Target-induced self-assembly of DNA nanomachine on magnetic particle for multi-amplified biosensing of nucleic acid, protein, and cancer cell

Biosensors and Bioelectronics

Volumn 53, Issue , 2014, Pages 207-213

  Bi, Sai ^a,b   Cui, Yangyang ^b   Dong, Ying ^b   Zhang, Ningbo ^a  

^a LINYI UNIVERSITY   (China)

^b QINGDAO UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

Author keywords

Biosensor; DNA machine; Nicked rolling circle amplification; Tumor markers

Indexed keywords

DNA MACHINES; HORSERADISH PEROXIDASE; ISOTHERMAL CONDITIONS; NICKING ENDONUCLEASE; OPTIMIZED CONDITIONS; ROLLING CIRCLE AMPLIFICATIONS; SUPRAMOLECULAR STRUCTURE; TUMOR MARKERS;

BIOMOLECULES; BIOSENSORS; CELLS; COLORIMETRY; ENZYMES; MAGNETIC BUBBLES; MAGNETIC SEPARATION; SELF ASSEMBLY;

DNA;

2,2' AZINOBIS(3 ETHYLBENZOTHIAZOLINE 6 SULFONIC ACID); APTAMER; DNA; ENDONUCLEASE; HEMIN; HORSERADISH PEROXIDASE; HYDROGEN PEROXIDE; LIGASE; LYSOZYME; MAGNETIC NANOPARTICLE; NUCLEIC ACID; PROTEIN;

ARTICLE; BEACON ASSISTED AMPLIFICATION; BIOSENSOR; CANCER CELL; CATALYSIS; COLORIMETRY; DNA DETERMINATION; GENE AMPLIFICATION; LIMIT OF DETECTION; NICKED ROLLING CIRCLE AMPLIFICATION; OXIDATION; PROCESS OPTIMIZATION;

BIOSENSOR; DNA MACHINE; NICKED ROLLING CIRCLE AMPLIFICATION; TUMOR MARKERS;

APTAMERS, NUCLEOTIDE; BIOSENSING TECHNIQUES; DNA; DNA, CATALYTIC; HUMANS; HYDROGEN PEROXIDE; MAGNETIC PHENOMENA; NEOPLASMS; NUCLEIC ACID AMPLIFICATION TECHNIQUES; NUCLEIC ACIDS; PROTEINS; TUMOR MARKERS, BIOLOGICAL;

EID: 84886261293     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2013.09.066     Document Type: Article

References (53)

1. Beissenhirtz M.K., Willner I. Organic & Biomolecular Chemistry 2006, 4:3392-3401.
2. Bi S., Zhou H., Zhang S. Chemical Science 2010, 1:681-687.
3. Cao A., Zhang C.-Y. Analytical Chemistry 2012, 84:6199-6205.
4. Cheglakov Z., Weizmann Y., Basnar B., Willner I. Organic & Biomolecular Chemistry 2007, 5:223-225.
5. Cheglakov Z., Weizmann Y., Beissenhirtz M.K., Willner I. Chemical Communications 2006, 3205-3207.
6. Cheng Y., Zhang X., Li Z., Jiao X., Wang Y., Zhang Y. Angewandte Chemie International 2006, 48:3268-3272.
7. Dahl F., Banér J., Gullberg M., Mendel-Hartvig M., Landegren U., Nilsson M. Proceedings of the National Academy of Sciences of United States of America 2004, 101:4548-4553.
8. Dong H., Wang C., Xiong Y., Lu H., Ju H., Zhang X. Biosensors and Bioelectronics 2013, 41:348-353.
9. Dong X.-Y., Mi X.-N., Zhang L., Liang T.-M., Xu J.-J., Chen H.-Y. Biosensors and Bioelectronics 2012, 38:337-341.
10. Elbaz J., Moshe M., Shlyahovsky B., Willner I. Chemistry- A European Journal 2009, 15:3411-3418.
11. Famulok M., Hartig J.S., Mayer G. Chemical Reviews 2007, 107:3715-3743.
12. Famulok M., Mayer G. Accounts of Chemical Research 2011, 44:1349-1358.
13. Fang X., Tan W. Accounts of Chemical Research 2010, 43:48-57.
14. Fu R., Jeon K., Jung C., Park H.G. Chemical Communications 2011, 47:9876-9878.
15. Fu R., Li T., Lee S.S., Park H.G. Analytical Chemistry 2011, 83:494-500.
16. Guo Q., Yang X., Wang K., Tan W., Li W., Tang H., Li H. Nucleic Acids Research 2009, 37:e20.
17. Iliuk A.B., Hu L., Tao W.A. Analytical Chemistry 2011, 83:4440-4452.
18. Kirsch J., Siltanen C., Zhou Q., Revzin A., Simonian A. Chemical Society Reviews 2013, 10.1039/C3CS60141B.
19. Mascini M., Palchetti I., Tombelli S. Angewandte Chemie International Edition 2011, 51:1316-1332.
20. Mayer G. Angewandte Chemie International Edition 2009, 48:2672-2689.
21. Murakami T., Sumaoka J., Komiyama M. Nucleic Acids Research 2007, 37:e19.
22. Murakami T., Sumaoka J., Komiyama M. Nucleic Acids Research 2012, 40:e22.
23. Niazov T., Pavlov V., Xiao Y., Gill R., Willner I. Nano Letters 2004, 4:1683-1687.
24. Lee J.B., Peng S., Yang D., Roh Y.H., Funabashi H., Park N., Rice E.J., Chen L., Long R., Wu M., Luo D. Nature Nanotechnology 2012, 7:816-820.
25. Lei J., Ju H. Chemical Society Reviews 2012, 41:2122-2134.
26. Li D., Song S., Fan C. Accounts of Chemical Research 2010, 43:631-641.
27. Li D., Shlyahovsky B., Elbaz J., Willner I. Journal of the American Chemical Society 2007, 129:5804-5805.
28. Li Y., Zeng Y., Ji X., Ren R. Sensors & Actuators, B: Chemical 2012, 171-172:361-366.
29. Ligler F.S. Analytical Chemistry 2009, 81:519-526.
30. Lin C., Zhang Y., Zhou X., Yao B., Fang Q. Biosensors and Bioelectronics 2013, 47:515-519.
31. Lizardi P.M., Huang X., Zhu Z., Bray-Ward P., Thomas D.C., Ward D.C. Nature Genetics 1998, 19:225-232.
32. Pei H., Wan Y., Li J., Hu H., Su Y., Huang Q., Fan C. Chemical Communications 2011, 47:6254-6256.
33. Roloff A., Seitz O. Chemical Science 2013, 4:432-436.
34. Santos-Silva T., Mukhopadhyay A., Seixas J.D., Bernardes G.J.L., Romão C.C., Ramão M.J. Journal of the American Chemical Society 2011, 133:1192-1195.
35. Schaerli Y., Stein V., Spiering M.M., Benkovic S.J., Abell C., Hollfelder F. Nucleic Acids Research 2010, 38:e201.
36. Tan W., Donovan M.J., Jiang J. Chemical Reviews 2013, 113:2842-2862.
37. Tang J., Hou L., Tang D., Zhang B., Zhou J., Chen G. Chemical Communications 2012, 48:8180-8182.
38. Tang L., Liu Y., Ali M.M., Kang D.K., Zhao W., Li J. Analytical Chemistry 2012, 84:4711-4717.
39. Teller C., Willner I. Current Opinion in Biotechnology 2010, 21:376-391.
40. Walker G.T., Fraiser M.S., Schram J.L., Littler M.C., Nadeau J.G., Malinowski D.P. Nucleic Acids Research 1992, 20:1691-1696.
41. Wang X.-P., Yin B.-C., Wang P., Ye B.-C. Biosensors and Bioelectronics 2013, 42:131-135.
42. Weissman S., Lasken, R., 2001. United States Patent. US 6235502 B1.
43. Willner I., Cheglakov Z., Weizmann Y., Sharon E. Analyst 2008, 133:923-927.
44. Willner I., Shlyahovsky B., Willner B., Zayats M. Functional Nucleic Acids for Analytical Applications 2009, 199-252. Springer.
45. Willner I., Shlyahovsky B., Zayats M., Willner B. Chemical Society Reviews 2008, 37:1153-1165.
46. Xu W., Xie X., Li D., Yang Z., Li T., Liu X. Small 2012, 12:1846-1850.
47. Zeng Y.-P., Hu J., Long Y., Zhang C.-Y. Analytical Chemistry 2013, 85:6143-6150.
48. Zhang H., Li F., Dever B., Li X.-F., Le X.C. Chemical Reviews 2013, 113:2812-2841.
49. Zhao W., Ali M.M., Brook M.A., Li Y. Angewandte Chemie International Edition 2008, 47:6330-6337.
50. Zheng A.-X., Li J., Wang J.-R., Song X.-R., Chen G.-N., Yang H.-H. Chemical Communications 2012, 48:3112-3114.
51. Zhou H., Zhang Y.-Y., Liu J., Xu J.-J., Chen H.-Y. Chemical Communications 2013, 49:2246-2248.
52. Zhu G., Yang K., Zhang C.-Y. Biosensors & Bioelectronics 2013, 49:170-175.
53. Zhu G., Ye M., Donovan M.J., Song E., Zhao Z., Tan W. Chemical Communications 2012, 48:10427-10480.