-
1
-
-
84878580683
-
Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles
-
Bai X.-C., Fernandez I.S., McMullan G., Scheres S.H., Kühlbrandt W. Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles. eLife 2013, 2.
-
(2013)
eLife
, vol.2
-
-
Bai, X.-C.1
Fernandez, I.S.2
McMullan, G.3
Scheres, S.H.4
Kühlbrandt, W.5
-
2
-
-
84862783740
-
Beam-induced motion of vitrified specimen on holey carbon film
-
Brilot A.F., Chen J.Z., Cheng A., Pan J., Harrison S.C., Potter C.S., Carragher B., Henderson R., Grigorieff N. Beam-induced motion of vitrified specimen on holey carbon film. J. Struct. Biol. 2012, 177:630-637.
-
(2012)
J. Struct. Biol.
, vol.177
, pp. 630-637
-
-
Brilot, A.F.1
Chen, J.Z.2
Cheng, A.3
Pan, J.4
Harrison, S.C.5
Potter, C.S.6
Carragher, B.7
Henderson, R.8
Grigorieff, N.9
-
3
-
-
84868573207
-
Movies of ice-embedded particles enhance resolution in electron cryo-microscopy
-
Campbell M.G., Cheng A., Brilot A.F., Moeller A., Lyumkis D., Veesler D., Pan J., Harrison S.C., Potter C.S., Carragher B., Grigorieff N. Movies of ice-embedded particles enhance resolution in electron cryo-microscopy. Structure 2012, 20(11):1823-1828.
-
(2012)
Structure
, vol.20
, Issue.11
, pp. 1823-1828
-
-
Campbell, M.G.1
Cheng, A.2
Brilot, A.F.3
Moeller, A.4
Lyumkis, D.5
Veesler, D.6
Pan, J.7
Harrison, S.C.8
Potter, C.S.9
Carragher, B.10
Grigorieff, N.11
-
4
-
-
79952163890
-
Structural basis for scaffolding-mediated assembly and maturation of a dsDNA virus
-
Chen D.-H., Baker M.L., Hryc C.F., DiMaio F., Jakana J., Wu W., Dougherty M., Haase-Pettingell C., Schmid M.F., Jiang W., Baker D., King J.A., Chiu W. Structural basis for scaffolding-mediated assembly and maturation of a dsDNA virus. Proc. Natl. Acad. Sci. USA 2011, 108:1355-1360.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 1355-1360
-
-
Chen, D.-H.1
Baker, M.L.2
Hryc, C.F.3
DiMaio, F.4
Jakana, J.5
Wu, W.6
Dougherty, M.7
Haase-Pettingell, C.8
Schmid, M.F.9
Jiang, W.10
Baker, D.11
King, J.A.12
Chiu, W.13
-
5
-
-
67649807795
-
Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM
-
Chen J.Z., Settembre E.C., Aoki S.T., Zhang X., Bellamy A.R., Dormitzer P.R., Harrison S.C., Grigorieff N. Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM. Proc. Natl. Acad. Sci. USA 2009, 106:10644-10648.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 10644-10648
-
-
Chen, J.Z.1
Settembre, E.C.2
Aoki, S.T.3
Zhang, X.4
Bellamy, A.R.5
Dormitzer, P.R.6
Harrison, S.C.7
Grigorieff, N.8
-
6
-
-
79959668319
-
Reaching the information limit in cryo-EM of biological macromolecules: experimental aspects
-
Glaeser R.M., Hall R.J. Reaching the information limit in cryo-EM of biological macromolecules: experimental aspects. Biophys. J. 2011, 100:2331-2337.
-
(2011)
Biophys. J.
, vol.100
, pp. 2331-2337
-
-
Glaeser, R.M.1
Hall, R.J.2
-
7
-
-
79952438103
-
Precise beam-tilt alignment and collimation are required to minimize the phase error associated with coma in high-resolution cryo-EM
-
Glaeser R.M., Typke D., Tiemeijer P.C., Pulokas J. Precise beam-tilt alignment and collimation are required to minimize the phase error associated with coma in high-resolution cryo-EM. J. Struct. Biol. 2011, 174(1):1-10.
-
(2011)
J. Struct. Biol.
, vol.174
, Issue.1
, pp. 1-10
-
-
Glaeser, R.M.1
Typke, D.2
Tiemeijer, P.C.3
Pulokas, J.4
-
8
-
-
33845348200
-
FREALIGN: high-resolution refinement of single particle structures
-
Grigorieff N. FREALIGN: high-resolution refinement of single particle structures. J. Struct. Biol. 2007, 157:117-125.
-
(2007)
J. Struct. Biol.
, vol.157
, pp. 117-125
-
-
Grigorieff, N.1
-
9
-
-
79953108462
-
Near-atomic resolution reconstructions of icosahedral viruses from electron cryo-microscopy
-
Grigorieff N., Harrison S.C. Near-atomic resolution reconstructions of icosahedral viruses from electron cryo-microscopy. Curr. Opin. Struct. Biol. 2011, 21:265-273.
-
(2011)
Curr. Opin. Struct. Biol.
, vol.21
, pp. 265-273
-
-
Grigorieff, N.1
Harrison, S.C.2
-
10
-
-
0026523919
-
Image contrast in high-resolution electron microscopy of biological macromolecules: TMV in ice
-
Henderson R. Image contrast in high-resolution electron microscopy of biological macromolecules: TMV in ice. Ultramicroscopy 1992, 46:1-18.
-
(1992)
Ultramicroscopy
, vol.46
, pp. 1-18
-
-
Henderson, R.1
-
11
-
-
0029003107
-
The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules
-
Henderson R. The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules. Q. Rev. Biophys. 1995, 28(1995):171-193.
-
(1995)
Q. Rev. Biophys.
, vol.28
, Issue.1995
, pp. 171-193
-
-
Henderson, R.1
-
12
-
-
84876978430
-
Problems in obtaining perfect images by single-particle electron cryomicroscopy of biological structures in amorphous ice
-
Henderson R., McMullan G. Problems in obtaining perfect images by single-particle electron cryomicroscopy of biological structures in amorphous ice. J. Electron. Microsc. (Tokyo) 2013, 62:43-50.
-
(2013)
J. Electron. Microsc. (Tokyo)
, vol.62
, pp. 43-50
-
-
Henderson, R.1
McMullan, G.2
-
13
-
-
0344120730
-
Automated determination of parameters describing power spectra of micrograph images in electron microscopy
-
Huang Z., Baldwin P.R., Mullapudi S. Automated determination of parameters describing power spectra of micrograph images in electron microscopy. J. Struct. Biol. 2003, 2003(144):79-94.
-
(2003)
J. Struct. Biol.
, vol.2003
, Issue.144
, pp. 79-94
-
-
Huang, Z.1
Baldwin, P.R.2
Mullapudi, S.3
-
14
-
-
39849102970
-
Backbone structure of the infectious epsilon15 virus capsid revealed by electron cryomicroscopy
-
Jiang W., Baker M.L., Jakana J., Weigele P.R., King J., Chiu W. Backbone structure of the infectious epsilon15 virus capsid revealed by electron cryomicroscopy. Nature 2008, 451:1130-1134.
-
(2008)
Nature
, vol.451
, pp. 1130-1134
-
-
Jiang, W.1
Baker, M.L.2
Jakana, J.3
Weigele, P.R.4
King, J.5
Chiu, W.6
-
15
-
-
77956034102
-
The architecture and chemical stability of the archaeal Sulfolobus turreted icosahedral virus
-
Khayat R., Fu C.-Y., Ortmann A.C., Young M.J., Johnson J.E. The architecture and chemical stability of the archaeal Sulfolobus turreted icosahedral virus. J. Virol. 2010, 84:9575-9583.
-
(2010)
J. Virol.
, vol.84
, pp. 9575-9583
-
-
Khayat, R.1
Fu, C.-Y.2
Ortmann, A.C.3
Young, M.J.4
Johnson, J.E.5
-
16
-
-
60649103238
-
Appion: an integrated, database-driven pipeline to facilitate EM image processing
-
Lander G.C., Stagg S.M., Voss N.R., Cheng A., Fellmann D., Pulokas J., Yoshioka C., Irving C., Mulder A., Lau P.-W., Lyumkis D., Potter C.S., Carragher B. Appion: an integrated, database-driven pipeline to facilitate EM image processing. J. Struct. Biol. 2009, 166:95-102.
-
(2009)
J. Struct. Biol.
, vol.166
, pp. 95-102
-
-
Lander, G.C.1
Stagg, S.M.2
Voss, N.R.3
Cheng, A.4
Fellmann, D.5
Pulokas, J.6
Yoshioka, C.7
Irving, C.8
Mulder, A.9
Lau, P.-W.10
Lyumkis, D.11
Potter, C.S.12
Carragher, B.13
-
17
-
-
84864829908
-
Structure of AAV-DJ, a retargeted gene therapy vector: cryo-electron microscopy at 4.5Å resolution
-
Lerch T.F., O'Donnell J.K., Meyer N.L., Xie Q., Taylor K.A., Stagg S.M., Chapman M.S. Structure of AAV-DJ, a retargeted gene therapy vector: cryo-electron microscopy at 4.5Å resolution. Structure (London, England: 1993) 2012, 20:1310-1320.
-
(2012)
Structure (London, England: 1993)
, vol.20
, pp. 1310-1320
-
-
Lerch, T.F.1
O'Donnell, J.K.2
Meyer, N.L.3
Xie, Q.4
Taylor, K.A.5
Stagg, S.M.6
Chapman, M.S.7
-
18
-
-
84880848354
-
Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM
-
Li X., Mooney P., Zheng S., Booth C.R., Braunfeld M.B., Gubbens S., Agard D.A., Cheng Y. Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM. Nat. Methods 2013, 10(6):584-590.
-
(2013)
Nat. Methods
, vol.10
, Issue.6
, pp. 584-590
-
-
Li, X.1
Mooney, P.2
Zheng, S.3
Booth, C.R.4
Braunfeld, M.B.5
Gubbens, S.6
Agard, D.A.7
Cheng, Y.8
-
19
-
-
77956098333
-
Atomic structure of human adenovirus by cryo-EM reveals interactions among protein networks
-
Liu H., Jin L., Koh S.B.S., Atanasov I., Schein S., Wu L., Zhou Z.H. Atomic structure of human adenovirus by cryo-EM reveals interactions among protein networks. Science 2010, 329:1038-1043.
-
(2010)
Science
, vol.329
, pp. 1038-1043
-
-
Liu, H.1
Jin, L.2
Koh, S.B.S.3
Atanasov, I.4
Schein, S.5
Wu, L.6
Zhou, Z.H.7
-
20
-
-
77954384340
-
Structural changes in a marine podovirus associated with release of its genome into Prochlorococcus
-
Liu X., Zhang Q., Murata K., Baker M.L., Sullivan M.B., Fu C., Dougherty M.T., Schmid M.F., Osburne M.S., Chisholm S.W., Chiu W. Structural changes in a marine podovirus associated with release of its genome into Prochlorococcus. Nat. Struct. Mol. Biol. 2010, 17:830-836.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 830-836
-
-
Liu, X.1
Zhang, Q.2
Murata, K.3
Baker, M.L.4
Sullivan, M.B.5
Fu, C.6
Dougherty, M.T.7
Schmid, M.F.8
Osburne, M.S.9
Chisholm, S.W.10
Chiu, W.11
-
21
-
-
0038441501
-
Accurate determination of local defocus and specimen tilt in electron microscopy
-
Mindell J.A., Grigorieff N. Accurate determination of local defocus and specimen tilt in electron microscopy. J. Struct. Biol. 2003, 142:334-347.
-
(2003)
J. Struct. Biol.
, vol.142
, pp. 334-347
-
-
Mindell, J.A.1
Grigorieff, N.2
-
22
-
-
0346816491
-
FindEM-a fast, efficient program for automatic selection of particles from electron micrographs
-
Roseman A.M. FindEM-a fast, efficient program for automatic selection of particles from electron micrographs. J. Struct. Biol. 2004, 145:91-99.
-
(2004)
J. Struct. Biol.
, vol.145
, pp. 91-99
-
-
Roseman, A.M.1
-
23
-
-
0142042865
-
Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy
-
Rosenthal P.B., Henderson R. Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy. J. Mol. Biol. 2003, 333:721-745.
-
(2003)
J. Mol. Biol.
, vol.333
, pp. 721-745
-
-
Rosenthal, P.B.1
Henderson, R.2
-
24
-
-
84866078359
-
Prevention of overfitting in cryo-EM structure determination
-
Scheres S.H.W., Chen S. Prevention of overfitting in cryo-EM structure determination. Nat. Methods 2012, 9:853-854.
-
(2012)
Nat. Methods
, vol.9
, pp. 853-854
-
-
Scheres, S.H.W.1
Chen, S.2
-
25
-
-
78751643951
-
Atomic model of an infectious rotavirus particle
-
Settembre E.C., Chen J.Z., Dormitzer P.R., Grigorieff N., Harrison S.C. Atomic model of an infectious rotavirus particle. EMBO J. 2011, 30:408-416.
-
(2011)
EMBO J.
, vol.30
, pp. 408-416
-
-
Settembre, E.C.1
Chen, J.Z.2
Dormitzer, P.R.3
Grigorieff, N.4
Harrison, S.C.5
-
26
-
-
84880273391
-
Noise models and cryo-EM drift correction with a direct-electron camera
-
Shigematsu H., Sigworth F.J. Noise models and cryo-EM drift correction with a direct-electron camera. Ultramicroscopy 2013, 131C:61-69.
-
(2013)
Ultramicroscopy
, vol.131 C
, pp. 61-69
-
-
Shigematsu, H.1
Sigworth, F.J.2
-
27
-
-
76749094569
-
The resolution dependence of optimal exposures in liquid nitrogen temperature electron cryomicroscopy of catalase crystals
-
Smith E.A., Bueler S.A., Rubinstein J.L. The resolution dependence of optimal exposures in liquid nitrogen temperature electron cryomicroscopy of catalase crystals. J. Struct. Biol. 2010, 169(3):431-437.
-
(2010)
J. Struct. Biol.
, vol.169
, Issue.3
, pp. 431-437
-
-
Smith, E.A.1
Bueler, S.A.2
Rubinstein, J.L.3
-
28
-
-
8844219659
-
Noise bias in the refinement of structures derived from single particles
-
Stewart A., Grigorieff N. Noise bias in the refinement of structures derived from single particles. Ultramicroscopy 2004, 102:67-84.
-
(2004)
Ultramicroscopy
, vol.102
, pp. 67-84
-
-
Stewart, A.1
Grigorieff, N.2
-
29
-
-
20544468931
-
Automated molecular microscopy: the new Leginon system
-
Suloway C., Pulokas J., Fellmann D., Cheng A. Automated molecular microscopy: the new Leginon system. J. Struct. Biol. 2005, 151:41-60.
-
(2005)
J. Struct. Biol.
, vol.151
, pp. 41-60
-
-
Suloway, C.1
Pulokas, J.2
Fellmann, D.3
Cheng, A.4
-
30
-
-
20244379996
-
Single-particle electron cryo-microscopy: towards atomic resolution
-
van Heel M., Gowen B., Matadeen R., Orlova E.V., Finn R., Pape T., Cohen D., Stark H., Schmidt R., Schatz M., Patwardhan A. Single-particle electron cryo-microscopy: towards atomic resolution. Q. Rev. Biophys. 2000, 33(4):307-369.
-
(2000)
Q. Rev. Biophys.
, vol.33
, Issue.4
, pp. 307-369
-
-
van Heel, M.1
Gowen, B.2
Matadeen, R.3
Orlova, E.V.4
Finn, R.5
Pape, T.6
Cohen, D.7
Stark, H.8
Schmidt, R.9
Schatz, M.10
Patwardhan, A.11
-
31
-
-
84875859692
-
Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography
-
Veesler D., Ng T.S., Sendamarai A.K., Eilers B.J., Lawrence C.M., Lok S.M., Young M.J., Johnson J.E., Fu C.Y. Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography. Proc. Natl. Acad. Sci. USA 2013, 110:5504-5509.
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 5504-5509
-
-
Veesler, D.1
Ng, T.S.2
Sendamarai, A.K.3
Eilers, B.J.4
Lawrence, C.M.5
Lok, S.M.6
Young, M.J.7
Johnson, J.E.8
Fu, C.Y.9
-
32
-
-
77950914670
-
Subunit interactions in bovine papillomavirus
-
Wolf M., Garcea R.L., Grigorieff N., Harrison S.C. Subunit interactions in bovine papillomavirus. Proc. Natl. Acad. Sci. USA 2010, 107:6298-6303.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 6298-6303
-
-
Wolf, M.1
Garcea, R.L.2
Grigorieff, N.3
Harrison, S.C.4
-
33
-
-
84860006848
-
Cryo-EM structure of a transcribing cypovirus
-
Yang C., Ji G., Liu H., Zhang K., Liu G., Sun F., Zhu P., Cheng L. Cryo-EM structure of a transcribing cypovirus. Proc. Natl. Acad. Sci. USA 2012, 109:6118-6123.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 6118-6123
-
-
Yang, C.1
Ji, G.2
Liu, H.3
Zhang, K.4
Liu, G.5
Sun, F.6
Zhu, P.7
Cheng, L.8
-
34
-
-
43749092377
-
3.88Å structure of cytoplasmic polyhedrosis virus by cryo-electron microscopy
-
Yu X., Jin L., Zhou Z.H. 3.88Å structure of cytoplasmic polyhedrosis virus by cryo-electron microscopy. Nature 2008, 453:415-419.
-
(2008)
Nature
, vol.453
, pp. 415-419
-
-
Yu, X.1
Jin, L.2
Zhou, Z.H.3
-
35
-
-
84872048730
-
Cryo-EM structure of the mature dengue virus at 3.5-Å resolution
-
Zhang X., Ge P., Yu X., Brannan J.M., Bi G., Zhang Q., Schein S., Zhou Z.H. Cryo-EM structure of the mature dengue virus at 3.5-Å resolution. Nat. Struct. Mol. Biol. 2013, 20(1):105-110.
-
(2013)
Nat. Struct. Mol. Biol.
, vol.20
, Issue.1
, pp. 105-110
-
-
Zhang, X.1
Ge, P.2
Yu, X.3
Brannan, J.M.4
Bi, G.5
Zhang, Q.6
Schein, S.7
Zhou, Z.H.8
-
36
-
-
80052731717
-
4.4Å cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus
-
Zhang R., Hryc C.F., Cong Y., Liu X., Jakana J. 4.4Å cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus. EMBO J. 2011, 30:3854-3863.
-
(2011)
EMBO J.
, vol.30
, pp. 3854-3863
-
-
Zhang, R.1
Hryc, C.F.2
Cong, Y.3
Liu, X.4
Jakana, J.5
-
37
-
-
77951912692
-
3.3Å cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry
-
Zhang X., Jin L., Fang Q., Hui W.H., Zhou Z.H. 3.3Å cryo-EM structure of a nonenveloped virus reveals a priming mechanism for cell entry. Cell 2010, 141:472-482.
-
(2010)
Cell
, vol.141
, pp. 472-482
-
-
Zhang, X.1
Jin, L.2
Fang, Q.3
Hui, W.H.4
Zhou, Z.H.5
-
38
-
-
41149086034
-
Near-atomic resolution using electron cryomicroscopy and single-particle reconstruction
-
Zhang X., Settembre E., Xu C., Dormitzer P.R., Bellamy R., Harrison S.C., Grigorieff N. Near-atomic resolution using electron cryomicroscopy and single-particle reconstruction. Proc. Natl. Acad. Sci. USA 2008, 105:1867-1872.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 1867-1872
-
-
Zhang, X.1
Settembre, E.2
Xu, C.3
Dormitzer, P.R.4
Bellamy, R.5
Harrison, S.C.6
Grigorieff, N.7
-
39
-
-
79960907297
-
Limiting factors in atomic resolution cryo electron microscopy: no simple tricks
-
Zhang X., Zhou Z.H. Limiting factors in atomic resolution cryo electron microscopy: no simple tricks. J. Struct. Biol. 2011, 175:253-263.
-
(2011)
J. Struct. Biol.
, vol.175
, pp. 253-263
-
-
Zhang, X.1
Zhou, Z.H.2
-
40
-
-
84868550621
-
Structure of Sputnik, a virophage, at 3.5-Å resolution
-
Zhang X., Sun S., Xiang Y., Wong J., Klose T., Raoult D., Rossmann M.G. Structure of Sputnik, a virophage, at 3.5-Å resolution. Proc. Natl. Acad. Sci. USA 2012, 109:18431-18436.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 18431-18436
-
-
Zhang, X.1
Sun, S.2
Xiang, Y.3
Wong, J.4
Klose, T.5
Raoult, D.6
Rossmann, M.G.7
|