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Volumn 95, Issue 3, 2013, Pages

Molecular evolution of porcine reproductive and respiratory syndrome virus isolates from central China

Author keywords

Genetic variation; ORF5; Phylogenetic analysis; PRRSV

Indexed keywords

AMINO ACID ANALYSIS; AMINO ACID SUBSTITUTION; AMINO TERMINAL SEQUENCE; ANIMAL TISSUE; ARTERIVIRUS; ARTICLE; CHINA; CONTROLLED STUDY; GENE SEQUENCE; GENETIC RECOMBINATION; GENETIC VARIABILITY; GENOTYPE; IMMUNE RESPONSE; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; VIRUS ISOLATION; VIRUS STRAIN;

EID: 84887988121     PISSN: 00345288     EISSN: 15322661     Source Type: Journal    
DOI: 10.1016/j.rvsc.2013.07.029     Document Type: Article
Times cited : (10)

References (42)
  • 2
    • 34250170123 scopus 로고    scopus 로고
    • Genetic diversity and phylogenetic analysis of glycoprotein 5 of PRRSV isolates in mainland China from 1996 to 2006: coexistence of two NA-subgenotypes with great diversity
    • An T.Q., Zhou Y.J., Liu G.Q., Tian Z.J., Li J., Qiu H.J., Tong G.Z. Genetic diversity and phylogenetic analysis of glycoprotein 5 of PRRSV isolates in mainland China from 1996 to 2006: coexistence of two NA-subgenotypes with great diversity. Veterinary Microbiology 2007, 123:43-52.
    • (2007) Veterinary Microbiology , vol.123 , pp. 43-52
    • An, T.Q.1    Zhou, Y.J.2    Liu, G.Q.3    Tian, Z.J.4    Li, J.5    Qiu, H.J.6    Tong, G.Z.7
  • 3
    • 0031011925 scopus 로고    scopus 로고
    • Genetic variation and phylogenetic relationships of 22 porcine reproductive and respiratory syndrome virus (PRRSV) field strains based on sequence analysis of open reading frame 5
    • Andreyev V.G., Wesley R.D., Mengeling W.L., Vorwald A.C., Lager K.M. Genetic variation and phylogenetic relationships of 22 porcine reproductive and respiratory syndrome virus (PRRSV) field strains based on sequence analysis of open reading frame 5. Archives of Virology 1997, 142:993-1001.
    • (1997) Archives of Virology , vol.142 , pp. 993-1001
    • Andreyev, V.G.1    Wesley, R.D.2    Mengeling, W.L.3    Vorwald, A.C.4    Lager, K.M.5
  • 4
    • 33645776979 scopus 로고    scopus 로고
    • Influence of N-linked glycosylation of porcine reproductive and respiratory syndrome virus GP5 on virus infectivity, antigenicity, and ability to induce neutralizing antibodies
    • Ansari I.H., Kwon B., Osorio F.A., Pattnaik A.K. Influence of N-linked glycosylation of porcine reproductive and respiratory syndrome virus GP5 on virus infectivity, antigenicity, and ability to induce neutralizing antibodies. Journal of Virology 2006, 80:3994-4004.
    • (2006) Journal of Virology , vol.80 , pp. 3994-4004
    • Ansari, I.H.1    Kwon, B.2    Osorio, F.A.3    Pattnaik, A.K.4
  • 5
    • 0036374953 scopus 로고    scopus 로고
    • Functional properties of the predicted helicase of porcine reproductive and respiratory syndrome virus
    • Bautista E.M., Faaberg K.S., Mickelson D., McGruder E.D. Functional properties of the predicted helicase of porcine reproductive and respiratory syndrome virus. Virology 2002, 298:258-270.
    • (2002) Virology , vol.298 , pp. 258-270
    • Bautista, E.M.1    Faaberg, K.S.2    Mickelson, D.3    McGruder, E.D.4
  • 6
    • 2942564430 scopus 로고    scopus 로고
    • Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence
    • Blom N., Sicheritz-Ponten T., Gupta R., Gammeltoft S., Brunak S. Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence. Proteomics 2004, 4:1633-1649.
    • (2004) Proteomics , vol.4 , pp. 1633-1649
    • Blom, N.1    Sicheritz-Ponten, T.2    Gupta, R.3    Gammeltoft, S.4    Brunak, S.5
  • 7
    • 33845659092 scopus 로고    scopus 로고
    • Genetic variation of Chinese PRRSV strains based on ORF5 sequence
    • Chen J., Liu T., Zhu C.G., Jin Y.F., Zhang Y.Z. Genetic variation of Chinese PRRSV strains based on ORF5 sequence. Biochemical Genetics 2006, 44:425-435.
    • (2006) Biochemical Genetics , vol.44 , pp. 425-435
    • Chen, J.1    Liu, T.2    Zhu, C.G.3    Jin, Y.F.4    Zhang, Y.Z.5
  • 8
    • 84860359782 scopus 로고    scopus 로고
    • Porcine reproductive and respiratory syndrome virus diversity of Eastern Canada swine herds in a large sequence dataset reveals two hypervariable regions under positive selection
    • Delisle B., Gagnon C.A., Lambert M.E., D'Allaire S. Porcine reproductive and respiratory syndrome virus diversity of Eastern Canada swine herds in a large sequence dataset reveals two hypervariable regions under positive selection. Infection, Genetics and Evolution 2012, 12:1111-1119.
    • (2012) Infection, Genetics and Evolution , vol.12 , pp. 1111-1119
    • Delisle, B.1    Gagnon, C.A.2    Lambert, M.E.3    D'Allaire, S.4
  • 9
    • 33745875648 scopus 로고    scopus 로고
    • Neutralizing antibody responses of pigs infected with natural GP5 N-glycan mutants of porcine reproductive and respiratory syndrome virus
    • Faaberg K.S., Hocker J.D., Erdman M.M., Harris D.L., Nelson E.A., Torremorell M., Plagemann P.G. Neutralizing antibody responses of pigs infected with natural GP5 N-glycan mutants of porcine reproductive and respiratory syndrome virus. Viral Immunology 2006, 19:294-304.
    • (2006) Viral Immunology , vol.19 , pp. 294-304
    • Faaberg, K.S.1    Hocker, J.D.2    Erdman, M.M.3    Harris, D.L.4    Nelson, E.A.5    Torremorell, M.6    Plagemann, P.G.7
  • 10
    • 0036042217 scopus 로고    scopus 로고
    • The genetic diversity of European type PRRSV is similar to that of the North American type but is geographically skewed within Europe
    • Forsberg R., Storgaard T., Nielsen H.S., Oleksiewicz M.B., Cordioli P., Sala G., Hein J., Botner A. The genetic diversity of European type PRRSV is similar to that of the North American type but is geographically skewed within Europe. Virology 2002, 299:38-47.
    • (2002) Virology , vol.299 , pp. 38-47
    • Forsberg, R.1    Storgaard, T.2    Nielsen, H.S.3    Oleksiewicz, M.B.4    Cordioli, P.5    Sala, G.6    Hein, J.7    Botner, A.8
  • 11
    • 62149108264 scopus 로고    scopus 로고
    • Porcine reproductive and respiratory syndrome viruses predominant in southeastern China from 2004 to 2007 were from a common source and underwent further divergence
    • Hu H., Li X., Zhang Z., Shuai J., Chen N., Liu G., Fang W. Porcine reproductive and respiratory syndrome viruses predominant in southeastern China from 2004 to 2007 were from a common source and underwent further divergence. Archives of Virology 2009, 154:391-398.
    • (2009) Archives of Virology , vol.154 , pp. 391-398
    • Hu, H.1    Li, X.2    Zhang, Z.3    Shuai, J.4    Chen, N.5    Liu, G.6    Fang, W.7
  • 12
    • 0029948770 scopus 로고    scopus 로고
    • Genetic variation in porcine reproductive and respiratory syndrome virus isolates in the midwestern United States
    • Kapur V., Elam M.R., Pawlovich T.M., Murtaugh M.P. Genetic variation in porcine reproductive and respiratory syndrome virus isolates in the midwestern United States. The Journal of General Virology 1996, 77(Pt 6):1271-1276.
    • (1996) The Journal of General Virology , vol.77 , Issue.PART 6 , pp. 1271-1276
    • Kapur, V.1    Elam, M.R.2    Pawlovich, T.M.3    Murtaugh, M.P.4
  • 13
    • 0035955888 scopus 로고    scopus 로고
    • Genetic variation and phylogenetic analyses of the ORF5 gene of acute porcine reproductive and respiratory syndrome virus isolates
    • Key K.F., Haqshenas G., Guenette D.K., Swenson S.L., Toth T.E., Meng X.J. Genetic variation and phylogenetic analyses of the ORF5 gene of acute porcine reproductive and respiratory syndrome virus isolates. Veterinary Microbiology 2001, 83:249-263.
    • (2001) Veterinary Microbiology , vol.83 , pp. 249-263
    • Key, K.F.1    Haqshenas, G.2    Guenette, D.K.3    Swenson, S.L.4    Toth, T.E.5    Meng, X.J.6
  • 14
    • 17744396121 scopus 로고    scopus 로고
    • Not so different after all: a comparison of methods for detecting amino acid sites under selection
    • Kosakovsky Pond S.L., Frost S.D. Not so different after all: a comparison of methods for detecting amino acid sites under selection. Molecular Biology and Evolution 2005, 22:1208-1222.
    • (2005) Molecular Biology and Evolution , vol.22 , pp. 1208-1222
    • Kosakovsky Pond, S.L.1    Frost, S.D.2
  • 15
    • 80052198681 scopus 로고    scopus 로고
    • Epidemiology and evolutionary characteristics of the porcine reproductive and respiratory syndrome virus in China between 2006 and 2010
    • Li B., Fang L., Guo X., Gao J., Song T., Bi J., He K., Chen H., Xiao S. Epidemiology and evolutionary characteristics of the porcine reproductive and respiratory syndrome virus in China between 2006 and 2010. Journal of Clinical Microbiology 2011, 49:3175-3183.
    • (2011) Journal of Clinical Microbiology , vol.49 , pp. 3175-3183
    • Li, B.1    Fang, L.2    Guo, X.3    Gao, J.4    Song, T.5    Bi, J.6    He, K.7    Chen, H.8    Xiao, S.9
  • 16
    • 61349166443 scopus 로고    scopus 로고
    • Immunogenicity of the highly pathogenic porcine reproductive and respiratory syndrome virus GP5 protein encoded by a synthetic ORF5 gene
    • Li B., Xiao S., Wang Y., Xu S., Jiang Y., Chen H., Fang L. Immunogenicity of the highly pathogenic porcine reproductive and respiratory syndrome virus GP5 protein encoded by a synthetic ORF5 gene. Vaccine 2009, 27:1957-1963.
    • (2009) Vaccine , vol.27 , pp. 1957-1963
    • Li, B.1    Xiao, S.2    Wang, Y.3    Xu, S.4    Jiang, Y.5    Chen, H.6    Fang, L.7
  • 17
    • 67349220122 scopus 로고    scopus 로고
    • Genetic variation analysis of porcine reproductive and respiratory syndrome virus isolated in China from 2002 to 2007 based on ORF5
    • Li Y., Wang X., Jiang P., Chen W., Wang K. Genetic variation analysis of porcine reproductive and respiratory syndrome virus isolated in China from 2002 to 2007 based on ORF5. Veterinary Microbiology 2009, 138:150-155.
    • (2009) Veterinary Microbiology , vol.138 , pp. 150-155
    • Li, Y.1    Wang, X.2    Jiang, P.3    Chen, W.4    Wang, K.5
  • 18
    • 67349220122 scopus 로고    scopus 로고
    • Genetic variation analysis of porcine reproductive and respiratory syndrome virus isolated in China from 2002 to 2007 based on ORF5
    • Li Y., Wang X., Jiang P., Chen W., Wang K. Genetic variation analysis of porcine reproductive and respiratory syndrome virus isolated in China from 2002 to 2007 based on ORF5. Veterinary Microbiology 2009, 138:150-155.
    • (2009) Veterinary Microbiology , vol.138 , pp. 150-155
    • Li, Y.1    Wang, X.2    Jiang, P.3    Chen, W.4    Wang, K.5
  • 21
    • 0033824415 scopus 로고    scopus 로고
    • RDP: detection of recombination amongst aligned sequences
    • Martin D., Rybicki E. RDP: detection of recombination amongst aligned sequences. Bioinformatics 2000, 16:562-563.
    • (2000) Bioinformatics , vol.16 , pp. 562-563
    • Martin, D.1    Rybicki, E.2
  • 22
    • 0034640755 scopus 로고    scopus 로고
    • Heterogeneity of porcine reproductive and respiratory syndrome virus: implications for current vaccine efficacy and future vaccine development
    • Meng X.J. Heterogeneity of porcine reproductive and respiratory syndrome virus: implications for current vaccine efficacy and future vaccine development. Veterinary Microbiology 2000, 74:309-329.
    • (2000) Veterinary Microbiology , vol.74 , pp. 309-329
    • Meng, X.J.1
  • 24
    • 0032889516 scopus 로고    scopus 로고
    • Porcine reproductive and respiratory syndrome virus comparison: divergent evolution on two continents
    • Nelsen C.J., Murtaugh M.P., Faaberg K.S. Porcine reproductive and respiratory syndrome virus comparison: divergent evolution on two continents. Journal of Virology 1999, 73:270-280.
    • (1999) Journal of Virology , vol.73 , pp. 270-280
    • Nelsen, C.J.1    Murtaugh, M.P.2    Faaberg, K.S.3
  • 25
    • 0036223761 scopus 로고    scopus 로고
    • Identification of neutralizing and nonneutralizing epitopes in the porcine reproductive and respiratory syndrome virus GP5 ectodomain
    • Ostrowski M., Galeota J.A., Jar A.M., Platt K.B., Osorio F.A., Lopez O.J. Identification of neutralizing and nonneutralizing epitopes in the porcine reproductive and respiratory syndrome virus GP5 ectodomain. Journal of Virology 2002, 76:4241-4250.
    • (2002) Journal of Virology , vol.76 , pp. 4241-4250
    • Ostrowski, M.1    Galeota, J.A.2    Jar, A.M.3    Platt, K.B.4    Osorio, F.A.5    Lopez, O.J.6
  • 26
    • 7044274060 scopus 로고    scopus 로고
    • The primary GP5 neutralization epitope of North American isolates of porcine reproductive and respiratory syndrome virus
    • Plagemann P.G. The primary GP5 neutralization epitope of North American isolates of porcine reproductive and respiratory syndrome virus. Veterinary Immunology and Immunopathology 2004, 102:263-275.
    • (2004) Veterinary Immunology and Immunopathology , vol.102 , pp. 263-275
    • Plagemann, P.G.1
  • 27
    • 17744395033 scopus 로고    scopus 로고
    • Datamonkey: rapid detection of selective pressure on individual sites of codon alignments
    • Pond S.L., Frost S.D. Datamonkey: rapid detection of selective pressure on individual sites of codon alignments. Bioinformatics 2005, 21:2531-2533.
    • (2005) Bioinformatics , vol.21 , pp. 2531-2533
    • Pond, S.L.1    Frost, S.D.2
  • 28
    • 84860181091 scopus 로고    scopus 로고
    • Evolution of viral genomes: interplay between selection, recombination, and other forces
    • Pond S.L., Murrell B., Poon A.F. Evolution of viral genomes: interplay between selection, recombination, and other forces. Methods in Molecular Biology 2012, 856:239-272.
    • (2012) Methods in Molecular Biology , vol.856 , pp. 239-272
    • Pond, S.L.1    Murrell, B.2    Poon, A.F.3
  • 30
    • 0036324050 scopus 로고    scopus 로고
    • Identification of radically different variants of porcine reproductive and respiratory syndrome virus in Eastern Europe: towards a common ancestor for European and American viruses
    • Stadejek T., Stankevicius A., Storgaard T., Oleksiewicz M.B., Belak S., Drew T.W., Pejsak Z. Identification of radically different variants of porcine reproductive and respiratory syndrome virus in Eastern Europe: towards a common ancestor for European and American viruses. The Journal of General Virology 2002, 83:1861-1873.
    • (2002) The Journal of General Virology , vol.83 , pp. 1861-1873
    • Stadejek, T.1    Stankevicius, A.2    Storgaard, T.3    Oleksiewicz, M.B.4    Belak, S.5    Drew, T.W.6    Pejsak, Z.7
  • 31
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Molecular Biology and Evolution 2007, 24:1596-1599.
    • (2007) Molecular Biology and Evolution , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 32
    • 48649108828 scopus 로고    scopus 로고
    • Identification of immunodominant T-cell epitopes present in glycoprotein 5 of the North American genotype of porcine reproductive and respiratory syndrome virus
    • Vashisht K., Goldberg T.L., Husmann R.J., Schnitzlein W., Zuckermann F.A. Identification of immunodominant T-cell epitopes present in glycoprotein 5 of the North American genotype of porcine reproductive and respiratory syndrome virus. Vaccine 2008, 26:4747-4753.
    • (2008) Vaccine , vol.26 , pp. 4747-4753
    • Vashisht, K.1    Goldberg, T.L.2    Husmann, R.J.3    Schnitzlein, W.4    Zuckermann, F.A.5
  • 33
    • 79956096989 scopus 로고    scopus 로고
    • Immune evasion of porcine reproductive and respiratory syndrome virus through glycan shielding involves both glycoprotein 5 as well as glycoprotein 3
    • Vu H.L., Kwon B., Yoon K.J., Laegreid W.W., Pattnaik A.K., Osorio F.A. Immune evasion of porcine reproductive and respiratory syndrome virus through glycan shielding involves both glycoprotein 5 as well as glycoprotein 3. Journal of Virology 2011, 85:5555-5564.
    • (2011) Journal of Virology , vol.85 , pp. 5555-5564
    • Vu, H.L.1    Kwon, B.2    Yoon, K.J.3    Laegreid, W.W.4    Pattnaik, A.K.5    Osorio, F.A.6
  • 34
    • 25144476250 scopus 로고    scopus 로고
    • Envelope protein requirements for the assembly of infectious virions of porcine reproductive and respiratory syndrome virus
    • Wissink E.H., Kroese M.V., van Wijk H.A., Rijsewijk F.A., Meulenberg J.J., Rottier P.J. Envelope protein requirements for the assembly of infectious virions of porcine reproductive and respiratory syndrome virus. Journal of Virology 2005, 79:12495-12506.
    • (2005) Journal of Virology , vol.79 , pp. 12495-12506
    • Wissink, E.H.1    Kroese, M.V.2    van Wijk, H.A.3    Rijsewijk, F.A.4    Meulenberg, J.J.5    Rottier, P.J.6
  • 35
    • 0034520364 scopus 로고    scopus 로고
    • Full-length sequence of a Canadian porcine reproductive and respiratory syndrome virus (PRRSV) isolate
    • Wootton S., Yoo D., Rogan D. Full-length sequence of a Canadian porcine reproductive and respiratory syndrome virus (PRRSV) isolate. Archives of Virology 2000, 145:2297-2323.
    • (2000) Archives of Virology , vol.145 , pp. 2297-2323
    • Wootton, S.1    Yoo, D.2    Rogan, D.3
  • 36
    • 0037383418 scopus 로고    scopus 로고
    • Homo-oligomerization of the porcine reproductive and respiratory syndrome virus nucleocapsid protein and the role of disulfide linkages
    • Wootton S.K., Yoo D. Homo-oligomerization of the porcine reproductive and respiratory syndrome virus nucleocapsid protein and the role of disulfide linkages. Journal of Virology 2003, 77:4546-4557.
    • (2003) Journal of Virology , vol.77 , pp. 4546-4557
    • Wootton, S.K.1    Yoo, D.2
  • 39
    • 79955947238 scopus 로고    scopus 로고
    • Evidence for the adaptive evolution of ORF5 gene of Porcine reproductive and respiratory syndrome virus isolated in China
    • Xu Z., Chang X., Xiao S., Chen H., Zhou R. Evidence for the adaptive evolution of ORF5 gene of Porcine reproductive and respiratory syndrome virus isolated in China. Acta Virologica 2010, 54:281-285.
    • (2010) Acta Virologica , vol.54 , pp. 281-285
    • Xu, Z.1    Chang, X.2    Xiao, S.3    Chen, H.4    Zhou, R.5
  • 40
    • 84863351057 scopus 로고    scopus 로고
    • Genetic diversity of the ORF5 gene of porcine reproductive and respiratory syndrome virus isolates in southwest China from 2007 to 2009
    • Yin G., Gao L., Shu X., Yang G., Guo S., Li W. Genetic diversity of the ORF5 gene of porcine reproductive and respiratory syndrome virus isolates in southwest China from 2007 to 2009. PLoS One 2012, 7:e33756.
    • (2012) PLoS One , vol.7
    • Yin, G.1    Gao, L.2    Shu, X.3    Yang, G.4    Guo, S.5    Li, W.6
  • 41
    • 84869095601 scopus 로고    scopus 로고
    • Ligation of Fc gamma receptor IIB enhances levels of antiviral cytokine in response to PRRSV infection in vitro
    • Zhang Y., Zhou Y., Yang Q., Mu C., Duan E., Chen J., Yang M., Xia P., Cui B. Ligation of Fc gamma receptor IIB enhances levels of antiviral cytokine in response to PRRSV infection in vitro. Veterinary Microbiology 2012, 160:473-480.
    • (2012) Veterinary Microbiology , vol.160 , pp. 473-480
    • Zhang, Y.1    Zhou, Y.2    Yang, Q.3    Mu, C.4    Duan, E.5    Chen, J.6    Yang, M.7    Xia, P.8    Cui, B.9


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