-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0242384034
-
Review and re-analysis of domain-specific 16S primers. J. Microbiol
-
Baker, G. C., J. J. Smith, and D. A. Cowan. 2003. Review and re-analysis of domain-specific 16S primers. J. Microbiol. Methods. 55:541-555.
-
(2003)
Methods.
, vol.55
, pp. 541-555
-
-
Baker, G.C.1
Smith, J.J.2
Cowan, D.A.3
-
3
-
-
84863294161
-
Microbial to reef scale interactions between the reef-building coral Montastraea annularis and benthic algae
-
Barott, K. L., B. Rodriguez-Mueller, M. Youle, K. L. Marhaver, M. J. A. Vermeij, J. E. Smith, et al. 2012. Microbial to reef scale interactions between the reef-building coral Montastraea annularis and benthic algae. Proc. Biol. Sci. 279:1655-1664.
-
(2012)
Proc. Biol. Sci.
, vol.279
, pp. 1655-1664
-
-
Barott, K.L.1
Rodriguez-Mueller, B.2
Youle, M.3
Marhaver, K.L.4
Vermeij, M.J.A.5
Smith, J.E.6
-
4
-
-
52949133356
-
Physiology, phylogeny and in situ evidence for bacterial and archaeal nitrifiers in the marine sponge Aplysina aerophoba
-
Bayer, K., S. Schmitt, and U. Hentschel. 2008. Physiology, phylogeny and in situ evidence for bacterial and archaeal nitrifiers in the marine sponge Aplysina aerophoba. Environ. Microbiol. 10:2942-2955.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 2942-2955
-
-
Bayer, K.1
Schmitt, S.2
Hentschel, U.3
-
5
-
-
79551476785
-
Depicting more accurate pictures of protistan community complexity using pyrosequencing of hypervariable SSU rRNA gene regions
-
Behnke, A., M. Engel, R. Christen, M. Nebel, R. R. Klein, and T. Stoeck. 2010. Depicting more accurate pictures of protistan community complexity using pyrosequencing of hypervariable SSU rRNA gene regions. Environ. Microbiol. 13:340-349.
-
(2010)
Environ. Microbiol.
, vol.13
, pp. 340-349
-
-
Behnke, A.1
Engel, M.2
Christen, R.3
Nebel, M.4
Klein, R.R.5
Stoeck, T.6
-
6
-
-
0004252920
-
-
Hutchinson and Co. Ltd., London, U.K.
-
Bergquist, P. R. 1978. Sponges. Hutchinson and Co. Ltd., London, U.K.
-
(1978)
Sponges
-
-
Bergquist, P.R.1
-
7
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J. G. 2010. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods 7:335-336.
-
(2010)
Nat. Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
-
8
-
-
0027804103
-
Non-parametric multivariate analyses of changes in community structure
-
Clark, K. R. 1993. Non-parametric multivariate analyses of changes in community structure. Aust. J. Ecol. 18:117-143.
-
(1993)
Aust. J. Ecol.
, vol.18
, pp. 117-143
-
-
Clark, K.R.1
-
10
-
-
0001972564
-
Overview: laboratory experiments, field experiments, and natural experiments
-
in J. Diamond, T. J. Case, eds. Harper and Row, New York, NY.
-
Diamond, J. 1986. Overview: laboratory experiments, field experiments, and natural experiments. Pp. 3-22 in J. Diamond, T. J. Case, eds. Community ecology. Harper and Row, New York, NY.
-
(1986)
Community ecology
, pp. 3-22
-
-
Diamond, J.1
-
11
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar, R. C. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26:2460-2461.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
12
-
-
84862998261
-
Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts
-
Fan, L., D. Reynolds, M. Liu, M. Stark, S. Kjelleberg, N. S. Webster, et al. 2012. Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts. Proc. Natl Acad. Sci. 109:e1878-e1887.
-
(2012)
Proc. Natl Acad. Sci.
, vol.109
-
-
Fan, L.1
Reynolds, D.2
Liu, M.3
Stark, M.4
Kjelleberg, S.5
Webster, N.S.6
-
13
-
-
77956985619
-
Nitrogen fixation and nitrogen transformations in marine symbioses
-
Fiore, C. L., J. K. Jarett, N. D. Olson, and M. P. Lesser. 2010. Nitrogen fixation and nitrogen transformations in marine symbioses. Trends Microbiol. 18:455-463.
-
(2010)
Trends Microbiol.
, vol.18
, pp. 455-463
-
-
Fiore, C.L.1
Jarett, J.K.2
Olson, N.D.3
Lesser, M.P.4
-
14
-
-
84883127931
-
Nitrogen biogeochemistry in the Caribbean sponge, Xestospongia muta: a source or sink of dissolved inorganic nitrogen?
-
Fiore, C. L., J. K. Jarett, and M. P. Lesser. 2013. Nitrogen biogeochemistry in the Caribbean sponge, Xestospongia muta: a source or sink of dissolved inorganic nitrogen? PLoS ONE 8:e72961.
-
(2013)
PLoS ONE
, vol.8
-
-
Fiore, C.L.1
Jarett, J.K.2
Lesser, M.P.3
-
15
-
-
79960968267
-
Complex interactions between marine sponges and their symbiotic microbial communities
-
Freeman, C. J., and R. W. Thacker. 2011. Complex interactions between marine sponges and their symbiotic microbial communities. Limnol. Oceangr. 56:1577-1586.
-
(2011)
Limnol. Oceangr.
, vol.56
, pp. 1577-1586
-
-
Freeman, C.J.1
Thacker, R.W.2
-
16
-
-
79952006773
-
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
-
Haas, B. J., D. Gevers, A. M. Earl, M. Feldgarden, D. V. Ward, G. Giannoukos, et al. 2011. Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. Genome Res. 21:494-504.
-
(2011)
Genome Res.
, vol.21
, pp. 494-504
-
-
Haas, B.J.1
Gevers, D.2
Earl, A.M.3
Feldgarden, M.4
Ward, D.V.5
Giannoukos, G.6
-
17
-
-
33646260901
-
Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine crenarchaeota
-
Hallam, S. J., T. J. Mincer, C. Schleper, C. M. Preston, K. Roberts, P. M. Richardson, et al. 2006. Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine crenarchaeota. PLoS Biol. 4:e95.
-
(2006)
PLoS Biol.
, vol.4
-
-
Hallam, S.J.1
Mincer, T.J.2
Schleper, C.3
Preston, C.M.4
Roberts, K.5
Richardson, P.M.6
-
18
-
-
73449128271
-
Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data
-
Hamady, M., C. Lozupone, and R. Knight. 2009. Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data. ISME J. 4:17-27.
-
(2009)
ISME J.
, vol.4
, pp. 17-27
-
-
Hamady, M.1
Lozupone, C.2
Knight, R.3
-
19
-
-
84868628461
-
Diversity, physiology, and niche differentiation of ammonia-oxidizing archaea
-
Hatzenpichler, R. 2012. Diversity, physiology, and niche differentiation of ammonia-oxidizing archaea. Appl. Environ. Microbiol. 78:7501-7510.
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, pp. 7501-7510
-
-
Hatzenpichler, R.1
-
20
-
-
0036729439
-
Molecular evidence for a uniform microbial community in sponges form different oceans
-
Hentschel, U., J. Hopke, M. Horn, A. B. Friedrich, M. Wagner, J. Hacker, et al. 2002. Molecular evidence for a uniform microbial community in sponges form different oceans. Appl. Environ. Microbiol. 68:4431-4440.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 4431-4440
-
-
Hentschel, U.1
Hopke, J.2
Horn, M.3
Friedrich, A.B.4
Wagner, M.5
Hacker, J.6
-
22
-
-
18444408108
-
Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean
-
Herndl, G. J., T. Reinthaler, E. Teira, H. van Aken, C. Veth, A. Pernthaler, et al. 2005. Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean. Appl. Environ. Microbiol. 71:2303-2309.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 2303-2309
-
-
Herndl, G.J.1
Reinthaler, T.2
Teira, E.3
van Aken, H.4
Veth, C.5
Pernthaler, A.6
-
23
-
-
17744385297
-
An anaerobic world in sponges
-
Hoffmann, F., O. Larsen, V. Thiel, H. T. Rapp, T. Pape, W. Michaelis, et al. 2005. An anaerobic world in sponges. Geomicrobiol J. 22:1-10.
-
(2005)
Geomicrobiol J.
, vol.22
, pp. 1-10
-
-
Hoffmann, F.1
Larsen, O.2
Thiel, V.3
Rapp, H.T.4
Pape, T.5
Michaelis, W.6
-
24
-
-
84889661112
-
-
Effects of nitrogen-fixing symbiotic bacteria on the microbial ecology of the coral Montastrea cavernosa. Ph.D. diss.University of New Hampshire, Durham, NH.
-
Jarett, J. K. 2012. Effects of nitrogen-fixing symbiotic bacteria on the microbial ecology of the coral Montastrea cavernosa. Ph.D. diss.University of New Hampshire, Durham, NH.
-
(2012)
-
-
Jarett, J.K.1
-
25
-
-
73349110099
-
Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates
-
Kunin, V., A. Engelbrekston, H. Ochman, and P. Hugenholtz. 2010. Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates. Environ. Microbiol. 12:118-123.
-
(2010)
Environ. Microbiol.
, vol.12
, pp. 118-123
-
-
Kunin, V.1
Engelbrekston, A.2
Ochman, H.3
Hugenholtz, P.4
-
26
-
-
79953028506
-
Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea
-
Lee, O. O., Y. Wang, J. Yang, F. F. Lafi, A. Al-Suwailem, and P.-Y. Qian. 2010. Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea. ISME J. 5:650-664.
-
(2010)
ISME J.
, vol.5
, pp. 650-664
-
-
Lee, O.O.1
Wang, Y.2
Yang, J.3
Lafi, F.F.4
Al-Suwailem, A.5
Qian, P.-Y.6
-
28
-
-
35549007148
-
Short pyrosequencing reads suffice for accurate microbial community analysis
-
doi: 10.1093/nar/gkm541
-
Liu, Z., C. Lozupone, M. Hamady, F. D. Bushman, and R. Knight. 2007. Short pyrosequencing reads suffice for accurate microbial community analysis. Nucleic Acids Res. 35:e120. doi: 10.1093/nar/gkm541
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Liu, Z.1
Lozupone, C.2
Hamady, M.3
Bushman, F.D.4
Knight, R.5
-
29
-
-
77958043038
-
Effects of sponge bleaching on ammonia-oxidizing Archaea: distribution and relative expression of ammonia monooxygenase genes associated with the barrel sponge Xestospongia muta
-
Lopez-Legentil, S., P. M. Erwin, J. R. Pawlik, and B. Song. 2010. Effects of sponge bleaching on ammonia-oxidizing Archaea: distribution and relative expression of ammonia monooxygenase genes associated with the barrel sponge Xestospongia muta. Microb. Ecol. 60:561-571.
-
(2010)
Microb. Ecol.
, vol.60
, pp. 561-571
-
-
Lopez-Legentil, S.1
Erwin, P.M.2
Pawlik, J.R.3
Song, B.4
-
30
-
-
2542523843
-
ARB: a software environment for sequence data
-
Ludwig, W. 2004. ARB: a software environment for sequence data. Nucleic Acids Res. 32:1363-1371.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
-
31
-
-
0031895203
-
Bacterial phylogeny based on comparative sequence analysis
-
Ludwig, W., O. Strunk, S. Klugbauer, N. Klugbauer, M. Weizenegger, J. Neumaier, et al. 1998. Bacterial phylogeny based on comparative sequence analysis. Electrophoresis 19:554-568.
-
(1998)
Electrophoresis
, vol.19
, pp. 554-568
-
-
Ludwig, W.1
Strunk, O.2
Klugbauer, S.3
Klugbauer, N.4
Weizenegger, M.5
Neumaier, J.6
-
32
-
-
31544448331
-
Microbial biogeography: putting microorganisms on the map
-
Martiny, J. B., B. J. Bohannan, J. H. Brown, R. K. Colwell, J. A. Fuhrman, J. L. Green, et al. 2006. Microbial biogeography: putting microorganisms on the map. Nat. Rev. Microbiol. 4:102-112.
-
(2006)
Nat. Rev. Microbiol.
, vol.4
, pp. 102-112
-
-
Martiny, J.B.1
Bohannan, B.J.2
Brown, J.H.3
Colwell, R.K.4
Fuhrman, J.A.5
Green, J.L.6
-
33
-
-
48749126780
-
Redwood of the reef: growth and age of the giant barrel sponge Xestospongia muta in the Florida Keys
-
McMurray, S. E., J. E. Blum, and J. R. Pawlik. 2008. Redwood of the reef: growth and age of the giant barrel sponge Xestospongia muta in the Florida Keys. Mar. Biol. 155:159-171.
-
(2008)
Mar. Biol.
, vol.155
, pp. 159-171
-
-
McMurray, S.E.1
Blum, J.E.2
Pawlik, J.R.3
-
34
-
-
82955194453
-
Sponge-Associated Bacteria Are Strictly Maintained in Two Closely Related but Geographically Distant Sponge Hosts
-
Montalvo, N. F., and R. T. Hill. 2011. Sponge-Associated Bacteria Are Strictly Maintained in Two Closely Related but Geographically Distant Sponge Hosts. Appl. Environ. Microbiol. 77:7207-7216.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 7207-7216
-
-
Montalvo, N.F.1
Hill, R.T.2
-
35
-
-
84889655660
-
-
VENNY. An interactive tool for comparing lists with Venn Diagrams. Available at, (accessed 19 August 2013).
-
Oliveros, J. C. 2007 VENNY. An interactive tool for comparing lists with Venn Diagrams. Available at http://bioinfogp.cnb.csic.es/tools/venny/index.html (accessed 19 August 2013).
-
(2007)
-
-
Oliveros, J.C.1
-
36
-
-
84879410037
-
Characterizing the bacterial associates of three Caribbean sponges along a gradient from shallow to mesophotic depths
-
Olson, J. B., and X. Gao. 2013. Characterizing the bacterial associates of three Caribbean sponges along a gradient from shallow to mesophotic depths. FEMS Microbiol. Ecol. 85:74-84.
-
(2013)
FEMS Microbiol. Ecol.
, vol.85
, pp. 74-84
-
-
Olson, J.B.1
Gao, X.2
-
37
-
-
33846914243
-
Global patterns of diversity and community structure in marine bacterioplankton
-
Pommier, T., B. Canback, L. Riemann, K. H. Bostrom, K. Simu, P. Lundberg, et al. 2007. Global patterns of diversity and community structure in marine bacterioplankton. Mol. Ecol. 16:867-880.
-
(2007)
Mol. Ecol.
, vol.16
, pp. 867-880
-
-
Pommier, T.1
Canback, B.2
Riemann, L.3
Bostrom, K.H.4
Simu, K.5
Lundberg, P.6
-
38
-
-
77949718257
-
FastTree 2 - approximately maximum-likelihood trees for large alignments
-
doi:10.1371/journal.pone.0009490
-
Price, M. N., P. S. Dehal, and A. P. Arkin. 2010. FastTree 2 - approximately maximum-likelihood trees for large alignments. PLoS ONE 5:e9490. doi:10.1371/journal.pone.0009490
-
(2010)
PLoS ONE
, vol.5
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
39
-
-
37549027613
-
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
-
Pruesse, E., C. Quast, K. Knittel, B. M. Fuchs, W. Ludwig, J. Peplies, et al. 2007. SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res. 35:7188-7196.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 7188-7196
-
-
Pruesse, E.1
Quast, C.2
Knittel, K.3
Fuchs, B.M.4
Ludwig, W.5
Peplies, J.6
-
40
-
-
69549112742
-
Accurate determination of microbial diversity from 454 pyrosequencing data
-
Quince, C., A. Lanzen, T. P. Curtis, R. J. Davenport, N. Hall, I. M. Head, et al. 2009. Accurate determination of microbial diversity from 454 pyrosequencing data. Nat. Methods 6:639-641.
-
(2009)
Nat. Methods
, vol.6
, pp. 639-641
-
-
Quince, C.1
Lanzen, A.2
Curtis, T.P.3
Davenport, R.J.4
Hall, N.5
Head, I.M.6
-
41
-
-
0030865449
-
Characterization of a DNA polymerase from the uncultivated psychrophilic archaeon Cenarchaum sybiosum
-
Schleper, C., R. V. Swanson, E. J. Mathur, and E. F. DeLong. 1997. Characterization of a DNA polymerase from the uncultivated psychrophilic archaeon Cenarchaum sybiosum. J. Bacteriol. 179:7803-7811.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 7803-7811
-
-
Schleper, C.1
Swanson, R.V.2
Mathur, E.J.3
DeLong, E.F.4
-
42
-
-
57449117293
-
Molecular microbial diversity survey of sponge reproductive stages and mechanistic insights into vertical transmission of microbial symbionts
-
Schmitt, S., H. Angermeier, R. Schiller, N. Lindquist, and U. Hentschel. 2008. Molecular microbial diversity survey of sponge reproductive stages and mechanistic insights into vertical transmission of microbial symbionts. Appl. Environ. Microbiol. 74:7694-7708.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 7694-7708
-
-
Schmitt, S.1
Angermeier, H.2
Schiller, R.3
Lindquist, N.4
Hentschel, U.5
-
43
-
-
84857121586
-
Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges
-
Schmitt, S., P. Tsai, J. Bell, J. Fromont, M. Ilan, N. Lindquist, et al. 2011. Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges. ISME J. 6:564-576.
-
(2011)
ISME J.
, vol.6
, pp. 564-576
-
-
Schmitt, S.1
Tsai, P.2
Bell, J.3
Fromont, J.4
Ilan, M.5
Lindquist, N.6
-
44
-
-
0001881618
-
Preservation of avian blood and tissue samples for DNA analyses
-
Seutin, G., B. N. White, and P. T. Boag. 1991. Preservation of avian blood and tissue samples for DNA analyses. Can. J. Zool. 69:82-90.
-
(1991)
Can. J. Zool.
, vol.69
, pp. 82-90
-
-
Seutin, G.1
White, B.N.2
Boag, P.T.3
-
45
-
-
78650591665
-
Single-cell genomics reveals the lifestyle of Poribacteria, a candidate phylum symbiotically associated with marine sponges
-
Siegl, A., J. Kamke, T. Hochmuth, J. O. R. Piel, M. Richter, C. Liang, et al. 2010. Single-cell genomics reveals the lifestyle of Poribacteria, a candidate phylum symbiotically associated with marine sponges. ISME J. 5:61-70.
-
(2010)
ISME J.
, vol.5
, pp. 61-70
-
-
Siegl, A.1
Kamke, J.2
Hochmuth, T.3
Piel, J.O.R.4
Richter, M.5
Liang, C.6
-
46
-
-
84856569941
-
Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms
-
Simister, R. L., P. Deines, E. S. Botté, N. S. Webster, and M. W. Taylor. 2012. Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms. Environ. Microbiol. 14:517-524.
-
(2012)
Environ. Microbiol.
, vol.14
, pp. 517-524
-
-
Simister, R.L.1
Deines, P.2
Botté, E.S.3
Webster, N.S.4
Taylor, M.W.5
-
47
-
-
33747073504
-
Microbial diversity in the deep sea and the underexplored "rare biosphere"
-
Sogin, M. L., H. G. Morrison, J. A. Huber, D. M. Welch, S. M. Huse, P. R. Neal, et al. 2006. Microbial diversity in the deep sea and the underexplored "rare biosphere". Proc. Natl Acad. Sci. USA 103:12115-12120.
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 12115-12120
-
-
Sogin, M.L.1
Morrison, H.G.2
Huber, J.A.3
Welch, D.M.4
Huse, S.M.5
Neal, P.R.6
-
48
-
-
37549030941
-
Nitrification controls on fluxes and isotopic composition of nitrate form Florida Keys sponges
-
Southwell, M. W., B. N. Popp, and C. S. Martens. 2008. Nitrification controls on fluxes and isotopic composition of nitrate form Florida Keys sponges. Mar. Chem. 108:96-108.
-
(2008)
Mar. Chem.
, vol.108
, pp. 96-108
-
-
Southwell, M.W.1
Popp, B.N.2
Martens, C.S.3
-
49
-
-
0030067991
-
Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
-
Suzuki, M. T., and S. J. Giovannoni. 1996. Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl. Environ. Microbiol. 62:625-630.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 625-630
-
-
Suzuki, M.T.1
Giovannoni, S.J.2
-
50
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura, K., D. Peterson, N. Peterson, G. Stecher, M. Nei, and S. Kumar. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 10:2731-2739.
-
(2011)
Mol. Biol. Evol.
, vol.10
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
51
-
-
34250733462
-
Sponge-associated microorganisms: evolution, ecology, and biotechnological potential
-
Taylor, M. W., R. Radax, D. Stegor, and M. Wagner. 2007. Sponge-associated microorganisms: evolution, ecology, and biotechnological potential. Microbiol. Mol. Biol. Rev. 71:1-53.
-
(2007)
Microbiol. Mol. Biol. Rev.
, vol.71
, pp. 1-53
-
-
Taylor, M.W.1
Radax, R.2
Stegor, D.3
Wagner, M.4
-
52
-
-
84872914192
-
'Sponge-specific' bacteria are widespread (but rare) in diverse marine environments
-
Taylor, M. W., P. Tsai, R. L. Simister, P. Deines, E. Botte, G. Ericson, et al. 2013. 'Sponge-specific' bacteria are widespread (but rare) in diverse marine environments. ISME J. 7:438-443.
-
(2013)
ISME J.
, vol.7
, pp. 438-443
-
-
Taylor, M.W.1
Tsai, P.2
Simister, R.L.3
Deines, P.4
Botte, E.5
Ericson, G.6
-
53
-
-
19944374459
-
Impacts of shading on sponge-cyanobacteria symbioses: a comparison between host-specific and generalist associations
-
Thacker, R. W. 2005. Impacts of shading on sponge-cyanobacteria symbioses: a comparison between host-specific and generalist associations. Integr. Comp. Biol. 45:369-376.
-
(2005)
Integr. Comp. Biol.
, vol.45
, pp. 369-376
-
-
Thacker, R.W.1
-
54
-
-
0032987699
-
Mid-chain branched alkanoic acids from "living fossil" demosponges: a link to ancient sedimentary lipids?
-
Thiel, V., A. Jenisch, G. Worheide, A. Loewenberg, J. Reitner, and W. Michaelis. 1999. Mid-chain branched alkanoic acids from "living fossil" demosponges: a link to ancient sedimentary lipids? Org. Geochem. 30:1-14.
-
(1999)
Org. Geochem.
, vol.30
, pp. 1-14
-
-
Thiel, V.1
Jenisch, A.2
Worheide, G.3
Loewenberg, A.4
Reitner, J.5
Michaelis, W.6
-
55
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
56
-
-
78651243709
-
Environmental shaping of sponge associated archaeal communities
-
Turque, A. S., D. Batista, C. B. Silveira, A. M. Cardoso, R. P. Vieira, et al. 2010. Environmental shaping of sponge associated archaeal communities. PLoS ONE 5:e15774.
-
(2010)
PLoS ONE
, vol.5
-
-
Turque, A.S.1
Batista, D.2
Silveira, C.B.3
Cardoso, A.M.4
Vieira, R.P.5
-
57
-
-
77954695132
-
Pryosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil
-
Uroz, S., M. Buée, C. Murat, P. Frey-Klett, and F. Martin. 2010. Pryosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil. Environ. Microbiol. Rep. 2:281-288.
-
(2010)
Environ. Microbiol. Rep.
, vol.2
, pp. 281-288
-
-
Uroz, S.1
Buée, M.2
Murat, C.3
Frey-Klett, P.4
Martin, F.5
-
58
-
-
34548293679
-
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
-
Wang, Q., G. M. Garrity, J. M. Tiedje, and J. R. Cole. 2007. Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy. Appl. Environ. Microbiol. 73:5261-5267.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
59
-
-
77955263252
-
Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts
-
Webster, N. S., M. W. Taylor, F. Behnam, S. Lücker, T. Rattei, S. Whalan, et al. 2010. Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts. Environ. Microbiol. 12:2070-2082.
-
(2010)
Environ. Microbiol.
, vol.12
, pp. 2070-2082
-
-
Webster, N.S.1
Taylor, M.W.2
Behnam, F.3
Lücker, S.4
Rattei, T.5
Whalan, S.6
-
60
-
-
0021341090
-
Immunological evidence for the Precambrian origin of bacterial symbioses in marine sponges
-
Wilkinson, C. R. 1984. Immunological evidence for the Precambrian origin of bacterial symbioses in marine sponges. Proc. R. Soc. Lond. B Biol. Sci. 220:509-517.
-
(1984)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.220
, pp. 509-517
-
-
Wilkinson, C.R.1
|