Messenger RNA Trafficking in Living Cells

Single Particle Tracking and Single Molecule Energy Transfer

Volumn , Issue , 2009, Pages 43-65

  Kubitscheck, Ulrich ^a   Veith, Roman ^a   Ritter, Jörg ^a   Siebrasse, Jan Peter ^a  

^a UNIVERSITY OF BONN   (Germany)

Author keywords

Balbiani ring particles; High speed imaging; in vivo labeling; Light sheet based microscopy; MRNP dynamics; Optical sectioning; Single molecule fluorescence microscopy; Single particle tracking

Indexed keywords

EID: 84889469212     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/9783527628360.ch3     Document Type: Chapter

References (50)

1. Handwerger, K.E. and Gall, J.G. (2006) Trends Cell Biol., 16, 19.
2. Misteli, T. (2007) Cell, 128, 787.
3. Verkman, A.S. (2002) Trends Biochem. Sci., 27, 27.
4. Gorski, S.A., Dundr, M., and Misteli, T. (2006) Curr. Opin. Cell Biol., 18, 284.
5. Mueller, F., Wach, P., and McNally, J.G. (2008) Biophys. J., 94, 3323.
6. Braga, J., McNally, J.G., and Carmo-Fonseca, M. (2007) Biophys. J., 92, 2694.
7. Stutz, F. and Izaurralde, E. (2003) Trends Cell Biol., 13, 319.
8. Stewart, M. (2007) Mol. Cell, 25, 327.
9. Kohler, A. and Hurt, E. (2007) Nat. Rev. Mol. Cell. Biol., 8, 761.
10. Politz, J.C., Browne, E.S., Wolf, D.E., and Pederson, T. (1998) Proc. Natl Acad. Sci. USA, 95, 6043.
11. Politz, J.C., Tuft, R.A., Pederson, T., and Singer, R.H. (1999) Curr. Biol., 9, 285.
12. Cremer, T., Kurz, A., Zirbel, R., Dietzel, S., Rinke, B., Schrock, E., Speicher, M.R., Mathieu, U., Jauch, A., Emmerich, P., Scherthan, H., Ried, T., Cremer, C., and Lichter, P. (1993) Cold Spring Harbor Symp. Quant. Biol., LVIII, 777.
13. Calapez, A., Pereira, H., Calado, A., Braga, J., Rino, J., Carvalho, C., Tavanez, J., Wahle, E., Rosa, A., and Carmo-Fonseca, M. (2002) J. Cell Biol., 159, 795.
14. Molenaar, C., Abdulle, A., Gena, A., Tanke, H., and Dirks, R. (2004) J. Cell Biol., 165, 191.
15. Politz, J.C., Tuft, R.A., Prasanth, K.V., Baudendistel, N., Fogarty, K.E., Lifshitz, L.M., Langowski, J., Spector, D.L., and Pederson, T. (2006) Mol. Biol. Cell, 17, 1239.
16. Shav-Tal, Y., Darzacq, X., Shenoy, S.M., Fusco, D., Janicki, S.M., Spector, D.L., and Singer, R.H. (2004) Science, 304, 1797.
17. Vargas, D.Y., Raj, A., Marras, S.A., Kramer, F.R., and Tyagi, S. (2005) Proc. Natl Acad. Sci. USA, 102, 17008.
18. Siebrasse, J.P., Veith, R., Dobay, A., Leonhardt, H., Daneholt, B., and Kubitscheck, U. (2008) Proc. Natl Acad. Sci. USA, 105, 20291.
19. Daneholt, B. (2001) Chromosoma, 110, 173.
20. Wieslander, L. (1994) Prog. Nucleic Acid Res. Mol. Biol., 48, 275.
21. Kiseleva, E., Wurtz, T., Visa, N., and Daneholt, B. (1994) EMBO J., 13, 6052.
22. Skoglund, U., Andersson, K., Strandberg, B., and Daneholt, B. (1986) Nature, 319, 560.
23. Dreyfuss, G., Matunis, M.J., Pinol-Roma, S., and Burd, C.G. (1993) Annu. Rev. Biochem., 62, 289.
24. Kiesler, E. and Visa, N. (2004) Prog. Mol. Subcell. Biol., 35, 99.
25. Singh, O.P., Visa, N., Wieslander, L., and Daneholt, B. (2006) Chromosoma, 115, 449.
26. Visa, N., Alzhanova-Ericsson, A.T., Sun, X., Kiseleva, E., Bjorkroth, B., Wurtz, T., and Daneholt, B. (1996) Cell, 84, 253.
27. Percipalle, P., Fomproix, N., Kylberg, K., Miralles, F., Bjorkroth, B., Daneholt, B., and Visa, N. (2003) Proc. Natl Acad. Sci. USA, 100, 6475.
28. Singh, O.P., Bjorkroth, B., Masich, S., Wieslander, L., and Daneholt, B. (1999) Exp. Cell Res., 251, 135.
29. Miralles, F., Overstedt, L., Sabri, N., Aissouni, Y., Hellman, U., Skoglund, U., and Visa, N. (2000) J. Cell Biol., 148, 271.
30. Miralles, F. and Visa, N. (2001) Exp. Cell Res., 264, 284.
31. Lang, I., Scholz, M., and Peters, R. (1986) J. Cell Biol., 102, 1183.
32. Braeckmans, K., Peeters, L., Sanders, N.N., De Smedt, S.C., and Demeester, J. (2003) Biophys. J., 85, 2240.
33. Grunwald, D., Hoekstra, A., Dange, T., Buschmann, V., and Kubitscheck, U. (2006) ChemPhysChem, 7, 812.
34. Anderson, C.M., Georgiou, G.N., Morrison, I.E.G., Stevenson, G.V.W., and Cherry, R.J. (1992) J. Cell Sci., 101, 415.
35. Kues, T., Dickmanns, A., Lührmann, R., Peters, R., and Kubitscheck, U. (2001) Proc. Natl Acad. Sci. USA, 98, 12021.
36. Schutz, G.J., Schindler, H., and Schmidt, T. (1997) Biophys. J., 73, 1073.
37. Skoglund, U., Andersson, K., Bjorkroth, B., Lamb, M.M., and Daneholt, B. (1983) Cell, 34, 847.
38. Peters, R. (2007) Annu. Rev. Biophys. Biomol. Struct., 36, 371.
39. Joo, C., Balci, H., Ishitsuka, Y., Buranachai, C., and Ha, T. (2008) Annu. Rev. Biochem., 77, 51.
40. Siebrasse, J.P. and Kubitscheck, U. (2009) Methods Mol. Biol., 464, 343.
41. Grunwald, D., Martin, R.M., Buschmann, V., Bazett-Jones, D.P., Leonhardt, H., Kubitscheck, U., and Cardoso, M.C. (2008) Biophys. J., 94, 2847.
42. Siedentopf, H. and Zsigmondy, R. (1903) Ann. Physik., 4, 1.
43. Voie, A.H., Burns, D.H., and Spelman, F.A. (1993) J. Microsc., 170, 229.
44. Huisken, J., Swoger, J., Del Bene, F., Wittbrodt, J., and Stelzer, E.H. (2004) Science, 305, 1007.
45. Engelbrecht, C.J. and Stelzer, E.H. (2006) Opt. Lett., 31, 1477.
46. Dodt, H.U., Leischner, U., Schierloh, A., Jahrling, N., Mauch, C.P., Deininger, K., Deussing, J.M., Eder, M., Zieglgansberger, W., and Becker, K. (2007) Nat. Methods, 4, 331.
47. Huisken, J. and Stainier, D.Y. (2007) Opt. Lett., 32, 2608.
48. Ritter, J.G., Veith, R., Siebrasse, J.P., and Kubitscheck, U. (2008) Opt. Express, 16, 7142.
49. Kao, H.P. and Verkman, A.S. (1994) Biophys. J., 67, 1291.
50. Holtzer, L., Meckel, T., and Schmidt, T. (2007) Appl. Phys. Lett., 90, 053902.