Genetic variation in porcine reproductive and respiratory syndrome virus isolates in the midwestern United States

Journal of General Virology

Volumn 77, Issue 6, 1996, Pages 1271-1276

  Kapur, V ^a   Elam, M R ^a   Pawlovich, T M ^a   Murtaugh, M P ^a  

^a UNIVERSITY OF MINNESOTA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS ENVELOPE PROTEIN; VIRUS GLYCOPROTEIN;

AMINO ACID SEQUENCE; ARTICLE; EVOLUTION; GENE CONVERSION; GENETIC CONSERVATION; GENETIC DISTANCE; GENETIC POLYMORPHISM; GENETIC RECOMBINATION; GENETIC VARIABILITY; NONHUMAN; NUCLEIC ACID BASE SUBSTITUTION; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; RNA VIRUS; UNITED STATES; VIRUS ISOLATION; VIRUS TYPING;

PORCINE REPRODUCTIVE AND RESPIRATORY SYNDROME VIRUS; RNA VIRUSES; SUIDAE;

EID: 0029948770     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/0022-1317-77-6-1271     Document Type: Article

References (27)

1. BENTIELD, D. A, NELSON, E., COLLINS, J. E., HARRIS, L., GOYAL, S. M., ROBISON. D., CHRISTIANSON, W. T., MORRISON, R. B., GORCYCA, D. E. & CHLADEK, D.W. (1992). Characterization of swine infertility and respiratory syndrome (SIRS) virus (isolate ATCC VR-2332). Journal of Veterinary Diagnostie Investigation 4, 127-133.
2. BANNER, L. R. & LAI. M. M. (1991). Random nature of coronavirus RNA recombination in the absence of selection pressure. Virology 185, 441-445.
3. BAUTISTA, E. M., GOYAL, S. G., YOON, I. J., Joo, H. S. & COLLINS, J. E (1993). Comparison of porcine aveolar macrophages and CL 2621 for the detection of porcine reproductive and respiratory syndrome (PRRS) virus and anti-PRRS antibody. Journal of Veterinary Diagnostic Investigation 5, 163-165.
4. CHOMCZYNSKI, P. & SACCHI, N (1987). Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Analytical Biochemistry 162, 156-159.
5. COLLINS, J. E., BENFIELD, D. A., CHRISTIANSON, W. T., HARRIS, L., HENNINGS, J. C, SHAW, D. P., GOYAL, S. M., McCULLOUGH. S., MORRISON. R B., Joo. H. S., GORCYCA, D. E. & CHLADEK. D. W. (1992). Isolation of swine infertility and respiratory syndrome virus (isolate ATCC VR-2332) in North America and experimental reproduction of the disease in gnotobiotic pigs. Journal of Veterinary Diagnostic Investigation 4, 117-126
6. DEN BOON, J. A., SNIJDER, E, J., CHIRNSIDE, E. D., DE VRIES, A. A. F., HORZINEK, M. C. & SPAAN, W. J. M. (1991). Equine arteritis virus is not a togavirus but belongs to the coronavirus superfamily. Journal of Virology 65, 2910-2920.
7. DE VRIES, A. A. F , CHIRNSIDE. E. D., HORZINEK, M. C. & ROTTIER, P. J. M. (1992). Structural proteins of equine arteritis virus. Journal of Virology 66, 6294-6303.
8. FELSENSTEIN, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
9. GODENY, E. K., SPEICHER. D. W. & BRINTON, M. A. (1990). Map location of lactate dehydrogenase-elevating virus (LDV) capsid protein (VP1) gene. Virology 177, 768-771
10. GODENY, E. K., ZENG, L., SMITH, S L. & BRINTON, M. A (1993). Simon hemorrhagic fever virus : another member of the coronaviruslike superfamily. In Proceedings of the 9th International Congress of Virology, p. 22, August 8-13. Glasgow, Scotland, UK.
11. HAYASHIDA, H., TOH, H., KIKUNO, R., MIYATA, T. (1985). Evolution of influenza virus genes. Molecular Biology and Evolution 2, 289-303.
12. HILL, H. (1990). Overview and history of mystery swine disease (swine infertility and respiratory syndrome). In Proceedings of the Mystery Swine Disease Committee Meeting, October 6, Denver Colorado, pp. 29-30. Madison, Wisconsin: Livestock Conservation Institute.
13. Li, W. H., Wu C. I. & Luo, C. C. (1985). A new method for estimating synonomous and nonsynonomous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes. Molecular Biology and Evolution 2, 150-174
14. MEULENBERG, J. J. M., HULST, M. M , DE MEIJER, E. J., MOONEN, P. L. J. M., DEN BESTEN, A., DE KLUYVER, E. P., WENSVOORT, G. & MOORMANN, R. J. M. (1993). Lelystad virus, the causative agent of porcine epidemic abortion and respiratory syndrome (PEARS), is related to LDV and EAV. Virology 192, 62-72.
15. MEULENBERG, J. J., PETERSEN-DEN-BESTEN, A., DE KLUYVER, E. P., MOORMAN, R. J., SCHAAPER, W. M. & WENSVOORT, G. (1995). Characterization of proteins encoded by ORFs 2 to 7 of Lelystad virus. Virology 206, 155-163.
16. MURTAUGH, M. P., ELAM, M. R. & KAKACH, L. T. (1995). Comparison of the structural protein coding sequences of the VR-2332 and Lelystad strains of the PRRS virus. Archives of Virology 140. 1451-1460.
17. NEI, M. (1987). Molecular Evolutionary Genetics. New York: Columbia University Press.
18. NEI, M. & GOJOBORI, T. (1986) Simple methods for estimating the numbers of synonymous and nonsynonymous substitutions. Molecular Biology and Evolution 3, 418-426.
19. PATON, D. J., BROWN. I. H., EDWARDS, S. & WENSVOORT. G. (1991). Blue ear disease of pigs. Veterinary Record 128, 617.
20. PLAGEMANN, P. G. W. & MOENNIG, V. ( 1992). Lactate dehydrogenaseelevating virus, equine artentis virus and simian hemorrhagic fever virus: a new group of positive-strand RNA viruses. Advances in Virus Research 41, 99-192.
21. POL, J M. A., VAN DIJK, J. E., WENSVOORT, G. & TERPSTRA, C. (1991). Pathological, ultrastructural, and immunohistochermcal changes caused by Lelystad virus in experimentally induced infections of mystery swine disease (synonym: porcine epidemic abortion and respiratory syndrome (PEARS)). Veterinary Quarterly 13, 137-143.
22. SPAAN, W. J. M., Cavanagh, D. & Horzinek. M. C. (1988). Coronaviruses: structure and genome expression. Journal of General Virology 69, 2939-2952.
23. SAWYER, S. (1989). Statistical tests for detecting gene conversion Molecular Biology and Evolution 6. 526-538.
24. SWOFFORD, D L. (1991). PAUP 3.1.1: phylogenetic analysis using parsimony. Illinois Natural History Survey. Champaign, Illinois: University of Illinois
25. WENSVOORT. G., TERPSTRA C., POL, J M. A., TER LAAK. E. A., BLOEMRAAD. M., DE KLUYVER. E P., KRAGTEN C.. VAN BUITES, L., DEN BESTEN, A., WAGENAAR, F., BROEKHUIJSEN, J. M., MOONEN. P. L. J. M., ZETSTRA. T., DE BOER. E. A . TIBBEN, H. J . DE JONG, M. F., VAN'T VELD. P., GROENLAND. G. J. R., VAN GENSEP, J. A., VOETS, M. T., VERHEUIJEN, J. H. M. & BRAAMSKAMP, J. (1991). Mystery swine disease in the Netherlands : the isolation of Lelystad virus. Veterinary Quarterly 13, 121-130.
26. WENSVOORT, G., DE KLUYVER, E. P., POL, J. M. A., WAGENAAR, F., MOORMANN, R. J. M., HULST, M. M., BLOEMRAAD, R., DEN BESTEN, A., ZETSTRA, T. & TERPSTRA C. (1992a). Lelystad virus, the cause of porcine epidemic abortion and respiratory syndrome: a review of mystery swine disease research at Lelystad. Veterinary Microbiology 33, 185-193.
27. WENSVOORT, G., DE KLUYVER, E. P., LUIJTZE, E. A., DEN BESTEN, A., HARRIS, L., COLLINS, J. E., CHRISTIANSON, W. T. & CHLADEK, D. (1992b). Antigenic comparison of Lelystad virus and swine infertility and respiratory syndrome (SIRS) virus. Journal of Veterinary Diagnostic Investigation 4, 134-138.