The achievement of shuttle vector techniques in mammalian cell mutation research

Genes and Environment

Volumn 35, Issue 4, 2013, Pages 93-98

  Yagi, Takashi ^a,b  

^a Osaka Prefecture University   (Japan)

^b Dongguk University   (South Korea)

Author keywords

Mutation; PMY189; PNY200; PZ189; Shuttle vector plasmid; SupF

Indexed keywords

8 AZAGUANINE; HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE; MUTAGENIC AGENT; TIOGUANINE;

ACHIEVEMENT; CULTURAL ANTHROPOLOGY; DNA MODIFICATION; DNA SEQUENCE; GENE MUTATION; HUMAN; MAMMAL CELL; MOLECULAR BIOLOGY; MUTANT; NONHUMAN; PLASMID; POLYMERASE CHAIN REACTION; REVIEW; SHUTTLE VECTOR;

EID: 84890405539     PISSN: 18807046     EISSN: 18807062     Source Type: Journal    
DOI: 10.3123/jemsge.2013.001     Document Type: Review

References (62)

1. Chu EH, Malling HV. Mammalian cell genetics. II. Chemical induction of specic locus mutations in Chinese hamster cells in vitro. Proc Natl Acad Sci USA. 1968; 61: 1306-12.
2. Sato K, Slesinski RS, Littleeld JW. Chemical mutagenesis at the phosphoribosyltransferase locus in cultured human lymphoblasts. Proc Natl Acad Sci USA. 1972; 69: 1244-8.
3. Sanger F, Nicklen S, Coulson AR. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA. 1977; 74: 5463-7.
4. Sanger F, Coulson AR.FEBS Lett. The use of thin acrylamide gels for DNA sequencing. 1978; 87: 107-10. (Pubitemid 8285613)
5. Seidman MM, Dixon K, Razzaque A, Zagursky RJ, Berman ML. A shuttle vector plasmid for studying carcinogen-induced point mutations in mammalian cells. Gene. 1985; 38: 233-7. (Pubitemid 16169922)
6. Saiki RK, Scharf S, Faloona F, Mullis KB, Horn GT, Erlich HA, Arnheim N. Enzymatic amplication of betaglobin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. Science. 1985; 230: 1350-4. (Pubitemid 16105164)
7. Mullis KB, Faloona FA. Specic synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods Enzymol. 1987; 155: 335-50.
8. Vrieling H, Simons JW, van Zeeland AA. Nucleotide sequence determination of point mutations at the mouse HPRT locus using in vitro amplication of HPRT mRNA sequences. Mutat Res. 1988; 198: 107-13. (Pubitemid 18064350)
9. Yu YJ, Xu Z, Gibbs RA, Hsie AW. Polymerase chain reaction-based comprehensive procedure for the analysis of the mutation spectrum at the hypoxanthine-guanine phosphoribosyltransferase locus in Chinese hamster cells. Environ Mol Mutagen. 1992; 19: 267-73.
10. Smith LM, Sanders JZ, Kaiser RJ, Hughes P, Dodd C, Connell CR, Heiner C, Kent SB, Hood LE. Fluorescence detection in automated DNA sequence analysis. Nature. 1986; 321: 674-9. (Pubitemid 16044126)
11. Ansorge W, Sproat B, Stegemann J, Schwager C, Zenke M. Automated DNA sequencing: ultrasensitive detection of uorescent bands during electrophoresis. Nucleic Acids Res. 1987; 15: 4593-602.
12. Gossen JA, de Leeuw WJ, Tan CH, ZwarthoS EC, Berends F, Lohman PH, Knook DL, Vijg J. E cient rescue of integrated shuttle vectors from transgenic mice: a model for studying mutations in vivo. Proc Natl Acad Sci USA. 1989; 86: 7971-5. (Pubitemid 19265301)
13. Kohler SW, Provost GS, Fieck A, Kretz PL, Bullock WO, Sorge JA, Putman DL, Short JM. Spectra of spontaneous and mutagen-induced mutations in the lacI gene in transgenic mice. Proc Natl Acad Sci USA. 1991; 88: 7958-62. (Pubitemid 21915274)
14. Nohmi T, Katoh M, Suzuki H, Matsui M, Yamada M, Watanabe M, Suzuki M, Horiya N, Ueda O, Shibuya T, Ikeda H, Sofuni T. A new transgenic mouse mutagenesis test system using Spi- and 6-thioguanine selections. Environ Mol Mutagen. 1996; 28: 465-70. (Pubitemid 126450192)
15. OECD. OECD Guidelines for the Testing of Chemicals, Section 4: Health ESects Test No. 488: Transgenic Rodent Somatic and Germ Cell Gene Mutation Assays. UK: OECD Publishing; 2011.
16. Halloran N, Du Z, Wilson RK. Sequencing reactions for the applied biosystems 373A Automated DNA Sequencer. Methods Mol Biol. 1993; 23: 297-315.
17. Matsuda T, Yagi T, Kawanishi M, Matsui S, Takebe H. Molecular analysis of mutations induced by 2-chloroacetaldehyde, the ultimate carcinogenic form of vinyl chloride, in human cells using shuttle vectors. Carcinogenesis. 1995; 16: 2389-94.
18. Yagi T, Sato M, Nishigori C, Takebe H. Similarity in the molecular prole of mutations induced by UV light in shuttle vector plasmids propagated in mouse and human cells. Mutagenesis. 1994; 9: 73-7. (Pubitemid 24031026)
19. Nakayama A, Kawanishi M, Takebe H, Morisawa S, Yagi T. Molecular analysis of mutations induced by a benzene metabolite, p-benzoquinone, in mouse cells using a novel shuttle vector plasmid. Mutat Res. 1999; 444: 123-31. (Pubitemid 29341531)
20. Parris CN, Seidman MM. A signature element distinguishes sibling and independent mutations in a shuttle vector plasmid. Gene. 1992; 117: 1-5.
21. Akasaka S, Takimoto K, Yamamoto K. G:CT:A and G:CC:G transversions are the predominant spontaneous mutations in the Escherichia coli supF gene: an improved lacZ(am) E. coli host designed for assaying pZ189 supF mutational specicity. Mol Gen Genet. 1992; 235: 173-8. (Pubitemid 23003955)
22. Bredberg A, Kraemer KH, Seidman MM. Restricted ultraviolet mutational spectrum in a shuttle vector propagated in xeroderma pigmentosum cells. Proc Natl Acad Sci USA. 1986; 83: 8273-7. (Pubitemid 17182483)
23. Seetharam S, Proticá -Sabljicá M, Seidman MM, Kraemer KH. Abnormal ultraviolet mutagenic spectrum in plasmid DNA replicated in cultured broblasts from a patient with the skin cancer-prone disease, xeroderma pigmentosum. J Clin Invest. 1987; 80: 1613-7. (Pubitemid 18007132)
24. Seetharam S, Kraemer KH, Waters HL, Seidman MM. Mutational hotspot variability in an ultraviolet-treated shuttle vector plasmid propagated in xeroderma pigmentosum and normal human lymphoblasts and broblasts. J Mol Biol. 1990; 212: 433-6.
25. Seetharam S, Kraemer KH, Waters HL, Seidman MM. Ultraviolet mutational spectrum in a shuttle vector propagated in xeroderma pigmentosum lymphoblastoid cells and broblasts. Mutat Res. 1991; 254: 97-105.
26. Yagi T, Tatsumi-Miyajima J, Sato M, Kraemer KH, Takebe H. Analysis of point mutations in an ultravioletirradiated shuttle vector plasmid propagated in cells from Japanese xeroderma pigmentosum patients in complementation groups A and F. Cancer Res. 1991; 51: 3177-82.
27. Yagi T, Sato M, Tatsumi-Miyajima J, Takebe H. UV-induced base substitution mutations in a shuttle vector plasmid propagated in group C xeroderma pigmentosum cells. Mutat Res. 1992; 273: 213-20.
28. Pfeifer GP, You YH, Besaratinia A. Mutations induced by ultraviolet light. Mutat Res. 2005; 571: 19-31. (Pubitemid 40313429)
29. Ikehata H, Ono T. The mechanisms of UV mutagenesis. J Radiat Res. 2011; 52: 115-25.
30. Otoshi E, Yagi T, Mori T, Matsunaga T, Nikaido O, Kim ST, Hitomi K, Ikenaga M, Todo T. Respective roles of cyclobutane pyrimidine dimers, (6-4)photoproducts, and minor photoproducts in ultraviolet mutagenesis of repairde cient xeroderma pigmentosum A cells. Cancer Res. 2000; 60: 1729-35. (Pubitemid 30183448)
31. Soussi T. p53 alterations in human cancer: more questions than answers. Oncogene. 2007; 26: 2145-56. (Pubitemid 46536642)
32. Pfeifer GP, Besaratinia A. Mutational spectra of human cancer. Hum Genet. 2009; 125: 493-506.
33. Sato M, Nishigori C, Zghal M, Yagi T, Takebe H. Ultraviolet-specic mutations in p53 gene in skin tumors in xeroderma pigmentosum patients. Cancer Res. 1993; 53: 2944-6. (Pubitemid 23210291)
34. Matsumura Y, Sato M, Nishigori C, Zghal M, Yagi T, Imamura S, Takebe H. High prevalence of mutations in the p53 gene in poorly diSerentiated squamous cell carcinomas in xeroderma pigmentosum patients. J Invest Dermatol. 1995; 105: 399-401.
35. Giglia-Mari G, Sarasin A. TP53 mutations in human skin cancers. Hum Mutat. 2003; 21: 217-28. (Pubitemid 36292964)
36. Matsumura Y, Nishigori C, Yagi T, Imamura S, Takebe H. Characterization of p53 gene mutations in basal-cell carcinomas: Comparison between sun-exposed and lessexposed skin areas. Int J Cancer. 1996; 65: 778-80. (Pubitemid 26126261)
37. Moriwaki S, Yagi T, Nishigori C, Imamura S, Takebe H Analysis of N-methyl-N-nitrosourea-induced mutations in a shuttle vector plasmid propagated in mouse O6- methylguanine-DNA methyltransferase-decient cells in comparison with procient cells. Cancer Res. 1991; 51: 6219-23.
38. SaShill R, Margison GP, O'Connor PJ. Mechanisms of carcinogenesis induced by alkylating agents. Biochim Biophys Acta. 1985; 823: 111-45. (Pubitemid 16169121)
39. Haracska L, Prakash L, Prakash S. Role of human DNA polymerase kappa as an extender in translesion synthesis. Proc Natl Acad Sci USA. 2002; 99: 16000-5. (Pubitemid 35462738)
40. Maher VM, Yang JL, McCormick JJ. Ability of adducts formed in a shuttle vector by reactive metabolites of 1- nitropyrene and benzo[a]pyrene to induce mutations when the plasmid replicates in human cells. Acta Biol Hung. 1990; 41: 173-86.
41. Mah MC, Maher VM, Thomas H, Reid TM, King CM, McCormick JJ. Mutations induced by aminouorene- DNA adducts during replication in human cells. Carcinogenesis. 1989; 10: 2321-8. (Pubitemid 20009116)
42. Kawanishi M, Enya T, Suzuki H, Takebe H, Matsui S, Yagi T. Mutagenic specicity of a derivative of 3- nitrobenzanthrone in the supF shuttle vector plasmids. Chem Res Toxicol. 1998; 11: 1468-73. (Pubitemid 29013620)
43. Nishida H, Kawanishi M, Takamura-Enya T, Yagi T. Mutagenic specicity of N-acetoxy-3-aminobenzanthrone, a major metabolically activated form of 3- nitrobenzanthrone, in shuttle vector plasmids propagated in human cells. Mutat Res. 2008; 654: 82-7.
44. Chiapperino D, Kroth H, Kramarczuk IH, Sayer JM, Masutani C, Hanaoka F, Jerina DM, Cheh AM. Preferential misincorporation of purine nucleotides by human DNA polymerase eta opposite benzo[a]pyrene 7,8-diol 9,10-epoxide deoxyguanosine adducts. J Biol Chem. 2002; 277: 11765-71. (Pubitemid 34952731)
45. Kirouac KN, Basu AK, Ling H. Replication of a carcinogenic nitropyrene DNA lesion by human Y-family DNA polymerase. Nucleic Acids Res. 2013; 41: 2060-71.
46. Taylor JS. New structural and mechanistic insight into the A-rule and the instructional and non-instructional behavior of DNA photoproducts and other lesions. Mutat Res. 2002; 510: 55-70.
47. Minko IG, Kozekov ID, Harris TM, Rizzo CJ, Lloyd RS, Stone MP. Chemistry and biology of DNA containing 1,N(2)-deoxyguanosine adducts of the alpha,beta-unsaturated aldehydes acrolein, crotonaldehyde, and 4-hydroxynonenal. Chem Res Toxicol. 2009; 22: 759-78.
48. Voulgaridou GP, Anestopoulos I, Franco R, Panayiotidis MI, Pappa A. DNA damage induced by endogenous aldehydes: current state of knowledge. Mutat Res. 2011; 711: 13-27.
49. Matsuda T, Yagi T, Kawanishi M, Matsui S, Takebe H. Molecular analysis of mutations induced by 2-chloroacetaldehyde, the ultimate carcinogenic form of vinyl chloride, in human cells using shuttle vectors. Carcinogenesis. 1995; 16: 2389-94.
50. Kawanishi M, Matsuda T, Sasaki G, Yagi T, Matsui S, Takebe H. A spectrum of mutations induced by crotonaldehyde in shuttle vector plasmids propagated in human cells. Carcinogenesis. 1998; 19: 69-72. (Pubitemid 28378516)
51. Matsuda T, Kawanishi M, Yagi T, Matsui S, Takebe H. Specic tandem GG to TT base substitutions induced by acetaldehyde are due to intra-strand crosslinks between adjacent guanine bases. Nucleic Acids Res. 1998; 26: 1769-74. (Pubitemid 28291815)
52. Kawanishi M, Matsuda T, Nakayama A, Takebe H, Matsui S, Yagi T. Molecular analysis of mutations induced by acrolein in human broblast cells using supF shuttle vector plasmids. Mutat Res. 1998; 417: 65-73. (Pubitemid 28414378)
53. Murata-Kamiya N, Kamiya H, Kaji H, Kasai H. Glyoxal, a major product of DNA oxidation, induces mutations at G:C sites on a shuttle vector plasmid replicated in mammalian cells. Nucleic Acids Res. 1997; 25: 1897-902. (Pubitemid 27303383)
54. Murata-Kamiya N, Kamiya H, Kaji H, Kasai H. Methylglyoxal induces G:C to C:G and G:C to T:A transversions in the supF gene on a shuttle vector plasmid replicated in mammalian cells. Mutat Res. 2000; 468: 173-82. (Pubitemid 30406855)
55. Snyder R, Hedli CC. An overview of benzene metabolism. Environ Health Perspect. 1996; 104: 1165-71. (Pubitemid 27046143)
56. Nakayama A, Noguchi Y, Mori T, Morisawa S, Yagi T. Comparison of mutagenic potentials and mutation spectra of benzene metabolites using supF shuttle vectors in human cells. Mutagenesis. 2004; 19: 91-7. (Pubitemid 38380285)
57. Nakayama A, Koyoshi S, Morisawa S, Yagi T. Comparison of the mutations induced by p-benzoquinone, a benzene metabolite, in human and mouse cells. Mutat Res. 2000; 470: 147-53.
58. Sharma S, Helchowski CM, Canman CE. The roles of DNA polymerase z and the Y family DNA polymerases in promoting or preventing genome instability. Mutat Res. 2013; 743-744: 97-110.
59. Sale JE, Lehmann AR, Woodgate R. Y-family DNA polymerases and their role in tolerance of cellular DNA damage. Nat Rev Mol Cell Biol. 2012; 13: 141-52.
60. Sawai T, Kawanishi M, Takamura-Enya T, Yagi T. Establishment of a method for analyzing translesion DNA synthesis across a single bulky adduct in human cells. Genes Environ. 2009; 31: 24-30.
61. Punchihewa C, Inoue A, Hishiki A, Fujikawa Y, Connelly M, Evison B, Shao Y, Heath R, Kuraoka I, Rodrigues P, Hashimoto H, Kawanishi M, Sato M, Yagi T, Fujii N. Identication of small molecule proliferating cell nuclear antigen (PCNA) inhibitor that disrupts interactions with PIP-box proteins and inhibits DNA replication. J Biol Chem. 2012; 287: 14289-300.
62. Kawanishi M, Fujikawa Y, Ishii H, Nishida H, Higashigaki Y, Kanno T, Matsuda T, Takamura-Enya T, Yagi T. Adduct formation and repair, and translesion DNA synthesis across the adducts in human cells exposed to 3-nitrobenzanthrone. Mutat Res. 2013; 753: 93-100.