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Volumn 13, Issue 1, 2013, Pages

Diversity and history of the long-chain acyl-CoA synthetase (Acsl) gene family in vertebrates

Author keywords

Acsl2; acyl CoA long chain synthetase; Differential paralogue retention; Gene loss; Genome duplication

Indexed keywords

ENZYME ACTIVITY; ESTER; FATTY ACID; GENE EXPRESSION; GENE TRANSFER; GENOMICS; METABOLISM; PHYLOGENETICS; PHYSIOLOGY; POPULATION GENETICS; VERTEBRATE;

EID: 84890005177     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-13-271     Document Type: Article
Times cited : (67)

References (41)
  • 3
    • 80052354482 scopus 로고    scopus 로고
    • Whole genome duplication: Challenges and considerations associated with sequence orthology assignment in Salmoninae
    • 10.1111/j.1095-8649.2011.03030.x 21884100
    • Whole genome duplication: challenges and considerations associated with sequence orthology assignment in Salmoninae. Moghadam HK, Ferguson MM, Danzmann RG, J Fish Biol 2011 79 3 561 574 10.1111/j.1095-8649.2011.03030.x 21884100
    • (2011) J Fish Biol , vol.79 , Issue.3 , pp. 561-574
    • Moghadam, H.K.1    Ferguson, M.M.2    Danzmann, R.G.3
  • 4
    • 84873161136 scopus 로고    scopus 로고
    • An independent genome duplication inferred from Hox paralogs in the American paddlefish-A representative basal ray-finned fish and important comparative reference
    • An independent genome duplication inferred from Hox paralogs in the American paddlefish-a representative basal ray-finned fish and important comparative reference. Crow KD, Smith CD, Cheng J-F, Wagner GP, Amemiya CT, Genome Biol Evol 2012
    • (2012) Genome Biol Evol
    • Crow, K.D.1    Smith, C.D.2    Cheng, J.-F.3    Wagner, G.P.4    Amemiya, C.T.5
  • 7
    • 77957224735 scopus 로고    scopus 로고
    • Parallel retention of Pdx2 genes in cartilaginous fish and coelacanths
    • 10.1093/molbev/msq121 20463047
    • Parallel retention of Pdx2 genes in cartilaginous fish and coelacanths. Mulley JF, Holland PWH, Mol Biol Evol 2010 27 10 2386 2391 10.1093/molbev/msq121 20463047
    • (2010) Mol Biol Evol , vol.27 , Issue.10 , pp. 2386-2391
    • Mulley, J.F.1    Holland, P.W.H.2
  • 9
    • 78650498923 scopus 로고    scopus 로고
    • Differential evolution of voltage-gated sodium channels in tetrapods and teleost fishes
    • 10.1093/molbev/msq257 20924084
    • Differential evolution of voltage-gated sodium channels in tetrapods and teleost fishes. Widmark J, Sundström G, Ocampo Daza D, Larhammar D, Mol Biol Evol 2011 28 1 859 871 10.1093/molbev/msq257 20924084
    • (2011) Mol Biol Evol , vol.28 , Issue.1 , pp. 859-871
    • Widmark, J.1    Sundström, G.2    Ocampo Daza, D.3    Larhammar, D.4
  • 10
    • 43249086785 scopus 로고    scopus 로고
    • Mammalian long-chain acyl-CoA synthetases
    • DOI 10.3181/0710-MR-287
    • Mammalian long-chain acyl-CoA synthetases. Soupene E, Kuypers FA, Exp Biol Med 2008 233 5 507 521 10.3181/0710-MR-287 (Pubitemid 351657352)
    • (2008) Experimental Biology and Medicine , vol.233 , Issue.5 , pp. 507-521
    • Soupene, E.1    Kuypers, F.A.2
  • 12
    • 37249092959 scopus 로고    scopus 로고
    • Evidence for 26 distinct acyl-coenzyme A synthetase genes in the human genome
    • DOI 10.1194/jlr.M700378-JLR200
    • Evidence for 26 distinct acyl-coenzyme A synthetase genes in the human genome. Watkins PA, Maiguel D, Jia Z, Pevsner J, J Lipid Res 2007 48 12 2736 2750 10.1194/jlr.M700378-JLR200 17762044 (Pubitemid 350272858)
    • (2007) Journal of Lipid Research , vol.48 , Issue.12 , pp. 2736-2750
    • Watkins, P.A.1    Maiguel, D.2    Jia, Z.3    Pevsner, J.4
  • 14
    • 33845542745 scopus 로고    scopus 로고
    • Molecular mechanisms of insulin resistance in humans and their potential links with mitochondrial dysfunction
    • 17130651
    • Molecular mechanisms of insulin resistance in humans and their potential links with mitochondrial dysfunction. Morino K, Petersen KF, Shulman GI, Diabetes 2006 55 Supplement 2 9 S15 17130651
    • (2006) Diabetes , vol.55 , Issue.SUPPL. 2
    • Morino, K.1    Petersen, K.F.2    Shulman, G.I.3
  • 17
    • 0034633638 scopus 로고    scopus 로고
    • Intracellular unesterified arachidonic acid signals apoptosis
    • 10.1073/pnas.200367597 11005842
    • Intracellular unesterified arachidonic acid signals apoptosis. Cao Y, Pearman AT, Zimmerman GA, McIntyre TM, Prescott SM, Proc Natl Acad Sci 2000 97 21 11280 11285 10.1073/pnas.200367597 11005842
    • (2000) Proc Natl Acad Sci , vol.97 , Issue.21 , pp. 11280-11285
    • Cao, Y.1    Pearman, A.T.2    Zimmerman, G.A.3    McIntyre, T.M.4    Prescott, S.M.5
  • 19
    • 4444258810 scopus 로고    scopus 로고
    • Fatty acyl CoA synthetase from Antarctic notothenioid fishes may influence substrate specificity of fat oxidation
    • DOI 10.1016/j.cbpc.2004.06.005, PII S1096495904001587
    • Fatty acyl CoA synthetase from Antarctic notothenioid fishes may influence substrate specificity of fat oxidation. Grove TJ, Sidell BD, Comp Biochem Physiol B Biochem Mol Biol 2004 139 1 53 63 10.1016/j.cbpc.2004.06.005 15364288 (Pubitemid 39208646)
    • (2004) Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology , vol.139 , Issue.1 , pp. 53-63
    • Grove, T.J.1    Sidell, B.D.2
  • 20
    • 70349452139 scopus 로고    scopus 로고
    • Highly unsaturated fatty acid synthesis in Atlantic salmon: Characterization of ELOVL5- and ELOVL2-like elongases
    • 10.1007/s10126-009-9179-0
    • Highly unsaturated fatty acid synthesis in Atlantic salmon: characterization of ELOVL5- and ELOVL2-like elongases. Morais S, Monroig O, Zheng X, Leaver M, Tocher D, Marine Biotechnol 2009 11 5 627 639 10.1007/s10126-009-9179-0
    • (2009) Marine Biotechnol , vol.11 , Issue.5 , pp. 627-639
    • Morais, S.1    Monroig, O.2    Zheng, X.3    Leaver, M.4    Tocher, D.5
  • 21
    • 84862829496 scopus 로고    scopus 로고
    • A novel acetyl-CoA synthetase short-chain subfamily member 1 (Acss1) gene indicates a dynamic history of paralogue retention and loss in vertebrates
    • A novel acetyl-CoA synthetase short-chain subfamily member 1 (Acss1) gene indicates a dynamic history of paralogue retention and loss in vertebrates. Castro LFC, Lopes-Marques M, Wilson JM, Rocha E, Reis-Henriques MA, Santos MM, Cunha I, Gene 2012 0
    • (2012) Gene , Issue.0
    • Castro, L.F.C.1    Lopes-Marques, M.2    Wilson, J.M.3    Rocha, E.4    Reis-Henriques, M.A.5    Santos, M.M.6    Cunha, I.7
  • 22
    • 69449086580 scopus 로고    scopus 로고
    • Ontogeny and nutritional control of adipogenesis in zebrafish (Danio rerio)
    • 10.1194/jlr.M800590-JLR200 19366995
    • Ontogeny and nutritional control of adipogenesis in zebrafish (Danio rerio). Flynn EJ, Trent CM, Rawls JF, J Lipid Res 2009 50 8 1641 1652 10.1194/jlr.M800590-JLR200 19366995
    • (2009) J Lipid Res , vol.50 , Issue.8 , pp. 1641-1652
    • Flynn, E.J.1    Trent, C.M.2    Rawls, J.F.3
  • 23
    • 80051478843 scopus 로고    scopus 로고
    • Genome evolution and meiotic maps by massively parallel DNA sequencing: Spotted Gar, an outgroup for the teleost genome duplication
    • 10.1534/genetics.111.127324 21828280
    • Genome evolution and meiotic maps by massively parallel DNA sequencing: spotted Gar, an outgroup for the teleost genome duplication. Amores A, Catchen J, Ferrara A, Fontenot Q, Postlethwait JH, Genetics 2011 188 4 799 808 10.1534/genetics.111.127324 21828280
    • (2011) Genetics , vol.188 , Issue.4 , pp. 799-808
    • Amores, A.1    Catchen, J.2    Ferrara, A.3    Fontenot, Q.4    Postlethwait, J.H.5
  • 24
    • 0034618661 scopus 로고    scopus 로고
    • Evidence for 14 homeobox gene clusters in human genome ancestry
    • 10.1016/S0960-9822(00)00676-X 10996074
    • Evidence for 14 homeobox gene clusters in human genome ancestry. Pollard SL, Holland PWH, Curr Biol 2000 10 17 1059 1062 10.1016/S0960-9822(00)00676-X 10996074
    • (2000) Curr Biol , vol.10 , Issue.17 , pp. 1059-1062
    • Pollard, S.L.1    Holland, P.W.H.2
  • 25
    • 0141454675 scopus 로고    scopus 로고
    • Chromosomal mapping of ANTP class homeobox genes in amphioxus: Piecing together ancestral genomes
    • DOI 10.1046/j.1525-142X.2003.03052.x
    • Chromosomal mapping of ANTP class homeobox genes in amphioxus: piecing together ancestral genomes. Castro LFC, Holland PWH, Evol Dev 2003 5 5 459 465 10.1046/j.1525-142X.2003.03052.x 12950625 (Pubitemid 37143922)
    • (2003) Evolution and Development , vol.5 , Issue.5 , pp. 459-465
    • Castro, L.F.C.1    Holland, P.W.H.2
  • 27
    • 34548420992 scopus 로고    scopus 로고
    • Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates
    • DOI 10.1101/gr.6316407
    • Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates. Nakatani Y, Takeda H, Kohara Y, Morishita S, Genome Res 2007 17 9 1254 1265 10.1101/gr.6316407 17652425 (Pubitemid 47360900)
    • (2007) Genome Research , vol.17 , Issue.9 , pp. 1254-1265
    • Nakatani, Y.1    Takeda, H.2    Kohara, Y.3    Morishita, S.4
  • 28
    • 33748752324 scopus 로고    scopus 로고
    • Rat long-chain acyl-CoA synthetase mRNA, protein, and activity vary in tissue distribution and in response to diet
    • DOI 10.1194/jlr.M600150-JLR200
    • Rat long-chain acyl-CoA synthetase mRNA, protein, and activity vary in tissue distribution and in response to diet. Mashek DG, Li LO, Coleman RA, J Lipid Res 2006 47 9 2004 2010 10.1194/jlr.M600150-JLR200 16772660 (Pubitemid 44401988)
    • (2006) Journal of Lipid Research , vol.47 , Issue.9 , pp. 2004-2010
    • Mashek, D.G.1    Li, L.O.2    Coleman, R.A.3
  • 29
    • 84863130946 scopus 로고    scopus 로고
    • Functional Desaturase Fads1 (Δ5) and Fads2 (Δ6) Orthologues Evolved before the Origin of Jawed Vertebrates
    • 10.1371/journal.pone.0031950 22384110
    • Functional Desaturase Fads1 (Δ5) and Fads2 (Δ6) Orthologues Evolved before the Origin of Jawed Vertebrates. Castro LFC, Monroig Ó Leaver MJ, Wilson J, Cunha I, Tocher DR, PLoS ONE 2012 7 2 31950 10.1371/journal.pone.0031950 22384110
    • (2012) PLoS ONE , vol.7 , Issue.2 , pp. 531950
    • Castro, L.F.C.1    Monroig, Ó.2    Leaver, M.J.3    Wilson, J.4    Cunha, I.5    Tocher, D.R.6
  • 30
    • 79956002928 scopus 로고    scopus 로고
    • The evolutionary history of the stearoyl-CoA desaturase gene family in vertebrates
    • 10.1186/1471-2148-11-132 21595943
    • The evolutionary history of the stearoyl-CoA desaturase gene family in vertebrates. Castro LFC, Wilson J, Goncalves O, Galante-Oliveira S, Rocha E, Cunha I, BMC Evol Biol 2011 11 1 132 10.1186/1471-2148-11-132 21595943
    • (2011) BMC Evol Biol , vol.11 , Issue.1 , pp. 132
    • Castro, L.F.C.1    Wilson, J.2    Goncalves, O.3    Galante-Oliveira, S.4    Rocha, E.5    Cunha, I.6
  • 31
    • 0029953175 scopus 로고    scopus 로고
    • Molecular characterization and expression of rat Acyl-CoA synthetase 3
    • DOI 10.1074/jbc.271.28.16748
    • Molecular characterization and expression of Rat acyl-CoA synthetase 3. Fujino T, Kang M-J, Suzuki H, Iijima H, Yamamoto T, J Biol Chem 1996 271 28 16748 16752 10.1074/jbc.271.28.16748 8663269 (Pubitemid 26239039)
    • (1996) Journal of Biological Chemistry , vol.271 , Issue.28 , pp. 16748-16752
    • Fujino, T.1    Rang, M.-J.2    Suzuki, H.3    Iijima, H.4    Yamamoto, T.5
  • 34
    • 77951570260 scopus 로고    scopus 로고
    • Activity of the acyl-CoA synthetase ACSL6 isoforms: Role of the fatty acid Gate-domains
    • 10.1186/1471-2091-11-18 20429931
    • Activity of the acyl-CoA synthetase ACSL6 isoforms: role of the fatty acid Gate-domains. Soupene E, Dinh N, Siliakus M, Kuypers F, BMC Biochem 2010 11 1 18 10.1186/1471-2091-11-18 20429931
    • (2010) BMC Biochem , vol.11 , Issue.1 , pp. 18
    • Soupene, E.1    Dinh, N.2    Siliakus, M.3    Kuypers, F.4
  • 35
    • 77955019084 scopus 로고    scopus 로고
    • Parallelization of the MAFFT multiple sequence alignment program
    • 10.1093/bioinformatics/btq224 20427515
    • Parallelization of the MAFFT multiple sequence alignment program. Katoh K, Toh H, Bioinformatics 2010 26 15 1899 1900 10.1093/bioinformatics/btq224 20427515
    • (2010) Bioinformatics , vol.26 , Issue.15 , pp. 1899-1900
    • Katoh, K.1    Toh, H.2
  • 36
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: Selection of best-fit models of protein evolution
    • DOI 10.1093/bioinformatics/bti263
    • ProtTest: selection of best-fit models of protein evolution. Abascal F, Zardoya R, Posada D, Bioinformatics 2009 21 9 2104 2105 (Pubitemid 40668057)
    • (2005) Bioinformatics , vol.21 , Issue.9 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 37
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • DOI 10.1093/bioinformatics/btg180
    • MrBayes 3: Bayesian phylogenetic inference under mixed models. Ronquist F, Huelsenbeck JP, Bioinformatics 2003 19 12 1572 1574 10.1093/bioinformatics/ btg180 12912839 (Pubitemid 37038874)
    • (2003) Bioinformatics , vol.19 , Issue.12 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 41
    • 0037314097 scopus 로고    scopus 로고
    • Matrix2png: A utility for visualizing matrix data
    • DOI 10.1093/bioinformatics/19.2.295
    • Matrix2png: a utility for visualizing matrix data. Pavlidis P, Noble WS, Bioinformatics 2003 19 2 295 296 10.1093/bioinformatics/19.2.295 12538257 (Pubitemid 36181920)
    • (2003) Bioinformatics , vol.19 , Issue.2 , pp. 295-296
    • Pavlidis, P.1    Stafford Noble, W.2


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