Target analysis by integration of transcriptome and ChIP-seq data with BETA

Nature Protocols

Volumn 8, Issue 12, 2013, Pages 2502-2515

  Wang, Su ^a   Sun, Hanfei ^a   Ma, Jian ^a   Zang, Chongzhi ^b   Wang, Chenfei ^a   Wang, Juan ^a   Tang, Qianzi ^a   Meyer, Clifford A ^b   Zhang, Yong ^a   Liu, X Shirley ^b  

^a TONGJI UNIVERSITY   (China)

^b HARVARD SCHOOL OF PUBLIC HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTION FACTOR; TRANSCRIPTOME;

AR GENE; ARTICLE; BINDING AND EXPRESSION TARGET ANALYSIS; C1ORF116 GENE; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; DATA ANALYSIS SOFTWARE; DNA BINDING MOTIF; DNA INTEGRATION; DOWN REGULATION; ESR1 GENE; ESR2 GENE; ESRRA GENE; ESRRB GENE; ESRRG GENE; FKBP5 GENE; FOXA1 GENE; FOXA2 GENE; FOXB1 GENE; FOXC1 GENE; FOXC2 GENE; FOXH1 GENE; FOXJ1 GENE; GATA4 GENE; GENE; GENE CONTROL; GENE EXPRESSION REGULATION; HIGH THROUGHPUT SEQUENCING; HMGN4 GENE; INTERMETHOD COMPARISON; KLK2 GENE; MEIS1 GENE; MIR4638 GENE; NR2F1 GENE; NR3C1 GENE; NR3C2 GENE; NR4A1 GENE; NR4A2 GENE; NUCLEOTIDE SEQUENCE; PGR GENE; PPARG GENE; PREDICTION; PRIORITY JOURNAL; RARA GENE; RARG GENE; RUNX1 GENE; RXRA GENE; SRF GENE; TFEC GENE; TMPRSS2 GENE; TRIM7 GENE; UPREGULATION;

CHROMATIN IMMUNOPRECIPITATION; GENE EXPRESSION PROFILING; SOFTWARE; TRANSCRIPTOME;

EID: 84888374584     PISSN: 17542189     EISSN: 17502799     Source Type: Journal    
DOI: 10.1038/nprot.2013.150     Document Type: Article

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