Concepts of epidemiology of forest diseases

Infectious Forest Diseases

Volumn , Issue , 2013, Pages 1-28

  Oliva, Jonàs ^a   Boberg, Johanna B ^a   Hopkins, Anna J M ^a   Stenlid, Jan ^a  

^a SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

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EID: 84890782517     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter

References (95)

1. Agrios, G.N. (2005) Plant Pathology, 5th edn. Academic Press, New York.
2. Auclair, A.N.D., Worrest, R.C., Lachance, D. and Martin, H.C. (1992) Climatic perturbation as a general mechanism of forest dieback. In: Manion, P.D. and Lachance, D. (eds) Forest Decline Concepts. APS Press, St Paul, Minnesota, pp. 38-58.
3. Bell, T., Freckleton, R.P. and Lewis, O.T. (2006) Plant pathogens drive density-dependent seedling mortality in a tropical tree. Ecology Letters 9, 569-574.
4. Berglund, H., Hottola, J., Penttilä, R. and Siitonen, J. (2011) Linking substrate and habitat requirements of wood-inhabiting fungi to their regional extinction vulnerability. Ecography 34, 864-875.
5. Bergot, M., Cloppet, E., Pérarnaud, V., Déqué, M., Marçais, B. and Desprez-Loustau, M.-L. (2004) Simulation of potential range expansion of oak disease caused by Phytophthora cinnamomi under climate change. Global Change Biology 10, 1539-1552.
6. Blaschke, M. and Cech, T.L. (2007) Absterbende Weisskiefern - eine langfristige Folge des Trockenjahres 2003? [Declining Scots pines: a consequence of the drought in 2003?]. Forstschutz Aktuell 40, 32-34.
7. Blodgett, J.T., Herms, D.A. and Bonello, P. (2005) Effects of fertilization on red pine defense chemistry and resistance to Sphaeropsis sapinea. Forest Ecology and Management 208, 373-382.
8. Brasier, C.M. (1988) Rapid changes in genetic structure of epidemic populations of Ophiostoma ulmi. Nature 332, 538-541.
9. Brasier, C.M. (1991) Ophiostoma novo-ulmi sp. nov., causative agent of current Dutch elm disease pandemics. Mycopathologia 115, 151-161.
10. Brasier, C.M. and Scott, J.K. (1994) European oak declines and global warming: a theoretical assessment with special reference to the activity of Phytophthora cinnamomi. EPPO Bulletin 24, 221-232.
11. Chou, C.K.S. and MacKenzie, M. (1988) Effect of pruning intensity and season on Diplodia pinea infection of Pinus radiata stem through pruning wounds. European Journal of Forest Pathology 18, 437-444.
12. Cobb, R.C., Meentemeyer, R.K. and Rizzo, D.M. (2010) Apparent competition in canopy trees determined by pathogen transmission rather than susceptibility. Ecology 91, 327-333.
13. Crane, P.E., Hopkins, A.J.M., Dick, M.A. and Bulman, L.S. (2009) Behaviour of Neonectria fuckeliana causing a pine canker disease in New Zealand. Canadian Journal of Forest Research 39, 2119-2128.
14. Cruickshank, M.G., Morrison, D.J. and Lalumière, A. (2011) Site, plot, and individual tree yield reduction of interior Douglas-fir associated with non-lethal infection by Armillaria root disease in southern British Columbia. Forest Ecology and Management 261, 297-307.
15. Desprez-Loustau, M.-L., Marçais, B., Nageleisen, L.-M., Piou, D. and Vannini, A. (2006) Interactive effects of drought and pathogens in forest trees. Annals of Forest Science 63, 597-612.
16. Develey-Rivière, M.-P. and Galiana, E. (2007) Resistance to pathogens and host developmental stage: a multifaceted relationship within the plant kingdom. New Phytologist 175, 405-416.
17. Elith, J. et al. (2006) Novel methods improve prediction of species' distributions from occurrence data. Ecography 29, 129-151.
18. Eyles, A., Bonello, P., Ganley, R. and Mohammed, C. (2010) Induced resistance to pests and pathogens in trees. New Phytologist 185, 893-908.
19. Fitt, B.D.L., Gregory, P.H., Todd, A.D., McCartney, H.A. and Macdonald, O.C. (1987) Spore dispersal and plant disease gradients; a comparison between two empirical models. Journal of Phytopathology 118, 227-242.
20. Frankel, S. (1998) User's Guide to the Western Root Disease Model, Version 3.0. General Technical Report No. PSW-GTR-165, US Department of Agriculture, Forest Service, Pacific Southwest Research Station, Berkeley, California.
21. Frantzen, J. and van den Bosch, F. (2000) Spread of organisms: can travelling and dispersive waves be distinguished?. Basic and Applied Ecology 1, 83-92.
22. Friesen, T.L., Faris, J.D., Solomon, P.S. and Oliver, R.P. (2008) Host-specific toxins: effectors of necrotrophic pathogenicity. Cellular Microbiology 10, 1421-1428.
23. Gadgil, P.D. (1984) Dothistroma needle blight. In: Gadgil, P.D. (ed.) Forest Pathology in New Zealand. New Zealand Forest Research Institute, Rotorua, New Zealand.
24. Ganley, R.J., Sniezko, R.A. and Newcombe, G. (2008) Endophyte-mediated resistance against white pine blister rust in Pinus monticola. Forest Ecology and Management 255, 2751-2760.
25. Ganley, R.J., Watt, M.S., Kriticos, D.J., Hopkins, A.J.M. and Manning, L.K. (2011) Increased risk of pitch canker to Australasia under climate change. Australasian Plant Pathology 40, 228-237.
26. Garrett, S.D. (1956a) Biology of Root-Infecting Fungi. Cambridge University Press, Cambridge, UK.
27. Garrett, S.D. (1956b) Rhizomorph behaviour in Armillaria mellea (Vahl) Quél. II. Logistics of infection. Annals of Botany 20, 193-209.
28. Gilbert, G.S. (2002) Evolutionary ecology of plant diseases in natural ecosystems. Annual Review of Phytopathology 40, 13-43.
29. Gilmour, J.W. (1981) The effect of season on infection of Pinus radiata by Dothistroma pini. European Journal of Forest Pathology 11, 265-269.
30. Gravatt, F. (1949) Chestnut blight in Asia and North America. Unasylva 3, 3-7.
31. Haddow, W.R. (1938) The disease caused by Trametes pini (Thore) Fries in white pine (Pinus strobus L.). Transactions of the Royal Canadian Institute 22, 21-80.
32. Hansen, E.M. and Goheen, E.M. (2000) Phellinus weirii and other native root pathogens as determinants of forest structure and process in western North America. Annual Review of Phytopathology 38, 515-539.
33. Hansen, E.M., Parke, J.L. and Sutton, W. (2005) Susceptibility of Oregon forest trees and shrubs to Phytophthora ramorum: a comparison of artificial inoculation and natural infection. Plant Disease 89, 63-70.
34. Hijmans, R.J. and Graham, C.H. (2006) The ability of climate envelope models to predict the effect of climate change on species distributions. Global Change Biology 12, 2272-2281.
35. Hille Ris Lambers, J., Clark, J.S. and Beckage, B. (2002) Density-dependent mortality and the latitudinal gradient in species diversity. Nature 417, 732-735.
36. Holdenrieder, O. and Greig, B.J.W. (1998) Biological methods of control. In: Woodward, S., Stenlid, J., Karjalainen, R. and Hüttermann, A. (eds) Heterobasidion annosum: Biology, Ecology, Impact and Control. CAB International, Wallingford, UK, pp. 235-258.
37. Houston, D.R. (1992) A host-stress-saprogen model for forest dieback-decline diseases. In: Manion, P.D. and Lachance, D. (eds) Forest Decline Concepts. APS Press, St Paul, Minnesota, pp. 3-25.
38. Hulme, P.E. (2003) Biological invasions: winning the science battles but losing the conservation war?. Oryx 37, 178-193.
39. Hunt, R.S. and Sickle, G.A.V. (1984) Variation in susceptibility to sweet fern rust among Pinus contorta and P. banksiana. Canadian Journal of Forest Research 14, 672-675.
40. Isomäki, A. and Kallio, T. (1974) Consequences of injury caused by timber harvesting machines on the growth and decay of spruce (Picea abies (L.) Karst.). Acta Forestalia Fennica 136, 1-24.
41. Jalaluddin, M. (1967) Studies on Rhizina undulata: I. Mycelial growth and ascospore germination. Transactions of the British Mycological Society 50, 449-459.
42. Kearney, M. and Porter, W. (2009) Mechanistic niche modelling: combining physiological and spatial data to predict species' ranges. Ecology Letters 12, 334-350.
43. Király, L., Barna, B. and Király, Z. (2007) Plant resistance to pathogen infection: forms and mechanisms of innate and acquired resistance. Journal of Phytopathology 155, 385-396.
44. Kleczkowski, A., Gilligan, C.A. and Bailey, D.J. (1997) Scaling and spatial dynamics in plant-pathogen systems: from individuals to populations. Biological Sciences 264, 979-984.
45. Koricheva, J., Vehvilainen, H., Riihimaki, J., Ruohomaki, K., Kaitaniemi, P. and Ranta, H. (2006) Diversification of tree stands as a means to manage pests and diseases in boreal forests: myth or reality?. Canadian Journal of Forest Research 36, 324-336.
46. Lang, K.J. (1987) Dothistroma pini on young Norway spruce (Picea abies). European Journal of Forest Pathology 17, 316-317.
47. Lei, Z.P., Jin, J.R and Wang, C.W. (1995) Antagonism between ectomycorrhizal fungi and plant pathogens. In: Brundett, M., Dell, B., Malajczuk, N. and Gong, M.Q. (eds) Mycorrhizas for Plantation Forestry in Asia. ACIAR Proceedings Series 62, 77-81.
48. Leonard, K.J. and Czochor, R.J. (1980) Theory of genetic interactions among populations of plants and their pathogens. Annual Review of Phytopathology 18, 237-258.
49. Levine, J.M. and D'Antonio, C.M. (2003) Forecasting biological invasions with increasing international trade. Conservation Biology 17, 322-326.
50. Lopez-Zamora, I., Bliss, C., Jokela, E.J., Comerford, N.B., Grunwald, S., Barnard, E. and Vasquez, G.M. (2007) Spatial relationships between nitrogen status and pitch canker disease in slash pine planted adjacent to a poultry operation. Environmental Pollution 147, 101-111.
51. Lygis, V., Vasiliauskas, R. and Stenlid, J. (2005) Clonality in the postfire root rot ascomycete Rhizina undulata. Mycologia 97, 788-792.
52. Madden, L.V., Hughes, G. and van den Bosch, F. (2007) The Study of Plant Disease Epidemics. APS Press, St Paul, Minnesota.
53. Manion, P.D. (1981) Tree Disease Concepts. Prentice Hall, Englewood Cliffs, New Jersey.
54. Manion, P.D. and Griffin, D.H. (2001) Large landscape scale analysis of tree death in the Adirondack Park, New York. Forest Science 47, 542-549.
55. Matson, P.A. and Waring, R.H. (1984) Effects of nutrient and light limitation on mountain hemlock: susceptibility to laminated root rot. Ecology 65, 1517-1524.
56. Mattila, U. (2005) Probability models for pine twisting rust (Melampsora pinitorqua) damage in Scots pine (Pinus sylvestris) stands in Finland. Forest Pathology 35, 9-21.
57. Mattila, U., Jalkanen, R. and Nikula, A. (2001) The effects of forest structure and site characteristics on probability of pine twisting rust damage in young Scots pine stands. Forest Ecology and Management 142, 89-97.
58. McNew, L. (1960) The nature, origin, and evolution of parasitism. In: Horsfall, J.G. and Dimond, A.E. (eds) Plant Pathology - An Advanced Treatise. Academic Press, New York, pp. 19-69.
59. Meadows, I.M., Zwart, D.C., Jeffers, S.N., Waldrop, T.A. and Bridges, W.C. (2011) Effects of fuel reduction treatments on incidence of Phytophthora species in soil of a southern Appalachian mountain forest. Plant Disease 95, 811-820.
60. Menges, E.S. and Loucks, O.L. (1984) Modeling a disease-caused patch disturbance: oak wilt in the midwestern United States. Ecology 65, 487-498.
61. Morrison, D.J., Wallis, G.W. and Weir, L.C. (1988) Control of Armillaria and Phellinus Root Diseases: 20-year Results from the Skimikin Stump Removal Experiment. Information Report BC-X-302, Forestry Canada, Pacific and Yukon Region, Victoria, BC, Canada.
62. Mueller-Dombois, D. (1992) A natural dieback theory, cohort senescence as an alternative to the decline disease theory. In: Manion, P.D. and Lachance, D. (eds) Forest Decline Concepts. APS Press, St Paul, Minnesota, pp. 26-37.
63. Mundt, C.C., Sackett, K.E., Wallace, L.D., Cowger, C. and Dudley, J.P. (2009) Long-distance dispersal and accelerating waves of disease: empirical relationships. American Naturalist 173, 456-466.
64. Oliva, J. and Stenlid, J. (2011) Validation of the Rotstand model for simulating Heterobasidion annosum root rot in Picea abies stands. Forest Ecology and Management 261, 1841-1851.
65. Oliva, J., Thor, M. and Stenlid, J. (2010) Long term effects of mechanized stump treatment against Heterobasidion annosum s.l. root rot in Picea abies. Canadian Journal of Forest Research 40, 1020-1033.
66. Olson, A. and Stenlid, J. (2002) Pathogenic fungal species hybrids infecting plants. Microbes and Infection 4, 1353-1359.
67. Ostry, M.E., Venette, R.C. and Juzwik, J. (2011) Decline as a disease category: is it helpful?. Phytopathology 101, 404-409.
68. Pautasso, M., Holdenrieder, O. and Stenlid, J. (2005) Susceptibility to fungal pathogens of forests differing in tree diversity. In: Scherer-Lorenzen, M., Körner, C. and Schulze, E.D. (eds) Forest Diversity and Function: Temperate and Boreal Systems. Ecological Studies 176, Springer, Berlin, pp. 263-289.
69. Pukkala, T., Möykkynen, T., Thor, M., Rönnberg, J. and Stenlid, J. (2005) Modeling infection and spread of Heterobasidion annosum in even-aged Fennoscandian conifer stands. Canadian Journal of Forest Research 35, 74-84.
70. Redfern, D.B. and Stenlid, J. (1998) Spore dispersal and infection. In: Woodward, S., Stenlid, J., Karjalainen, R. and Hüttermann, A. (eds) Heterobasidion annosum: Biology, Ecology, Impact and Control. CAB International, Wallingford, UK, pp. 105-124.
71. Roll-Hansen, F., Roll-Hansen, H. and Skroppa, T. (1992) Gremmeniella abietina, Phacidium infestans, and other causes of damage in alpine, young pine plantations in Norway. European Journal of Forest Pathology 22, 77-94.
72. Scholthof, K.B.G. (2007) The disease triangle: pathogens, the environment and society. Nature Reviews Microbiology 5, 152-156.
73. Schumann, G.L. (1991) Plant Diseases: Their Biology and Social Impact. APS Press, St Paul, Minnesota.
74. Seem, R.C. (1984) Disease incidence and severity relationships. Annual Review of Phytopathology 22, 133-150.
75. Shearer, B.L., Dillon, M.J., Kinal, J. and Buehrig, R.M. (2010) Temporal and spatial soil inoculum dynamics following Phytophthora cinnamomi invasion of Banksia woodland and Eucalyptus marginata forest biomes of south-western Australia. Australasian Plant Pathology 39, 293-311.
76. Sinclair, W.A. and Hudler, G.W. (1988) Tree declines: four concepts of causality. Journal of Arboriculture 14, 29-35.
77. Sinclair, W.A. and Lyon, H.H. (2005) Diseases of Trees and Shrubs. Cornell University Press, New York.
78. Skre, O. (1979) The regional distribution of vascular plants in Scandinavia with requirements for high summer temperatures. Norwegian Journal of Botany 26, 295-318.
79. Stenlid, J. and Redfern, D.B. (1998) Spread within the tree and stand. In: Woodward, S., Stenlid, J., Karjalainen, R. and Hüttermann, A. (eds) Heterobasidion annosum: Biology, Ecology, Impact and Control. CAB International, Wallingford, UK, pp. 125-141.
80. Storer, A.J., Gordon, T.R. and Clark, S.L. (1998) Association of the pitch canker fungus, Fusarium subglutinans f.sp. pini, with Monterey pine seeds and seedlings in California. Plant Pathology 47, 649-656.
81. Sutherst, R.W., Maywald, G.F. and Kriticos, D.J. (2007) CLIMEX version 3: user's guide. Hearne Scientific Software Pty Ltd., Melbourne, Australia. Available from: www.hearne.com.au (accessed 19 November 2012).
82. Tainter, F.H. and Baker, F.A. (1996) Principles of Forest Pathology. John Wiley, Hoboken, New Jersey.
83. Thomsen, I.M. (2009) Precipitation and temperature as factors in Gremmeniella abietina epidemics. Forest Pathology 39, 56-72.
84. Thor, M., Ståhl, G. and Stenlid, J. (2005) Modelling root rot incidence in Sweden using tree, site and stand variables. Scandinavian Journal of Forest Research 20, 165-176.
85. Thor, M., Arlinger, J.D. and Stenlid, J. (2006) Heterobasidion annosum root rot in Picea abies: modelling economic outcomes of stump treatment in Scandinavian coniferous forests. Scandinavian Journal of Forest Research 21, 414-423.
86. Uotila, A. (1990) Infection of pruning wounds in Scots pine by Phacidium coniferarum and selection of pruning season. Acta Forestalia Fennica 215, 1-36.
87. van der Plank, J.E. (1963) Plant Diseases: Epidemics and Control. Academic Press, New York.
88. van der Plank, J.E. (1975) Principles of Plant Infection. Academic Press, New York.
89. van Maanen, A. and Xu, X.-M. (2003) Modelling plant disease epidemics. European Journal of Plant Pathology 109, 669-682.
90. Vasiliauskas, R., Stenlid, J. and Johansson, M. (1996) Fungi in bark peeling wounds of Picea abies in central Sweden. European Journal of Forest Pathology 26, 285-296.
91. Watt, M.S., Ganley, R.J., Kriticos, D.J. and Manning, L.K. (2011a) Dothistroma needle blight and pitch canker: the current and future potential distribution of two important diseases of Pinus species. Canadian Journal of Forest Research 41, 412-424.
92. Watt, M.S., Palmer, D.J. and Bulman, L.S. (2011b) Predicting the severity of Dothistroma on Pinus radiata under current climate in New Zealand. Forest Ecology and Management 261, 1792-1798.
93. Wingfield, M.J., Slippers, B., Roux, J. and Wingfield, B.D. (2001) Worldwide movement of exotic forest fungi, especially in the tropics and the southern hemisphere. BioScience 51, 134-140.
94. Woods, A., Coates, K.D. and Hamann, A. (2005) Is an unprecedented Dothistroma needle blight epidemic related to climate change?. BioScience 55, 761-769.
95. Woodward, S., Stenlid, J., Karjalainen, R. and Hüttermann, A. (eds). (1998) Heterobasidion annosum: Biology, Ecology, Impact and Control. CAB International, Wallingford, UK.