-
1
-
-
66249083118
-
Emerging roles for lipids in shaping membrane-protein function
-
10.1038/nature08147 1:CAS:528:DC%2BD1MXmtFKmtrc%3D
-
Phillips R, Ursell T, Wiggins P, Sens P (2009) Emerging roles for lipids in shaping membrane-protein function. Nat Biotechnol 459(7245):379-385
-
(2009)
Nature
, vol.459
, Issue.7245
, pp. 379-385
-
-
Phillips, R.1
Ursell, T.2
Wiggins, P.3
Sens, P.4
-
2
-
-
0025147117
-
Activation of beef-heart cytochrome c oxidase by cardiolipin and analogues of cardiolipin
-
10.1016/0005-2728(90)90090-Q 1:CAS:528:DyaK3MXis1ai
-
Abramovitch D, Marsh D, Powell G (1990) Activation of beef-heart cytochrome c oxidase by cardiolipin and analogues of cardiolipin. Biochim Biophys Acta Bioenerg 1020(1):34-42
-
(1990)
Biochim Biophys Acta Bioenerg
, vol.1020
, Issue.1
, pp. 34-42
-
-
Abramovitch, D.1
Marsh, D.2
Powell, G.3
-
3
-
-
0037015161
-
Lipids in the structure, folding, and function of the KcsA K+ channel
-
Valiyaveetil F, Zhou Y, MacKinnon R (2002) Lipids in the structure, folding, and function of the KcsA K+ channel. Biochem Cell Biol 41(35):10771-10777
-
(2002)
Biochem Cell Biol
, vol.41
, Issue.35
, pp. 10771-10777
-
-
Valiyaveetil, F.1
Zhou, Y.2
Mackinnon, R.3
-
4
-
-
0036725152
-
Physical principles underlying the transduction of bilayer deformation forces during mechanosensitive channel gating
-
10.1038/nsb827 1:CAS:528:DC%2BD38Xms1ajtLw%3D
-
Perozo E, Kloda A, Cortes D, Martinac B (2002) Physical principles underlying the transduction of bilayer deformation forces during mechanosensitive channel gating. Nat Struct Mol Biol 9(9):696-703
-
(2002)
Nat Struct Mol Biol
, vol.9
, Issue.9
, pp. 696-703
-
-
Perozo, E.1
Kloda, A.2
Cortes, D.3
Martinac, B.4
-
5
-
-
7244244196
-
Lipids do influence protein function the hydrophobic matching hypothesis revisited
-
10.1016/j.bbamem.2004.06.009 1:CAS:528:DC%2BD2cXptFOktLc%3D
-
Jensen M, Mouritsen O (2004) Lipids do influence protein function the hydrophobic matching hypothesis revisited. Biochim Biophys Acta Biomembr 1666(1):205-226
-
(2004)
Biochim Biophys Acta Biomembr
, vol.1666
, Issue.1
, pp. 205-226
-
-
Jensen, M.1
Mouritsen, O.2
-
6
-
-
84867641705
-
Design of peptide-membrane interactions to modulate single-file water transport through modified gramicidin channels
-
10.1016/j.bpj.2012.08.059 1:CAS:528:DC%2BC38XhsFCltbjN
-
Portella G, Polupanow T, Zocher F, Boytsov D, Pohl P, Diederichsen U, de Groot B (2012) Design of peptide-membrane interactions to modulate single-file water transport through modified gramicidin channels. Biophys J 103(8):1698-1705
-
(2012)
Biophys J
, vol.103
, Issue.8
, pp. 1698-1705
-
-
Portella, G.1
Polupanow, T.2
Zocher, F.3
Boytsov, D.4
Pohl, P.5
Diederichsen, U.6
De Groot, B.7
-
7
-
-
45449105164
-
Protein modulation of lipids, and vice-versa, in membranes
-
10.1016/j.bbamem.2008.01.015 1:CAS:528:DC%2BD1cXnsFCrsL8%3D
-
Marsh D (2008) Protein modulation of lipids, and vice-versa, in membranes. Biochim Biophys Acta Biomembr 1778(7):1545-1575
-
(2008)
Biochim Biophys Acta Biomembr
, vol.1778
, Issue.7
, pp. 1545-1575
-
-
Marsh, D.1
-
8
-
-
84862991982
-
Line-tension controlled mechanism for influenza fusion
-
10.1371/journal.pone.0038302 1:CAS:528:DC%2BC38XpvVWrtb8%3D
-
Risselada H, Marelli G, Fuhrmans M, Smirnova Y, Grubmüller H, Marrink S, Müller M (2012) Line-tension controlled mechanism for influenza fusion. PloS One 7(6):e38,302
-
(2012)
PloS One
, vol.7
, Issue.6
, pp. 38
-
-
Risselada, H.1
Marelli, G.2
Fuhrmans, M.3
Smirnova, Y.4
Grubmüller, H.5
Marrink, S.6
Müller, M.7
-
9
-
-
0030949124
-
Functional rafts in cell membranes
-
1:CAS:528:DyaK2sXktFCitrk%3D
-
Simons K, Ikonen E (1997) Functional rafts in cell membranes. Nat Biotechnol 387(6633):569-572
-
(1997)
Nat Biotechnol
, vol.387
, Issue.6633
, pp. 569-572
-
-
Simons, K.1
Ikonen, E.2
-
10
-
-
56249119219
-
The molecular face of lipid rafts in model membranes
-
10.1073/pnas.0807527105 1:CAS:528:DC%2BD1cXhsVWns73K
-
Risselada H, Marrink S (2008) The molecular face of lipid rafts in model membranes. Proc Natl Acad Sci USA 105(45):17,367-17,372
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.45
, pp. 17
-
-
Risselada, H.1
Marrink, S.2
-
11
-
-
0034634708
-
Structure of lipid bilayers
-
10.1016/S0304-4157(00)00016-2 1:CAS:528:DC%2BD3cXovFKns7c%3D
-
Nagle J, Tristram-Nagle S (2000) Structure of lipid bilayers. Biochim Biophys Acta Rev Biomembr 1469(3):159-195
-
(2000)
Biochim Biophys Acta Rev Biomembr
, vol.1469
, Issue.3
, pp. 159-195
-
-
Nagle, J.1
Tristram-Nagle, S.2
-
12
-
-
65549152828
-
Perturbation of membranes by the amyloid β-peptide-A molecular dynamics study
-
10.1111/j.1742-4658.2009.07024.x 1:CAS:528:DC%2BD1MXmslaqsr8%3D
-
Lemkul J, Bevan D (2009) Perturbation of membranes by the amyloid β-peptide-a molecular dynamics study. Febs Journal 276(11):3060-3075
-
(2009)
Febs Journal
, vol.276
, Issue.11
, pp. 3060-3075
-
-
Lemkul, J.1
Bevan, D.2
-
13
-
-
84869868315
-
How the amyloid-β peptide and membranes affect each other: An extensive simulation study
-
10.1016/j.bbamem.2012.09.001 1:CAS:528:DC%2BC3sXhtVOrtw%3D%3D
-
Poojari C, Kukol A, Strodel B (2013) How the amyloid-β peptide and membranes affect each other: an extensive simulation study. Biochim Biophys Acta Biomembr 1828(2):327-339
-
(2013)
Biochim Biophys Acta Biomembr
, vol.1828
, Issue.2
, pp. 327-339
-
-
Poojari, C.1
Kukol, A.2
Strodel, B.3
-
14
-
-
78651092981
-
Functional dynamics in the voltage-dependent anion channel
-
10.1073/pnas.1012310108 1:CAS:528:DC%2BC3MXkslSrsQ%3D%3D
-
Villinger S, Briones R, Giller K, Zachariae U, Lange A, de Groot B, Griesinger C, Becker S, Zweckstetter M (2010) Functional dynamics in the voltage-dependent anion channel. Proc Natl Acad Sci USA 107(52):22,546-22,551
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.52
, pp. 22
-
-
Villinger, S.1
Briones, R.2
Giller, K.3
Zachariae, U.4
Lange, A.5
De Groot, B.6
Griesinger, C.7
Becker, S.8
Zweckstetter, M.9
-
15
-
-
84860389530
-
Molecular dynamics simulations of T-20 HIV fusion inhibitor interacting with model membranes
-
do Canto A, Carvalho A, Ramalho J, Loura L (2011) Molecular dynamics simulations of T-20 HIV fusion inhibitor interacting with model membranes. Biophys Chem 159(2):275-286
-
(2011)
Biophys Chem
, vol.159
, Issue.2
, pp. 275-286
-
-
Do Canto, A.1
Carvalho, A.2
Ramalho, J.3
Loura, L.4
-
16
-
-
84862291667
-
Molecular dynamics simulation of HIV fusion inhibitor T-1249: Insights on peptide-lipid interaction
-
doi: 10.1155/2012/151854
-
Martins do Canto A, Palace Carvalho A, Prates Ramalho J, Loura L (2012) Molecular dynamics simulation of HIV fusion inhibitor T-1249: insights on peptide-lipid interaction. Comput Math Methods Med 2012:1-14. doi: 10.1155/2012/151854
-
(2012)
Comput Math Methods Med
, pp. 1-14
-
-
Martins Do Canto, A.1
Palace Carvalho, A.2
Prates Ramalho, J.3
Loura, L.4
-
17
-
-
84870024819
-
Multi-scale simulation of the simian immunodeficiency virus fusion peptide
-
10.1021/jp3027385 1:CAS:528:DC%2BC38XhsFGqs7jO
-
Crowet JM, Parton DL, Hall BA, Steinhauer S, Brasseur R, Lins L, Sansom MSP (2012) Multi-scale simulation of the simian immunodeficiency virus fusion peptide. J Phys Chem B 116(46):13,713-13,721
-
(2012)
J Phys Chem B
, vol.116
, Issue.46
, pp. 13
-
-
Crowet, J.M.1
Parton, D.L.2
Hall, B.A.3
Steinhauer, S.4
Brasseur, R.5
Lins, L.6
Sansom, M.S.P.7
-
18
-
-
33847249878
-
Assessing the nature of lipid raft membranes
-
10.1371/journal.pcbi.0030034
-
Niemelä P, Ollila S, Hyvönen M, Karttunen M, Vattulainen I (2007) Assessing the nature of lipid raft membranes. PLoS Comput Biol 3(2):e34
-
(2007)
PLoS Comput Biol
, vol.3
, Issue.2
, pp. 34
-
-
Niemelä, P.1
Ollila, S.2
Hyvönen, M.3
Karttunen, M.4
Vattulainen, I.5
-
19
-
-
83255175485
-
Effects of cholesterol on pore formation in lipid bilayers induced by human islet amyloid polypeptide fragments: A coarse-grained molecular dynamics study
-
10.1103/PhysRevE.84.051922
-
Xu W, Wei G, Su H, Nordenskiöld L, Mu Y (2011) Effects of cholesterol on pore formation in lipid bilayers induced by human islet amyloid polypeptide fragments: a coarse-grained molecular dynamics study. Phys Rev E 84(5):051,922
-
(2011)
Phys Rev e
, vol.84
, Issue.5
, pp. 051
-
-
Xu, W.1
Wei, G.2
Su, H.3
Nordenskiöld, L.4
Mu, Y.5
-
20
-
-
65549083717
-
GridMAT-MD: A grid-based membrane analysis tool for use with molecular dynamics
-
Allen W, Lemkul J, Bevan D (2009) GridMAT-MD: a grid-based membrane analysis tool for use with molecular dynamics. J Comput Chem 30(12):1952-1958
-
(2009)
J Comput Chem
, vol.30
, Issue.12
, pp. 1952-1958
-
-
Allen, W.1
Lemkul, J.2
Bevan, D.3
-
21
-
-
0000254361
-
A Voronoi analysis of lipid area fluctuation in a bilayer
-
Shinoda W, Okazaki S (1998) A Voronoi analysis of lipid area fluctuation in a bilayer. J Chem Phys 109(4):1517-1521
-
(1998)
J Chem Phys
, vol.109
, Issue.4
, pp. 1517-1521
-
-
Shinoda, W.1
Okazaki, S.2
-
22
-
-
4143120994
-
Sphingomyelin-cholesterol domains in phospholipid membranes: Atomistic simulation
-
10.1529/biophysj.104.041939 1:CAS:528:DC%2BD2cXmvFeitbs%3D
-
Pandit S, Vasudevan S, Chiu S, Jay Mashl R, Jakobsson E, Scott H (2004) Sphingomyelin-cholesterol domains in phospholipid membranes: atomistic simulation. Biophys J 87(2):1092-1100
-
(2004)
Biophys J
, vol.87
, Issue.2
, pp. 1092-1100
-
-
Pandit, S.1
Vasudevan, S.2
Chiu, S.3
Jay Mashl, R.4
Jakobsson, E.5
Scott, H.6
-
23
-
-
83855161663
-
Analysis of lipid surface area in protein-membrane systems combining Voronoi tessellation and Monte Carlo integration methods
-
Mori T, Ogushi F, Sugita Y (2012) Analysis of lipid surface area in protein-membrane systems combining Voronoi tessellation and Monte Carlo integration methods. J Comput Chem 33(3):286-293
-
(2012)
J Comput Chem
, vol.33
, Issue.3
, pp. 286-293
-
-
Mori, T.1
Ogushi, F.2
Sugita, Y.3
-
24
-
-
34548146523
-
G protein-coupled receptors self-assemble in dynamics simulations of model bilayers
-
10.1021/ja0706246 1:CAS:528:DC%2BD2sXotVSntb0%3D
-
Periole X, Huber T, Marrink S, Sakmar T (2007) G protein-coupled receptors self-assemble in dynamics simulations of model bilayers. J Am Chem Soc 129(33):10126-10132
-
(2007)
J Am Chem Soc
, vol.129
, Issue.33
, pp. 10126-10132
-
-
Periole, X.1
Huber, T.2
Marrink, S.3
Sakmar, T.4
-
25
-
-
84876413305
-
Free energy of WALP23 dimer association in DMPC, DPPC, and DOPC bilayers
-
Castillo N, Monticelli L, Barnoud J, Tieleman DP (2013) Free energy of WALP23 dimer association in DMPC, DPPC, and DOPC bilayers. Chem Phys Lipids 169:95-105
-
(2013)
Chem Phys Lipids
, vol.169
, pp. 95-105
-
-
Castillo, N.1
Monticelli, L.2
Barnoud, J.3
Tieleman, D.P.4
-
26
-
-
46249092554
-
Gromacs 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation
-
10.1021/ct700301q 1:CAS:528:DC%2BD1cXhsVSqurc%3D
-
Hess B, Kutzner C, VanDer Spoel D, Lindahl E (2008) Gromacs 4: algorithms for highly efficient, load-balanced, and scalable molecular simulation. J Chem Theory Comput 4(3):435-447
-
(2008)
J Chem Theory Comput
, vol.4
, Issue.3
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
Vander Spoel, D.3
Lindahl, E.4
-
27
-
-
0012558164
-
On the relationship between CC and CD order parameters and its use for studying the conformation of lipid acyl chains in biomembranes
-
Douliez J, Ferrarini A, Dufourc E (1998) On the relationship between CC and CD order parameters and its use for studying the conformation of lipid acyl chains in biomembranes. J Chem Phys 109:2513
-
(1998)
J Chem Phys
, vol.109
, pp. 2513
-
-
Douliez, J.1
Ferrarini, A.2
Dufourc, E.3
-
28
-
-
84951854486
-
Molecular dynamics of a bilayer membrane
-
Van der Ploeg P, Berendsen H (1983) Molecular dynamics of a bilayer membrane. Mol Phys 49(1):233-248
-
(1983)
Mol Phys
, vol.49
, Issue.1
, pp. 233-248
-
-
Van Der Ploeg, P.1
Berendsen, H.2
-
30
-
-
0001563901
-
Molecular dynamics simulation of a smectic liquid crystal with atomic detail
-
10.1063/1.454893 1:CAS:528:DyaL1MXhs1Cmug%3D%3D
-
Egberts E, Berendsen H (1988) Molecular dynamics simulation of a smectic liquid crystal with atomic detail. J Chem Phys 89(6):3718-3732
-
(1988)
J Chem Phys
, vol.89
, Issue.6
, pp. 3718-3732
-
-
Egberts, E.1
Berendsen, H.2
-
31
-
-
0017808625
-
Molecular order in cis and trans unsaturated phospholipid bilayers
-
10.1021/bi00609a021 1:CAS:528:DyaE1cXlsVahs7g%3D
-
Seelig J, Waespe-Sarcevic N (1978) Molecular order in cis and trans unsaturated phospholipid bilayers. Biochem Cell Biol 17(16):3310-3315
-
(1978)
Biochemistry
, vol.17
, Issue.16
, pp. 3310-3315
-
-
Seelig, J.1
Waespe-Sarcevic, N.2
-
34
-
-
79959770281
-
Determination of electron density profiles and area from simulations of undulating membranes
-
10.1016/j.bpj.2011.03.009 1:CAS:528:DC%2BC3MXlsFahsL4%3D
-
Braun A, Brandt E, Edholm O, Nagle J, Sachs J (2011) Determination of electron density profiles and area from simulations of undulating membranes. Biophys J 100(9):2112-2120
-
(2011)
Biophys J
, vol.100
, Issue.9
, pp. 2112-2120
-
-
Braun, A.1
Brandt, E.2
Edholm, O.3
Nagle, J.4
Sachs, J.5
-
35
-
-
0348209599
-
A fast Fourier transform compiler
-
ACM
-
Frigo M (1999) A fast Fourier transform compiler. In: Acm sigplan notices, vol. 34, pp 169-180. ACM
-
(1999)
Acm Sigplan Notices
, vol.34
, pp. 169-180
-
-
Frigo, M.1
-
36
-
-
0029912748
-
Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids
-
Jorgensen W, Maxwell D, Tirado-Rives J (1996) Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids. J Am Chem Soc 118(45):11225-11236
-
(1996)
J Am Chem Soc
, vol.118
, Issue.45
, pp. 11225-11236
-
-
Jorgensen, W.1
Maxwell, D.2
Tirado-Rives, J.3
-
37
-
-
0030999097
-
Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature
-
10.1016/S0006-3495(97)78845-3 1:CAS:528:DyaK2sXivVOjsL4%3D
-
Berger O, Edholm O, Jähnig F (1997) Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature. Biophys J 72(5):2002-2013
-
(1997)
Biophys J
, vol.72
, Issue.5
, pp. 2002-2013
-
-
Berger, O.1
Edholm, O.2
Jähnig, F.3
-
38
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
10.1063/1.445869 1:CAS:528:DyaL3sXksF2htL4%3D
-
Jorgensen W, Chandrasekhar J, Madura J, Impey R, Klein M (1983) Comparison of simple potential functions for simulating liquid water. J Chem Phys 79:926-935
-
(1983)
J Chem Phys
, vol.79
, pp. 926-935
-
-
Jorgensen, W.1
Chandrasekhar, J.2
Madura, J.3
Impey, R.4
Klein, M.5
-
39
-
-
33846823909
-
Particle mesh Ewald: An N·log (N) method for Ewald sums in large systems
-
10,089
-
Darden T, York D, Pedersen L (1993) Particle mesh Ewald: an N·log (N) method for Ewald sums in large systems. J Chem Phys 98:10,089
-
(1993)
J Chem Phys
, vol.98
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
40
-
-
33645961739
-
A smooth particle mesh Ewald method
-
Essmann U, Perera L, Berkowitz M, Darden T, Lee H, Pedersen L (1995) A smooth particle mesh Ewald method. J Chem Phys 103(19):8577-8593
-
(1995)
J Chem Phys
, vol.103
, Issue.19
, pp. 8577-8593
-
-
Essmann, U.1
Perera, L.2
Berkowitz, M.3
Darden, T.4
Lee, H.5
Pedersen, L.6
-
41
-
-
33846086933
-
Canonical sampling through velocity rescaling
-
10.1063/1.2408420
-
Bussi G, Donadio D, Parrinello M (2007) Canonical sampling through velocity rescaling. J Chem Phys 126:014,101
-
(2007)
J Chem Phys
, vol.126
, pp. 014
-
-
Bussi, G.1
Donadio, D.2
Parrinello, M.3
-
42
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
10.1063/1.448118 1:CAS:528:DyaL2cXmtlGksbY%3D
-
Berendsen HJ, Postma JPM, van Gunsteren WF, DiNola A, Haak J (1984) Molecular dynamics with coupling to an external bath. J Chem Phys 81:3684
-
(1984)
J Chem Phys
, vol.81
, pp. 3684
-
-
Berendsen, H.J.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
Dinola, A.4
Haak, J.5
-
43
-
-
33646786476
-
The N-terminal 12 residue long peptide of HIV gp41 is the minimal peptide sufficient to induce significant T-cell-like membrane destabilization in vitro
-
Charloteaux B, Lorin A, Crowet J, Stroobant V, Lins L, Thomas A, Brasseur R (2006) The N-terminal 12 residue long peptide of HIV gp41 is the minimal peptide sufficient to induce significant T-cell-like membrane destabilization in vitro. J Mol Biol 359:597-609
-
(2006)
J Mol Biol
, vol.359
, pp. 597-609
-
-
Charloteaux, B.1
Lorin, A.2
Crowet, J.3
Stroobant, V.4
Lins, L.5
Thomas, A.6
Brasseur, R.7
-
44
-
-
0002775934
-
Interaction models for water in relation to protein hydration
-
Berendsen HJC, Postma JPM, Van Gunsteren WF, Hermans J (1981) Interaction models for water in relation to protein hydration. Intermol Forces 11(1):331-342
-
(1981)
Intermol Forces
, vol.11
, Issue.1
, pp. 331-342
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
Van Gunsteren, W.F.3
Hermans, J.4
-
45
-
-
0003544049
-
-
VdF: Hochschulverlag AG an der ETH Zürich, Zürich, Switzerland (1996). ISBN 3 7281 2422 2
-
van Gunsteren W, Billeter S, Eising A, Hunenberger P, Kruger P, Mark A, Scott W, Tironi I (1996) Biomolecular simulation: the GROMOS96 manual and user guide. VdF: Hochschulverlag AG an der ETH Zürich, Zürich, Switzerland (1996). ISBN 3 7281 2422 2
-
(1996)
Biomolecular Simulation: The GROMOS96 Manual and User Guide
-
-
Van Gunsteren, W.1
Billeter, S.2
Eising, A.3
Hunenberger, P.4
Kruger, P.5
Mark, A.6
Scott, W.7
Tironi, I.8
-
47
-
-
0028341536
-
Permeation of hydrophilic solutes through mitochondrial outer membranes: Review on mitochondrial porins
-
10.1016/0304-4157(94)90004-3 1:CAS:528:DyaK2cXlt1OqsLw%3D
-
Benz R (1994) Permeation of hydrophilic solutes through mitochondrial outer membranes: review on mitochondrial porins. Biochim Biophys Acta Biomembr 1197(2):167-196
-
(1994)
Biochim Biophys Acta Biomembr
, vol.1197
, Issue.2
, pp. 167-196
-
-
Benz, R.1
-
48
-
-
21744441655
-
The voltage-dependent anion channel-1 modulates apoptotic cell death
-
10.1038/sj.cdd.4401599 1:CAS:528:DC%2BD2MXltFKjsLs%3D
-
Zaid H, Abu-Hamad S, Israelson A, Nathan I, Shoshan-Barmatz V (2005) The voltage-dependent anion channel-1 modulates apoptotic cell death. Cell Death Differ 12(7):751-760
-
(2005)
Cell Death Differ
, vol.12
, Issue.7
, pp. 751-760
-
-
Zaid, H.1
Abu-Hamad, S.2
Israelson, A.3
Nathan, I.4
Shoshan-Barmatz, V.5
-
49
-
-
84858636088
-
Large influence of cholesterol on solute partitioning into lipid membranes
-
10.1021/ja211929h 1:CAS:528:DC%2BC38XjtVCqtLs%3D
-
Wennberg C, van der Spoel D, Hub J (2012) Large influence of cholesterol on solute partitioning into lipid membranes. J Am Chem Soc 134(11):5351-5361
-
(2012)
J Am Chem Soc
, vol.134
, Issue.11
, pp. 5351-5361
-
-
Wennberg, C.1
Van Der Spoel, D.2
Hub, J.3
-
50
-
-
0039864629
-
Measurements of membrane thickness by small-angle scattering of suspensions: Results for reconstituted rhodopseudomonas sphaeroides reaction-center protein and for lipids
-
10.1021/bi00307a026 1:CAS:528:DyaL2cXitVKlt74%3D
-
Sadler DM, Rivas E, Gulik-Krzywicki T, Reiss-Husson F (1984) Measurements of membrane thickness by small-angle scattering of suspensions: results for reconstituted rhodopseudomonas sphaeroides reaction-center protein and for lipids. Biochem Cell Biol 23(12):2704-2712
-
(1984)
Biochemistry
, vol.23
, Issue.12
, pp. 2704-2712
-
-
Sadler, D.M.1
Rivas, E.2
Gulik-Krzywicki, T.3
Reiss-Husson, F.4
-
51
-
-
24044479637
-
Structure and orientation study of fusion peptide FP23 of gp41 from HIV-1 alone or inserted into various lipid membrane models (mono-, bi- and multibi-layers) by FT-IR spectroscopies and Brewster angle microscopy
-
Castano S, Desbat B (2005) Structure and orientation study of fusion peptide FP23 of gp41 from HIV-1 alone or inserted into various lipid membrane models (mono-, bi- and multibi-layers) by FT-IR spectroscopies and Brewster angle microscopy. Biochim Biophys Acta Biomembr 1715(2):81-95
-
(2005)
Biochim Biophys Acta Biomembr
, vol.1715
, Issue.2
, pp. 81-95
-
-
Castano, S.1
Desbat, B.2
-
52
-
-
56649099192
-
The crystal structure of mouse VDAC1 at 2.3 Å resolution reveals mechanistic insights into metabolite gating
-
doi: 10.1073/pnas.0809634105
-
Ujwal R, Cascio D, Colletier JP, Faham S, Zhang J, Toro L, Ping P, Abramson J (2008) The crystal structure of mouse VDAC1 at 2.3 Å resolution reveals mechanistic insights into metabolite gating. Proc Natl Acad Sci USA 105(46):17742-17747. doi: 10.1073/pnas.0809634105
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.46
, pp. 17742-17747
-
-
Ujwal, R.1
Cascio, D.2
Colletier, J.P.3
Faham, S.4
Zhang, J.5
Toro, L.6
Ping, P.7
Abramson, J.8
-
53
-
-
0015441961
-
Effect of cholesterol and water on the rigidity and order of phosphatidylcholine bilayers
-
10.1016/0005-2736(72)90049-1 1:CAS:528:DyaE3sXjvFOhsA%3D%3D
-
Boggs J, Hsia J (1972) Effect of cholesterol and water on the rigidity and order of phosphatidylcholine bilayers. Biochim Biophys Acta Biomembr 290:32-42
-
(1972)
Biochim Biophys Acta Biomembr
, vol.290
, pp. 32-42
-
-
Boggs, J.1
Hsia, J.2
-
54
-
-
0017816466
-
Spectroscopic studies of specifically deuterium labeled membrane systems. Nuclear magnetic resonance investigation of the effects of cholesterol in model systems
-
10.1021/bi00607a006 1:CAS:528:DyaE1cXltVagsLg%3D
-
Oldfield E, Meadows M, Rice D, Jacobs R (1978) Spectroscopic studies of specifically deuterium labeled membrane systems. Nuclear magnetic resonance investigation of the effects of cholesterol in model systems. Biochemistry 17(14):2727-2740
-
(1978)
Biochemistry
, vol.17
, Issue.14
, pp. 2727-2740
-
-
Oldfield, E.1
Meadows, M.2
Rice, D.3
Jacobs, R.4
-
55
-
-
0025633287
-
Modulation of phospholipid acyl chain order by cholesterol. A solid-state deuterium nuclear magnetic resonance study
-
10.1021/bi00499a015 1:CAS:528:DyaK3cXmt1Kks7o%3D
-
Sankaram MB, Thompson TE (1990) Modulation of phospholipid acyl chain order by cholesterol. A solid-state deuterium nuclear magnetic resonance study. Biochemistry 29(47):10676-10684
-
(1990)
Biochemistry
, vol.29
, Issue.47
, pp. 10676-10684
-
-
Sankaram, M.B.1
Thompson, T.E.2
-
57
-
-
0028835996
-
Behavior of cholesterol and its effect on head group and chain conformations in lipid bilayers: A molecular dynamics study
-
10.1016/S0006-3495(95)80171-2 1:CAS:528:DyaK2MXivF2hsLg%3D
-
Robinson AJ, Richards WG, Thomas PJ, Hann MM (1995) Behavior of cholesterol and its effect on head group and chain conformations in lipid bilayers: a molecular dynamics study. Biophys J 68(1):164-170
-
(1995)
Biophys J
, vol.68
, Issue.1
, pp. 164-170
-
-
Robinson, A.J.1
Richards, W.G.2
Thomas, P.J.3
Hann, M.M.4
-
58
-
-
0032863720
-
Structure of dipalmitoylphosphatidylcholine/cholesterol bilayer at low and high cholesterol concentrations: Molecular dynamics simulation
-
10.1016/S0006-3495(99)77049-9 1:CAS:528:DyaK1MXmtl2mtrw%3D
-
Smondyrev AM, Berkowitz ML (1999) Structure of dipalmitoylphosphatidylcholine/cholesterol bilayer at low and high cholesterol concentrations: molecular dynamics simulation. Biophys J 77(4):2075-2089
-
(1999)
Biophys J
, vol.77
, Issue.4
, pp. 2075-2089
-
-
Smondyrev, A.M.1
Berkowitz, M.L.2
-
59
-
-
0036787706
-
Cholesterol-induced modifications in lipid bilayers: A simulation study
-
10.1016/S0006-3495(02)73949-0 1:CAS:528:DC%2BD38XnslSrs7k%3D
-
Chiu S, Jakobsson E, Mashl RJ, Scott HL (2002) Cholesterol-induced modifications in lipid bilayers: a simulation study. Biophys J 83(4):1842-1853
-
(2002)
Biophys J
, vol.83
, Issue.4
, pp. 1842-1853
-
-
Chiu, S.1
Jakobsson, E.2
Mashl, R.J.3
Scott, H.L.4
-
60
-
-
0037381939
-
Molecular dynamics simulations of phospholipid bilayers with cholesterol
-
10.1016/S0006-3495(03)75025-5
-
Hofsäß C, Lindahl E, Edholm O (2003) Molecular dynamics simulations of phospholipid bilayers with cholesterol. Biophys J 84(4):2192
-
(2003)
Biophys J
, vol.84
, Issue.4
, pp. 2192
-
-
Hofsäß, C.1
Lindahl, E.2
Edholm, O.3
-
61
-
-
30544440028
-
Modulating membrane properties: The effect of trehalose and cholesterol on a phospholipid bilayer
-
10.1021/jp054843u 1:CAS:528:DC%2BD2MXht1Gms7rL
-
Doxastakis M, Sum AK, de Pablo JJ (2005) Modulating membrane properties: the effect of trehalose and cholesterol on a phospholipid bilayer. J Phys Chem B 109(50):24173-24181
-
(2005)
J Phys Chem B
, vol.109
, Issue.50
, pp. 24173-24181
-
-
Doxastakis, M.1
Sum, A.K.2
De Pablo, J.J.3
-
62
-
-
1242293699
-
Non-polar interactions between cholesterol and phospholipids: A molecular dynamics simulation study
-
10.1016/j.bpc.2003.09.002
-
Róg T, Pasenkiewicz-Gierula M (2004) Non-polar interactions between cholesterol and phospholipids: a molecular dynamics simulation study. Biophys Chem 107(2):151-164
-
(2004)
Biophys Chem
, vol.107
, Issue.2
, pp. 151-164
-
-
Róg, T.1
Pasenkiewicz-Gierula, M.2
-
63
-
-
0022568619
-
Spin-label studies on phosphatidylcholine-cholesterol membranes: Effects of alkyl chain length and unsaturation in the fluid phase
-
10.1016/0005-2736(86)90124-0 1:CAS:528:DyaL28XhtVCks7k%3D
-
Kusumi A, Subczynski WK, Pasenkiewicz-Gierula M, Hyde JS, Merkle H (1986) Spin-label studies on phosphatidylcholine-cholesterol membranes: effects of alkyl chain length and unsaturation in the fluid phase. Biochim Biophys Acta Biomembr 854(2):307-317
-
(1986)
Biochim Biophys Acta Biomembr
, vol.854
, Issue.2
, pp. 307-317
-
-
Kusumi, A.1
Subczynski, W.K.2
Pasenkiewicz-Gierula, M.3
Hyde, J.S.4
Merkle, H.5
-
64
-
-
24144488293
-
Areas of molecules in membranes consisting of mixtures
-
10.1529/biophysj.105.064329 1:CAS:528:DC%2BD2MXpvF2kurg%3D
-
Edholm O, Nagle JF (2005) Areas of molecules in membranes consisting of mixtures. Biophys J 89(3):1827-1832
-
(2005)
Biophys J
, vol.89
, Issue.3
, pp. 1827-1832
-
-
Edholm, O.1
Nagle, J.F.2
-
65
-
-
58149204263
-
Ordering effects of cholesterol and its analogues
-
10.1016/j.bbamem.2008.08.022
-
Róg T, Pasenkiewicz-Gierula M, Vattulainen I, Karttunen M (2009) Ordering effects of cholesterol and its analogues. Biochim Biophys Acta Biomembr 1788(1):97-121
-
(2009)
Biochim Biophys Acta Biomembr
, vol.1788
, Issue.1
, pp. 97-121
-
-
Róg, T.1
Pasenkiewicz-Gierula, M.2
Vattulainen, I.3
Karttunen, M.4
-
66
-
-
79958185452
-
MDAnalysis: A toolkit for the analysis of molecular dynamics simulations
-
Michaud-Agrawal N, Denning EJ, Woolf TB, Beckstein O (2011) MDAnalysis: a toolkit for the analysis of molecular dynamics simulations. J Comput Chem 32(3):2319-2327
-
(2011)
J Comput Chem
, vol.32
, Issue.3
, pp. 2319-2327
-
-
Michaud-Agrawal, N.1
Denning, E.J.2
Woolf, T.B.3
Beckstein, O.4
|