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Volumn 32, Issue 22, 2013, Pages 2963-2979

A small RNA activates CFA synthase by isoform-specific mRNA stabilization

Author keywords

Fatty acid synthesis; Hfq; mRNA activation; noncoding RNA; small RNA

Indexed keywords

BACTERIAL RNA; CYCLOPROPANE FATTY ACID SYNTHETASE; FATTY ACID SYNTHASE; GENOMIC DNA; MESSENGER RNA; RIBONUCLEASE E; RNA ISOFORM; RNA RYDC; UNCLASSIFIED DRUG;

EID: 84887826391     PISSN: 02614189     EISSN: 14602075     Source Type: Journal    
DOI: 10.1038/emboj.2013.222     Document Type: Article
Times cited : (96)

References (80)
  • 1
    • 15044340366 scopus 로고    scopus 로고
    • Both RNase e and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB
    • Afonyushkin T, Vecerek B, Moll I, Blasi U, Kaberdin VR (2005) Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB. Nucleic Acids Res 33: 1678-1689
    • (2005) Nucleic Acids Res , vol.33 , pp. 1678-1689
    • Afonyushkin, T.1    Vecerek, B.2    Moll, I.3    Blasi, U.4    Kaberdin, V.R.5
  • 2
    • 14844284580 scopus 로고    scopus 로고
    • A small bacterial RNA regulates a putative ABC transporter
    • Antal M, Bordeau V, Douchin V, Felden B (2005) A small bacterial RNA regulates a putative ABC transporter. J Biol Chem 280: 7901-7908
    • (2005) J Biol Chem , vol.280 , pp. 7901-7908
    • Antal, M.1    Bordeau, V.2    Douchin, V.3    Felden, B.4
  • 4
    • 0031951386 scopus 로고    scopus 로고
    • MRNA stabilization by the ompA 50 untranslated region: Two protective elements hinder distinct pathways for mRNA degradation
    • Arnold TE, Yu J, Belasco JG (1998) mRNA stabilization by the ompA 50 untranslated region: Two protective elements hinder distinct pathways for mRNA degradation. RNA 4: 319-330
    • (1998) RNA , vol.4 , pp. 319-330
    • Arnold, T.E.1    Yu, J.2    Belasco, J.G.3
  • 5
    • 84866788439 scopus 로고    scopus 로고
    • The seed region of a small RNA drives the controlled destruction of the target mRNA by the endoribonuclease RNase e
    • Bandyra KJ, Said N, Pfeiffer V, Gorna MW, Vogel J, Luisi BF (2012) The seed region of a small RNA drives the controlled destruction of the target mRNA by the endoribonuclease RNase E. Mol Cell 47: 943-953
    • (2012) Mol Cell , vol.47 , pp. 943-953
    • Bandyra, K.J.1    Said, N.2    Pfeiffer, V.3    Gorna, M.W.4    Vogel, J.5    Luisi, B.F.6
  • 6
    • 77953884287 scopus 로고    scopus 로고
    • All things must pass: Contrasts and commonalities in eukaryotic and bacterial mRNA decay
    • Belasco JG (2010) All things must pass: Contrasts and commonalities in eukaryotic and bacterial mRNA decay. Nat Rev Mol Cell Biol 11: 467-478
    • (2010) Nat Rev Mol Cell Biol , vol.11 , pp. 467-478
    • Belasco, J.G.1
  • 7
    • 0029845782 scopus 로고    scopus 로고
    • Sensitive detection of bacterial transcription initiation sites and differentiation from RNA processing sites in the pheromone-Induced plasmid transfer system of Enterococcus faecalis
    • Bensing BA, Meyer BJ, Dunny GM (1996) Sensitive detection of bacterial transcription initiation sites and differentiation from RNA processing sites in the pheromone-Induced plasmid transfer system of Enterococcus faecalis. Proc Natl Acad Sci USA 93: 7794-7799
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 7794-7799
    • Bensing, B.A.1    Meyer, B.J.2    Dunny, G.M.3
  • 8
    • 0026492668 scopus 로고
    • Control of RNase E-Mediated RNA degradation by 50-Terminal base pairing in E. Coli
    • Bouvet P, Belasco JG (1992) Control of RNase E-Mediated RNA degradation by 50-Terminal base pairing in E. Coli. Nature 360: 488-491
    • (1992) Nature , vol.360 , pp. 488-491
    • Bouvet, P.1    Belasco, J.G.2
  • 9
    • 57149111586 scopus 로고    scopus 로고
    • Small RNA binding to 50 mRNA coding region inhibits translational initiation
    • Bouvier M, Sharma CM, Mika F, Nierhaus KH, Vogel J (2008) Small RNA binding to 50 mRNA coding region inhibits translational initiation. Mol Cell 32: 827-837
    • (2008) Mol Cell , vol.32 , pp. 827-837
    • Bouvier, M.1    Sharma, C.M.2    Mika, F.3    Nierhaus, K.H.4    Vogel, J.5
  • 10
    • 0032541436 scopus 로고    scopus 로고
    • Ribosomes inhibit an RNase e cleavage which induces the decay of the rpsO mRNA of Escherichia coli
    • Braun F, Le Derout J, Regnier P (1998) Ribosomes inhibit an RNase E cleavage which induces the decay of the rpsO mRNA of Escherichia coli. EMBO J 17: 4790-4797
    • (1998) EMBO J , vol.17 , pp. 4790-4797
    • Braun, F.1    Le Derout, J.2    Regnier, P.3
  • 11
    • 34447538279 scopus 로고    scopus 로고
    • Viral RNA pseudoknots: Versatile motifs in gene expression and replication
    • Brierley I, Pennell S, Gilbert RJ (2007) Viral RNA pseudoknots: Versatile motifs in gene expression and replication. Nat Rev Microbiol 5: 598-610
    • (2007) Nat Rev Microbiol , vol.5 , pp. 598-610
    • Brierley, I.1    Pennell, S.2    Gilbert, R.J.3
  • 13
    • 0033054689 scopus 로고    scopus 로고
    • Membrane cyclopropane fatty acid content is a major factor in acid resistance of Escherichia coli
    • Chang Jr YY, Cronan JE (1999) Membrane cyclopropane fatty acid content is a major factor in acid resistance of Escherichia coli. Mol Microbiol 33: 249-259
    • (1999) Mol Microbiol , vol.33 , pp. 249-259
    • Chang Jr., Y.Y.1    Cronan, J.E.2
  • 14
    • 84867577054 scopus 로고    scopus 로고
    • An atlas of Hfq-Bound transcripts reveals 30 UTRs as a genomic reservoir of regulatory small RNAs
    • Chao Y, Papenfort K, Reinhardt R, Sharma CM, Vogel J (2012) An atlas of Hfq-Bound transcripts reveals 30 UTRs as a genomic reservoir of regulatory small RNAs. EMBO J 31: 4005-4019
    • (2012) EMBO J , vol.31 , pp. 4005-4019
    • Chao, Y.1    Papenfort, K.2    Reinhardt, R.3    Sharma, C.M.4    Vogel, J.5
  • 16
    • 0024297354 scopus 로고
    • Multiple sequence alignment with hierarchical clustering
    • Corpet F (1988) Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res 16: 10881-10890
    • (1988) Nucleic Acids Res , vol.16 , pp. 10881-10890
    • Corpet, F.1
  • 17
    • 0036214643 scopus 로고    scopus 로고
    • Phospholipid modifications in bacteria
    • Cronan Jr JE (2002) Phospholipid modifications in bacteria. Curr Opin Microbiol 5: 202-205
    • (2002) Curr Opin Microbiol , vol.5 , pp. 202-205
    • Cronan Jr., J.E.1
  • 18
    • 0034612342 scopus 로고    scopus 로고
    • One-Step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko KA, Wanner BL (2000) One-Step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97: 6640-6645
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 19
    • 84875457350 scopus 로고    scopus 로고
    • Bacterial small RNA-Based negative regulation: Hfq and its accomplices
    • De Lay N, Schu DJ, Gottesman S (2013) Bacterial small RNA-Based negative regulation: Hfq and its accomplices. J Biol Chem 288: 7996-8003
    • (2013) J Biol Chem , vol.288 , pp. 7996-8003
    • De Lay, N.1    Schu, D.J.2    Gottesman, S.3
  • 20
    • 84859365433 scopus 로고    scopus 로고
    • Noncanonical repression of translation initiation through small RNA recruitment of the RNA chaperone Hfq
    • Desnoyers G, Masse E (2012) Noncanonical repression of translation initiation through small RNA recruitment of the RNA chaperone Hfq. Genes Dev 26: 726-739
    • (2012) Genes Dev , vol.26 , pp. 726-739
    • Desnoyers, G.1    Masse, E.2
  • 21
    • 67349095027 scopus 로고    scopus 로고
    • Small RNAinduced differential degradation of the polycistronic mRNA iscRSUA
    • Desnoyers G, Morissette A, Prevost K, Masse E (2009) Small RNAinduced differential degradation of the polycistronic mRNA iscRSUA. EMBO J 28: 1551-1561
    • (2009) EMBO J , vol.28 , pp. 1551-1561
    • Desnoyers, G.1    Morissette, A.2    Prevost, K.3    Masse, E.4
  • 22
    • 69749123311 scopus 로고    scopus 로고
    • Caught at its own game: Regulatory small RNA inactivated by an inducible transcript mimicking its target
    • Figueroa-Bossi N, Valentini M, Malleret L, Fiorini F, Bossi L (2009) Caught at its own game: Regulatory small RNA inactivated by an inducible transcript mimicking its target. Genes Dev 23: 2004-2015
    • (2009) Genes Dev , vol.23 , pp. 2004-2015
    • Figueroa-Bossi, N.1    Valentini, M.2    Malleret, L.3    Fiorini, F.4    Bossi, L.5
  • 23
    • 84887820128 scopus 로고    scopus 로고
    • Assigning functions to Hfq-Dependent small RNAs in the model pathogen salmonella typhimurium
    • Julius-Maximilians-University Ẅrzburg, Ẅrzburg
    • Fröhlich KS (2013) Assigning functions to Hfq-Dependent small RNAs in the model pathogen Salmonella Typhimurium. Doctoral Thesis. Julius-Maximilians-University Ẅrzburg, Ẅrzburg
    • (2013) Doctoral Thesis
    • Fröhlich, K.S.1
  • 24
    • 84858860817 scopus 로고    scopus 로고
    • A conserved RpoS-Dependent small RNA controls the synthesis of major porin OmpD
    • Fröhlich KS, Papenfort K, Berger AA, Vogel J (2012) A conserved RpoS-Dependent small RNA controls the synthesis of major porin OmpD. Nucleic Acids Res 40: 3623-3640
    • (2012) Nucleic Acids Res , vol.40 , pp. 3623-3640
    • Fröhlich, K.S.1    Papenfort, K.2    Berger, A.A.3    Vogel, J.4
  • 25
    • 71549126189 scopus 로고    scopus 로고
    • Activation of gene expression by small RNA
    • Fröhlich KS, Vogel J (2009) Activation of gene expression by small RNA. Curr Opin Microbiol 12: 674-682
    • (2009) Curr Opin Microbiol , vol.12 , pp. 674-682
    • Fröhlich, K.S.1    Vogel, J.2
  • 26
    • 0021271149 scopus 로고
    • Cloning and manipulation of the Escherichia coli cyclopropane fatty acid synthase gene: Physiological aspects of enzyme overproduction
    • Grogan DW, Cronan Jr JE (1984) Cloning and manipulation of the Escherichia coli cyclopropane fatty acid synthase gene: Physiological aspects of enzyme overproduction. J Bacteriol 158: 286-295
    • (1984) J Bacteriol , vol.158 , pp. 286-295
    • Grogan, D.W.1    Cronan Jr., J.E.2
  • 27
    • 0031457094 scopus 로고    scopus 로고
    • Cyclopropane ring formation in membrane lipids of bacteria
    • Grogan DW, Cronan Jr JE (1997) Cyclopropane ring formation in membrane lipids of bacteria. Microbiol Mol Biol Rev 61: 429-441
    • (1997) Microbiol Mol Biol Rev , vol.61 , pp. 429-441
    • Grogan, D.W.1    Cronan Jr., J.E.2
  • 28
    • 57149118846 scopus 로고    scopus 로고
    • The 50 end of two redundant sRNAs is involved in the regulation of multiple targets, including their own regulator
    • Guillier M, Gottesman S (2008) The 50 end of two redundant sRNAs is involved in the regulation of multiple targets, including their own regulator. Nucleic Acids Res 36: 6781-6794
    • (2008) Nucleic Acids Res , vol.36 , pp. 6781-6794
    • Guillier, M.1    Gottesman, S.2
  • 29
    • 84859996025 scopus 로고    scopus 로고
    • A mixed double negative feedback loop between the sRNA MicF and the global regulator Lrp
    • Holmqvist E, Unoson C, Reimegard J, Wagner EG (2012) A mixed double negative feedback loop between the sRNA MicF and the global regulator Lrp. Mol Microbiol 84: 414-427
    • (2012) Mol Microbiol , vol.84 , pp. 414-427
    • Holmqvist, E.1    Unoson, C.2    Reimegard, J.3    Wagner, E.G.4
  • 30
    • 78651067735 scopus 로고    scopus 로고
    • Hfq binding at RhlBrecognition region of RNase e is crucial for the rapid degradation of target mRNAs mediated by sRNAs in Escherichia coli
    • Ikeda Y, Yagi M, Morita T, Aiba H (2011) Hfq binding at RhlBrecognition region of RNase E is crucial for the rapid degradation of target mRNAs mediated by sRNAs in Escherichia coli. Mol Microbiol 79: 419-432
    • (2011) Mol Microbiol , vol.79 , pp. 419-432
    • Ikeda, Y.1    Yagi, M.2    Morita, T.3    Aiba, H.4
  • 32
    • 13444288319 scopus 로고    scopus 로고
    • The formation of cyclopropane fatty acids in Salmonella enterica serovar Typhimurium
    • Kim BH, Kim S, Kim HG, Lee J, Lee IS, Park YK (2005) The formation of cyclopropane fatty acids in Salmonella enterica serovar Typhimurium. Microbiology 151: 209-218
    • (2005) Microbiology , vol.151 , pp. 209-218
    • Kim, B.H.1    Kim, S.2    Kim, H.G.3    Lee, J.4    Lee, I.S.5    Park, Y.K.6
  • 34
    • 77952876523 scopus 로고    scopus 로고
    • RNA-Mediated regulation in bacteria: From natural to artificial systems
    • Lioliou E, Romilly C, Romby P, Fechter P (2010) RNA-Mediated regulation in bacteria: From natural to artificial systems. Nat Biotechnol 27: 222-235
    • (2010) Nat Biotechnol , vol.27 , pp. 222-235
    • Lioliou, E.1    Romilly, C.2    Romby, P.3    Fechter, P.4
  • 35
    • 84870247169 scopus 로고    scopus 로고
    • The ribosome binding site of a mini-ORF protects a T3SS mRNA from degradation by RNase e
    • Lodato PB, Hsieh PK, Belasco JG, Kaper JB (2012) The ribosome binding site of a mini-ORF protects a T3SS mRNA from degradation by RNase E. Mol Microbiol 86: 1167-1182
    • (2012) Mol Microbiol , vol.86 , pp. 1167-1182
    • Lodato, P.B.1    Hsieh, P.K.2    Belasco, J.G.3    Kaper, J.B.4
  • 36
    • 80052213074 scopus 로고    scopus 로고
    • In vitro transcription profiling of the sigmaS subunit of bacterial RNA polymerase: Re-Definition of the sigmaS regulon and identification of sigmaS-Specific promoter sequence elements
    • Maciag A, Peano C, Pietrelli A, Egli T, De Bellis G, Landini P (2011) In vitro transcription profiling of the sigmaS subunit of bacterial RNA polymerase: Re-Definition of the sigmaS regulon and identification of sigmaS-Specific promoter sequence elements. Nucleic Acids Res 39: 5338-5355
    • (2011) Nucleic Acids Res , vol.39 , pp. 5338-5355
    • Maciag, A.1    Peano, C.2    Pietrelli, A.3    Egli, T.4    De Bellis, G.5    Landini, P.6
  • 37
    • 84880133416 scopus 로고    scopus 로고
    • Determinants in the rpsT mRNAs recognized by the 50-Sensor domain of Rnase e
    • Mackie GA (2013a) Determinants in the rpsT mRNAs recognized by the 50-Sensor domain of RNase E. Mol Microbiol 89: 388-402
    • (2013) Mol Microbiol , vol.89 , pp. 388-402
    • Mackie, G.A.1
  • 38
    • 84871321022 scopus 로고    scopus 로고
    • Rnase E: At the interface of bacterial RNA processing and decay
    • Mackie GA (2013b) RNase E: At the interface of bacterial RNA processing and decay. Nat Rev Microbiol 11: 45-57
    • (2013) Nat Rev Microbiol , vol.11 , pp. 45-57
    • Mackie, G.A.1
  • 39
    • 48749115865 scopus 로고    scopus 로고
    • RNA, but not protein partners, is directly responsible for translational silencing by a bacterial Hfq-Binding small RNA
    • Maki K, Uno K, Morita T, Aiba H (2008) RNA, but not protein partners, is directly responsible for translational silencing by a bacterial Hfq-Binding small RNA. Proc Natl Acad Sci USA 105: 10332-10337
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 10332-10337
    • Maki, K.1    Uno, K.2    Morita, T.3    Aiba, H.4
  • 40
    • 0141860088 scopus 로고    scopus 로고
    • Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli
    • Masse E, Escorcia FE, Gottesman S (2003) Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli. Genes Dev 17: 2374-2383
    • (2003) Genes Dev , vol.17 , pp. 2374-2383
    • Masse, E.1    Escorcia, F.E.2    Gottesman, S.3
  • 41
    • 26444505976 scopus 로고    scopus 로고
    • Effect of RyhB small RNA on global iron use in Escherichia coli
    • Masse E, Vanderpool CK, Gottesman S (2005) Effect of RyhB small RNA on global iron use in Escherichia coli. J Bacteriol 187: 6962-6971
    • (2005) J Bacteriol , vol.187 , pp. 6962-6971
    • Masse, E.1    Vanderpool, C.K.2    Gottesman, S.3
  • 42
    • 0142240435 scopus 로고    scopus 로고
    • Coincident Hfq binding and RNase e cleavage sites on mRNA and small regulatory RNAs
    • Moll I, Afonyushkin T, Vytvytska O, Kaberdin VR, Blasi U (2003) Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAs. RNA 9: 1308-1314
    • (2003) RNA , vol.9 , pp. 1308-1314
    • Moll, I.1    Afonyushkin, T.2    Vytvytska, O.3    Kaberdin, V.R.4    Blasi, U.5
  • 43
    • 72049119860 scopus 로고    scopus 로고
    • A PhoQ/P-Regulated small RNA regulates sensitivity of Escherichia coli to antimicrobial peptides
    • Moon K, Gottesman S (2009) A PhoQ/P-Regulated small RNA regulates sensitivity of Escherichia coli to antimicrobial peptides. Mol Microbiol 74: 1314-1330
    • (2009) Mol Microbiol , vol.74 , pp. 1314-1330
    • Moon, K.1    Gottesman, S.2
  • 44
    • 84879498032 scopus 로고    scopus 로고
    • Complex transcriptional and post-Transcriptional regulation of an enzyme for Lipopolysaccharide modification
    • Moon K, Six DA, Lee HJ, Raetz CR, Gottesman S (2013) Complex transcriptional and post-Transcriptional regulation of an enzyme for Lipopolysaccharide modification. Mol Microbiol 89: 52-64
    • (2013) Mol Microbiol , vol.89 , pp. 52-64
    • Moon, K.1    Six, D.A.2    Lee, H.J.3    Raetz, C.R.4    Gottesman, S.5
  • 45
    • 79951701614 scopus 로고    scopus 로고
    • RNase e action at a distance: Degradation of target mRNAs mediated by an Hfq-Binding small RNA in bacteria
    • Morita T, Aiba H (2011) RNase E action at a distance: Degradation of target mRNAs mediated by an Hfq-Binding small RNA in bacteria. Genes Dev 25: 294-298
    • (2011) Genes Dev , vol.25 , pp. 294-298
    • Morita, T.1    Aiba, H.2
  • 46
    • 24944507588 scopus 로고    scopus 로고
    • RNase E-Based ribonucleoprotein complexes: Mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs
    • Morita T, Maki K, Aiba H (2005) RNase E-Based ribonucleoprotein complexes: Mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs. Genes Dev 19: 2176-2186
    • (2005) Genes Dev , vol.19 , pp. 2176-2186
    • Morita, T.1    Maki, K.2    Aiba, H.3
  • 47
    • 1842476305 scopus 로고    scopus 로고
    • An HPLC-MS approach for analysis of very long chain fatty acids and other apolar compounds on octadecyl-Silica phase using partly miscible solvents
    • Nagy K, Jakab A, Fekete J, Vekey K (2004) An HPLC-MS approach for analysis of very long chain fatty acids and other apolar compounds on octadecyl-Silica phase using partly miscible solvents. Anal Chem 76: 1935-1941
    • (2004) Anal Chem , vol.76 , pp. 1935-1941
    • Nagy, K.1    Jakab, A.2    Fekete, J.3    Vekey, K.4
  • 48
    • 77956631743 scopus 로고    scopus 로고
    • Stabilization of Clostridium perfringens collagenase mRNA by VR-RNAdependent cleavage in 50 leader sequence
    • Obana N, Shirahama Y, Abe K, Nakamura K (2010) Stabilization of Clostridium perfringens collagenase mRNA by VR-RNAdependent cleavage in 50 leader sequence. Mol Microbiol 77: 1416-1428
    • (2010) Mol Microbiol , vol.77 , pp. 1416-1428
    • Obana, N.1    Shirahama, Y.2    Abe, K.3    Nakamura, K.4
  • 49
    • 79151470965 scopus 로고    scopus 로고
    • RNase III participates in GadY-Dependent cleavage of the gadX-GadW mRNA
    • Opdyke JA, Fozo EM, Hemm MR, Storz G (2011) RNase III participates in GadY-Dependent cleavage of the gadX-GadW mRNA. J Mol Biol 406: 29-43
    • (2011) J Mol Biol , vol.406 , pp. 29-43
    • Opdyke, J.A.1    Fozo, E.M.2    Hemm, M.R.3    Storz, G.4
  • 50
    • 4944264194 scopus 로고    scopus 로고
    • GadY, a small-RNA regulator of acid response genes in Escherichia coli
    • Opdyke JA, Kang JG, Storz G (2004) GadY, a small-RNA regulator of acid response genes in Escherichia coli. J Bacteriol 186: 6698-6705
    • (2004) J Bacteriol , vol.186 , pp. 6698-6705
    • Opdyke, J.A.1    Kang, J.G.2    Storz, G.3
  • 52
    • 78650532236 scopus 로고    scopus 로고
    • Evidence for an autonomous 50 target recognition domain in an Hfq-Associated small RNA
    • Papenfort K, Bouvier M, Mika F, Sharma CM, Vogel J (2010) Evidence for an autonomous 50 target recognition domain in an Hfq-Associated small RNA. Proc Natl Acad Sci USA 107: 20435-20440
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 20435-20440
    • Papenfort, K.1    Bouvier, M.2    Mika, F.3    Sharma, C.M.4    Vogel, J.5
  • 53
    • 33751383274 scopus 로고    scopus 로고
    • SigmaE-Dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay
    • Papenfort K, Pfeiffer V, Mika F, Lucchini S, Hinton JC, Vogel J (2006) SigmaE-Dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay. Mol Microbiol 62: 1674-1688
    • (2006) Mol Microbiol , vol.62 , pp. 1674-1688
    • Papenfort, K.1    Pfeiffer, V.2    Mika, F.3    Lucchini, S.4    Hinton, J.C.5    Vogel, J.6
  • 54
    • 84859451156 scopus 로고    scopus 로고
    • The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair
    • Papenfort K, Podkaminski D, Hinton JC, Vogel J (2012) The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair. Proc Natl Acad Sci USA 109: E757-E764
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 757-764
    • Papenfort, K.1    Podkaminski, D.2    Hinton, J.C.3    Vogel, J.4
  • 55
    • 84876234571 scopus 로고    scopus 로고
    • Small RNA-Mediated activation of sugar phosphatase mRNA regulates glucose homeostasis
    • Papenfort K, Sun Y, Miyakoshi M, Vanderpool CK, Vogel J (2013) Small RNA-Mediated activation of sugar phosphatase mRNA regulates glucose homeostasis. Cell 153: 426-437
    • (2013) Cell , vol.153 , pp. 426-437
    • Papenfort, K.1    Sun, Y.2    Miyakoshi, M.3    Vanderpool, C.K.4    Vogel, J.5
  • 56
    • 84858446579 scopus 로고    scopus 로고
    • MicroRNAs and their targets: Recognition, regulation and an emerging reciprocal relationship
    • Pasquinelli AE (2012) MicroRNAs and their targets: Recognition, regulation and an emerging reciprocal relationship. Nat Rev Genet 13: 271-282
    • (2012) Nat Rev Genet , vol.13 , pp. 271-282
    • Pasquinelli, A.E.1
  • 57
    • 68249156618 scopus 로고    scopus 로고
    • Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation
    • Pfeiffer V, Papenfort K, Lucchini S, Hinton JC, Vogel J (2009) Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation. Nat Struct Mol Biol 16: 840-846
    • (2009) Nat Struct Mol Biol , vol.16 , pp. 840-846
    • Pfeiffer, V.1    Papenfort, K.2    Lucchini, S.3    Hinton, J.C.4    Vogel, J.5
  • 58
    • 36148969305 scopus 로고    scopus 로고
    • A small non-Coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genome
    • Pfeiffer V, Sittka A, Tomer R, Tedin K, Brinkmann V, Vogel J (2007) A small non-Coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genome. Mol Microbiol 66: 1174-1191
    • (2007) Mol Microbiol , vol.66 , pp. 1174-1191
    • Pfeiffer, V.1    Sittka, A.2    Tomer, R.3    Tedin, K.4    Brinkmann, V.5    Vogel, J.6
  • 59
    • 79951700321 scopus 로고    scopus 로고
    • Small RNA-Induced mRNA degradation achieved through both translation block and activated cleavage
    • Prevost K, Desnoyers G, Jacques JF, Lavoie F, Masse E (2011) Small RNA-Induced mRNA degradation achieved through both translation block and activated cleavage. Genes Dev 25: 385-396
    • (2011) Genes Dev , vol.25 , pp. 385-396
    • Prevost, K.1    Desnoyers, G.2    Jacques, J.F.3    Lavoie, F.4    Masse, E.5
  • 60
    • 79960623040 scopus 로고    scopus 로고
    • The Sm-Like RNA chaperone Hfq mediates transcription antitermination at Rho-Dependent terminators
    • Rabhi M, Espeli O, Schwartz A, Cayrol B, Rahmouni AR, Arluison V, Boudvillain M (2011) The Sm-Like RNA chaperone Hfq mediates transcription antitermination at Rho-Dependent terminators. EMBO J 30: 2805-2816
    • (2011) EMBO J , vol.30 , pp. 2805-2816
    • Rabhi, M.1    Espeli, O.2    Schwartz, A.3    Cayrol, B.4    Rahmouni, A.R.5    Arluison, V.6    Boudvillain, M.7
  • 61
    • 78649989435 scopus 로고    scopus 로고
    • The group A Streptococcus small regulatory RNA FasX enhances streptokinase activity by increasing the stability of the ska mRNA transcript
    • Ramirez-Pena E, Trevino J, Liu Z, Perez N, Sumby P (2010) The group A Streptococcus small regulatory RNA FasX enhances streptokinase activity by increasing the stability of the ska mRNA transcript. Mol Microbiol 78: 1332-1347
    • (2010) Mol Microbiol , vol.78 , pp. 1332-1347
    • Ramirez-Pena, E.1    Trevino, J.2    Liu, Z.3    Perez, N.4    Sumby, P.5
  • 62
    • 34547564982 scopus 로고    scopus 로고
    • PknotsRG: RNA pseudoknot folding including near-Optimal structures and sliding windows
    • Reeder J, Steffen P, Giegerich R (2007) pknotsRG: RNA pseudoknot folding including near-Optimal structures and sliding windows. Nucleic Acids Res 35: W320-W324
    • (2007) Nucleic Acids Res , vol.35 , pp. 320-324
    • Reeder, J.1    Steffen, P.2    Giegerich, R.3
  • 63
    • 4644237189 scopus 로고    scopus 로고
    • Fast and effective prediction of microRNA/target duplexes
    • Rehmsmeier M, Steffen P, Hochsmann M, Giegerich R (2004) Fast and effective prediction of microRNA/target duplexes. RNA 10: 1507-1517
    • (2004) RNA , vol.10 , pp. 1507-1517
    • Rehmsmeier, M.1    Steffen, P.2    Hochsmann, M.3    Giegerich, R.4
  • 64
    • 84867056798 scopus 로고    scopus 로고
    • Small RNA binding-Site multiplicity involved in translational regulation of a polycistronic mRNA
    • Rice JB, Balasubramanian D, Vanderpool CK (2012) Small RNA binding-Site multiplicity involved in translational regulation of a polycistronic mRNA. Proc Natl Acad Sci USA 109: E2691-E2698
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 2691-2698
    • Rice, J.B.1    Balasubramanian, D.2    Vanderpool, C.K.3
  • 65
    • 84881478217 scopus 로고    scopus 로고
    • Functional determinants of the quorum-Sensing non-Coding RNAs and their roles in target regulation
    • Shao Y, Feng L, Rutherford ST, Papenfort K, Bassler BL (2013) Functional determinants of the quorum-Sensing non-Coding RNAs and their roles in target regulation. Embo J 32: 2158-2171
    • (2013) Embo J , vol.32 , pp. 2158-2171
    • Shao, Y.1    Feng, L.2    Rutherford, S.T.3    Papenfort, K.4    Bassler, B.L.5
  • 66
    • 80051929071 scopus 로고    scopus 로고
    • Pervasive post-Transcriptional control of genes involved in amino acid metabolism by the Hfq-Dependent GcvB small RNA
    • Sharma CM, Papenfort K, Pernitzsch SR, Mollenkopf HJ, Hinton JC, Vogel J (2011) Pervasive post-Transcriptional control of genes involved in amino acid metabolism by the Hfq-Dependent GcvB small RNA. Mol Microbiol 81: 1144-1165
    • (2011) Mol Microbiol , vol.81 , pp. 1144-1165
    • Sharma, C.M.1    Papenfort, K.2    Pernitzsch, S.R.3    Mollenkopf, H.J.4    Hinton, J.C.5    Vogel, J.6
  • 67
    • 33845713571 scopus 로고    scopus 로고
    • The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium
    • Sittka A, Pfeiffer V, Tedin K, Vogel J (2007) The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium. Mol Microbiol 63: 193-217
    • (2007) Mol Microbiol , vol.63 , pp. 193-217
    • Sittka, A.1    Pfeiffer, V.2    Tedin, K.3    Vogel, J.4
  • 69
    • 79955364234 scopus 로고    scopus 로고
    • Antisense RNA protects mRNA from RNase e degradation by RNA-RNA duplex formation during phage infection
    • Stazic D, Lindell D, Steglich C (2011) Antisense RNA protects mRNA from RNase E degradation by RNA-RNA duplex formation during phage infection. Nucleic Acids Res 39: 4890-4899
    • (2011) Nucleic Acids Res , vol.39 , pp. 4890-4899
    • Stazic, D.1    Lindell, D.2    Steglich, C.3
  • 71
    • 80053019485 scopus 로고    scopus 로고
    • Regulation by small RNAs in bacteria: Expanding frontiers
    • Storz G, Vogel J, Wassarman KM (2011) Regulation by small RNAs in bacteria: Expanding frontiers. Mol Cell 43: 880-891
    • (2011) Mol Cell , vol.43 , pp. 880-891
    • Storz, G.1    Vogel, J.2    Wassarman, K.M.3
  • 72
    • 33847386673 scopus 로고    scopus 로고
    • Translational control and target recognition by Escherichia coli small RNAs in vivo
    • Urban JH, Vogel J (2007) Translational control and target recognition by Escherichia coli small RNAs in vivo. Nucleic Acids Res 35: 1018-1037
    • (2007) Nucleic Acids Res , vol.35 , pp. 1018-1037
    • Urban, J.H.1    Vogel, J.2
  • 74
    • 79960433506 scopus 로고    scopus 로고
    • Hfq and its constellation of RNA
    • Vogel J, Luisi BF (2011) Hfq and its constellation of RNA. Nat Rev Microbiol 9: 578-589
    • (2011) Nat Rev Microbiol , vol.9 , pp. 578-589
    • Vogel, J.1    Luisi, B.F.2
  • 75
    • 0028227365 scopus 로고
    • The growth phase-Dependent synthesis of cyclopropane fatty acids in Escherichia coli is the result of an RpoS(KatF)-Dependent promoter plus enzyme instability
    • Wang AY, Cronan Jr JE (1994) The growth phase-Dependent synthesis of cyclopropane fatty acids in Escherichia coli is the result of an RpoS(KatF)-Dependent promoter plus enzyme instability. Mol Microbiol 11: 1009-1017
    • (1994) Mol Microbiol , vol.11 , pp. 1009-1017
    • Wang, A.Y.1    Cronan Jr., J.E.2
  • 76
    • 14244256556 scopus 로고    scopus 로고
    • Genome-Wide analysis of the general stress response network in Escherichia coli: SigmaS-Dependent genes, promoters, and sigma factor selectivity
    • Weber H, Polen T, Heuveling J, Wendisch VF, Hengge R (2005) Genome-Wide analysis of the general stress response network in Escherichia coli: SigmaS-Dependent genes, promoters, and sigma factor selectivity. J Bacteriol 187: 1591-1603
    • (2005) J Bacteriol , vol.187 , pp. 1591-1603
    • Weber, H.1    Polen, T.2    Heuveling, J.3    Wendisch, V.F.4    Hengge, R.5
  • 78
    • 84883809477 scopus 로고    scopus 로고
    • Mutations in interaction surfaces differentially impact E. Coli Hfq association with small RNAs and their mRNA targets
    • Zhang A, Schu DJ, Tjaden BC, Storz G, Gottesman S (2013) Mutations in interaction surfaces differentially impact E. Coli Hfq association with small RNAs and their mRNA targets. J Mol Biol 425: 3678-3697
    • (2013) J Mol Biol , vol.425 , pp. 3678-3697
    • Zhang, A.1    Schu, D.J.2    Tjaden, B.C.3    Storz, G.4    Gottesman, S.5
  • 80
    • 39149115737 scopus 로고    scopus 로고
    • Membrane lipid homeostasis in bacteria
    • Zhang YM, Rock CO (2008) Membrane lipid homeostasis in bacteria. Nat Rev Microbiol 6: 222-233
    • (2008) Nat Rev Microbiol , vol.6 , pp. 222-233
    • Zhang, Y.M.1    Rock, C.O.2


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