Molecular and biochemical characterization of a new endoinulinase producing bacterial strain of Bacillus safensis AS-08

Biologia (Poland)

Volumn 68, Issue 6, 2013, Pages 1028-1033

  Singh, Ram S ^a   Singh, Rupinder P ^a   Yadav, Mukesh ^a  

^a PUNJABI UNIVERSITY   (India)

Author keywords

16S rDNA sequence; Bacillus safensis; biochemical characterization; endoinulinase; phylogenetic analysis; thin layer chromatography

Indexed keywords

EID: 84886908837     PISSN: 00063088     EISSN: 13369563     Source Type: Journal    
DOI: 10.2478/s11756-013-0259-2     Document Type: Article

References (34)

1. Allais J. J., Kammoun S., Blanc P., Girard C. & Baratti J. C. 1986. Isolation and characterization of bacterial strains with inulinase activity. Appl. Environ. Microbiol. 52: 1086-1090.
2. Altschul S. F., Gish W., Miller W., Myers E. W. & Lipman D. J. 1990. Basic local alignment search tool. J. Mol. Biol. 215: 403-410.
3. Benson D. A., Cavanaugh M., Clark K., Karsch-Mizrachi I., Lipman D. J., Ostell J. & Sayers E. W. 2013. GenBank. Nucleic Acids Res. 41(Database issue): D36-D42.
4. Cho Y. J., Sinha J., Park J. P. & Yun J. W. 2001. Production of inulooligosaccharides from chicory extract by endoinulinase from Xanthomonas oryzae No. 5. Enzyme Microb. Technol. 28: 439-445.
5. Cho Y. J. & Yun J. W. 2002. Purification and characterization of an endoinulinase from Xanthomonas oryzae No. 5. Process Biochem. 37: 1325-1331.
6. Gao W., Bao Y., Liu Y., Zhang X., Wang J. & An L. 2009. Characterization of thermo-stable endoinulinase from a new strain Bacillus smithii T7. Appl. Biochem. Biotechnol. 157: 498-506.
7. Gupta A. K. & Kaur N. 1997. Fructan storing plants a potential source of high fructose syrups. J. Sci. Indust. Res. 56: 447-452.
8. Kang S. I., Chang Y. J., Oh S. J. & Kim S. I. 1998. Purification and properties of an endo-inulinase from an Arthrobacter sp. Biotechnol. Lett. 20: 983-986.
9. Kango N. & Jain S. C. 2011. Production and properties of microbial inulinases: recent advances. Food Biotechnol. 25: 165-212.
10. Kaur N. & Gupta A. K. 2002. Applications of inulin and oligofructose in health and nutrition. J. Biosci. 27: 703-714.
11. Khaneja R., Perez-Fons L., Fakhry S., Baccigalupi L., Steiger S., To E., Sandmann G., Dong T. C., Ricca E., Fraser P. D. & Cutting S. M. 2010. Carotenoids found in Bacillus. J. Appl. Microbiol. 108: 1889-1902.
12. Kimura M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120.
13. Kumar S., Tamura K. & Nei M. 2004. MEGA3: integrated software for molecular evolutionary genetic analysis and sequence alignment. Brief. Bioinform. 5: 150-163.
14. Laowklom N., Chantanaphan R. & Pinphanichakarn P. 2012. Production, purification and characterization of inulinase from a newly isolated Streptomyces sp. CP01. Natural Resour. 3: 137-144.
15. Li A. X., Guo L. Z., Fu Q. & Lu W. D. 2011. A simple and rapid plate assay for screening of inulin degrading microorganisms using Lugol's iodine solution. Afr. J. Biotechnol. 10: 9518-9521.
16. Meyer D. & Stasse-Wolthuis M. 2009. The bifidogenic effect of inulin and oligofructose and its consequence for gut health. Eur. J. Clin. Nutr. 63: 1277-1289.
17. Miller G. L. 1959. Use of dinitrosalicylic acid reagent for determination of reducing sugar. Anal. Chem. 31: 426-428.
18. Motesharezadeh B. & Savaghebi-Firoozabadi G. R. 2011. Study of the increase in phytoremediation efficiency in a nickel polluted soil by the usage of native bacteria: Bacillus safensis FO. 036b and Micrococcus roseus M2. Caspian J. Environ. Sci. 9: 133-143.
19. Mutanda T., Wilhelmi B. S. & Whiteley C. G. 2008. Response surface methodology: synthesis of inulooligosaccharides with an endoinulinase from Aspergillus niger. Enzyme Microb. Technol. 43: 362-368.
20. Naidoo K., Ayyachamy M., Permaul K. & Singh S. 2009. Enhanced fructooligosaccharides and inulinase production by a Xanthomonas campestris pv. phaseoli KM 24 mutant. Bioprocess Biosyst. Eng. 32: 689-695.
21. Ohta K., Akimoto H. & Moriyama S. 2004. Fungal inulinases: enzymology, molecular cloning and biotechnology. J. Appl. Glycosci. 51: 247-254.
22. Park J. P., Oh T. K. & Yun J. W. 2001. Purification and characterization of a novel transfructosylating enzyme from Bacillus macerans EG-6. Proc. Biochem. 37: 471-476.
23. Park J. P. & Yun J. W. 2001. Utilization of chicory roots for microbial endoinulinase production. Lett. Appl. Microbiol. 33: 183-187.
24. Raja C. E. & Omine K. 2012. Arsenic, boron and salt resistant Bacillus safensis MS11 isolated from Mongolia desert soil. Afr. J. Biotechnol. 11: 2267-2275.
25. Reiffová K. & Nemcová R. 2006. Thin layer chromatography analysis of fructooligosaccharides in biological samples. J. Chromatogr. A 1110: 214-221.
26. Ricca E., Calabro V., Curcio S. & Iorio G. 2007. The state of the art in the production of fructose from inulin enzymatic hydrolysis. Crit. Rev. Biotechnol. 27: 129-145.
27. Saber-Molina M., Larque E., Torrilla F. & Zamora S. 2009. Dietary fructooligosaccharides and potential benefits on health. J. Physiol. Biochem. 65: 315-328.
28. Saitou N. & Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
29. Sangeetha P. T., Ramesh M. N. & Prapulla S. G. 2005. Recent trends in the microbial production, analysis and application of fructooligosaccharides. Trends Food Sci. Technol. 16: 442-457.
30. Satomi M., La Duc M. T. & Venkateswaran K. 2006. Bacillus safensis sp. nov., isolated from spacecraft and assemblyfacility surfaces. Int. J. Syst. Evol. Microbiol. 56: 1735-1740.
31. Singh R. S. & Singh R. P. 2010. Production of fructooligosaccharides from inulin by endoinulinases and their prebiotic potential. Food Technol. Biotechnol. 48: 435-450.
32. Sitdhipol J., Niwasabutra K., Wannissorn B., Visessanguan W. & Tanasupawat S. 2012. Characterization of alkaline phosphatase producing bacteria isolated from Thai fermented fish products. Int. J. Biol. 4: 44-55.
33. Thompson J. D., Higgins D. G. & Gibson T. J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acid Res. 22: 4673-4680.
34. Yokota A., Yamauchi O. & Tomita F. 1995. Production of inulotriose from inulin by inulin-degrading enzyme from Streptomyces rochei E87. Lett. Appl. Microbiol. 21: 330-333.