582)
58. Han Y. W., Ikegami A., Bissada N. F., Herbst M., Redline R. W., Ashmead G. G. Transmission of an uncultivated Bergeyella strain from the oral cavity to amniotic fluid in a case of preterm birth. J Clin Microbiol: 2006; 44 4 1475 1483
59. Bearfield C., Davenport E. S., Sivapathasundaram V., Allaker R. P. Possible association between amniotic fluid micro-organism infection and microflora in the mouth. BJOG: 2002; 109 5 527 533 (Pubitemid 37337993)
60. Han Y. WY, Redline R. WR, Li M. M., Yin L. L., Hill G. BG, McCormick T. ST. Fusobacterium nucleatum induces premature and term stillbirths in pregnant mice: implication of oral bacteria in preterm birth. Infect Immun: 2004; 72 4 2272 2279 (Pubitemid 38419943)
61. Fardini Y., Chung P., Dumm R., Joshi N., Han Y. W. Transmission of diverse oral bacteria to murine placenta: evidence for the oral microbiome as a potential source of intrauterine infection. Infect Immun: 2010; 78 4 1789 1796
62. Sood R., Zehnder J. L., Druzin M. L., Brown P. O. Gene expression patterns in human placenta. Proc Natl Acad Sci U S A: 2006; 103 14 5478 5483
63. Romero R., Schaudinn C., Kusanovic J. P., et al. Detection of a microbial biofilm in intraamniotic infection. Am J Obstet Gynecol: 2008; 198 1 e1 e5
64. Steel J. H., Malatos S., Kennea N., et al. Bacteria and inflammatory cells in fetal membranes do not always cause preterm labor. Pediatr Res: 2005; 57 3 404 411 (Pubitemid 40293609)
65. Stout M. J., Conlon B., Landeau M., et al. Identification of intracellular bacteria in the basal plate of the human placenta in term and preterm gestations. Am J Obstet Gynecol: 2013; 208 3 e1 e7
66. Chaim W., Mazor M. Intraamniotic infection with fusobacteria. Arch Gynecol Obstet: 1992; 251 1 1 7
67. Hill G. B. Preterm birth: associations with genital and possibly oral microflora. Ann Periodontol: 1998; 3 1 222 232
68. Treiner E., Duban L., Bahram S., et al. Selection of evolutionarily conserved mucosal-associated invariant T cells by MR1. Nature: 2003; 422 6928 164 169 (Pubitemid 36362748)