Highly sensitive and selective chemiluminescent imaging for DNA detection by ligation-mediated rolling circle amplified synthesis of DNAzyme

Biosensors and Bioelectronics

Volumn 41, Issue 1, 2013, Pages 348-353

  Dong, Haifeng ^a,b   Wang, Chen ^a   Xiong, Yi ^a   Lu, Huiting ^b   Ju, Huangxian ^a   Zhang, Xueji ^b  

^a NANJING UNIVERSITY   (China)

^b UNIVERSITY OF SCIENCE AND TECHNOLOGY BEIJING   (China)

Author keywords

Biosensors; Chemiluminescent imaging; DNAzyme; Ligase; Rolling circle amplification

Indexed keywords

AMPLIFICATION STRATEGY; BIOANALYSIS; BIOMEDICAL APPLICATIONS; COST-EFFICIENT; DETECTION LIMITS; DNA BIOSENSING; DNA DETECTION; DNAZYME; GENOTYPING; HORSE-RADISH PEROXIDASE; LIGASE; LIGASE REACTION; REPEATED SEQUENCES; ROLLING CIRCLE AMPLIFICATIONS; SIGNAL AMPLIFICATIONS; SINGLE-BASE MISMATCH; TARGET ANALYSIS;

BIOSENSORS; CHEMILUMINESCENCE; DNA; MEDICAL APPLICATIONS; SIGNAL PROCESSING; SYNTHESIS (CHEMICAL);

DNA SEQUENCES;

DEOXYRIBOZYME; HYDROGEN PEROXIDE; LIGASE; LUMINOL; DNA; DNAZYME; ENZYME; HORSERADISH PEROXIDASE; PEROXIDASE; UNCLASSIFIED DRUG;

ALLELE; ARTICLE; BASE MISPAIRING; BIOCHEMISTRY; CHEMOLUMINESCENCE; CONCENTRATION (PARAMETERS); COST EFFECTIVENESS ANALYSIS; DNA DETERMINATION; DNA HYBRIDIZATION; DNA SEQUENCE; ENZYME IMMOBILIZATION; ENZYME MECHANISM; GENE AMPLIFICATION; GENE TARGETING; GENETIC ANALYSIS; GENOTYPING TECHNIQUE; LIMIT OF DETECTION; MOLECULAR IMAGING; PROCESS OPTIMIZATION; REACTION TIME; ROLLING CIRCLE AMPLIFICATION; SENSITIVITY AND SPECIFICITY; CHEMISTRY; DNA MICROARRAY; EQUIPMENT; EQUIPMENT DESIGN; EQUIPMENT FAILURE; GENETIC PROCEDURES; GENETICS; LUMINESCENCE; METHODOLOGY; NUCLEIC ACID AMPLIFICATION; REPRODUCIBILITY; BIOSENSOR; ENZYME SYNTHESIS; GENOTYPE; LIGATION;

ARMORACIA RUSTICANA;

BIOSENSING TECHNIQUES; DNA; DNA, CATALYTIC; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; LUMINESCENT MEASUREMENTS; NUCLEIC ACID AMPLIFICATION TECHNIQUES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY;

EID: 84870809878     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2012.08.050     Document Type: Article

References (51)

1. Abe H., Kool E.T. Journal of the American Chemical Society 2004, 126:13980-13986.
2. Bi S., Li L., Zhang S.S. Analytical Chemistry 2010, 82:9447-9454.
3. Bi S., Zhang J.L., Zhang S.S. Chemical Communications 2010, 46:5509-5511.
4. Cai H., Xu Y., Zhu N., He P., Fang Y. Analyst 2002, 127:803-808.
5. Cheglakov Z., Weizmann Y., Basnar B., Willner I. Organic and Biomolecular Chemistry 2007, 5:223-225.
6. Chen Y., Shortreed M.R., Peelen D., Lu M., Smith L.M. Journal of the American Chemical Society 2007, 129:4154-4155.
7. Cheng Y.Q., Zhang X., Li Z.P., Jiao X.X., Wang Y.C., Zhang Y.L. Angewandte Chemie-International Edition 2009, 48:3268-3272.
8. Daubendiek S.L., Ryan K., Kool E.T. Journal of the American Chemical Society 1995, 117:7818-7819.
9. Dong H.F., Gao W.C., Yan F., Ji H.X., Ju H.X. Analytical Chemistry 2010, 82:5511-5517.
10. Dong H.F., Yan F., Ji H.X., Wong D.K.Y., Ju H.X. Advanced Functional Materials 2010, 20:1173-1179.
11. Dong X.C., Lau C.M., Lohani A., Mhaisalkar S.G., Kasim J., Shen Z.X., Ho X.N., Rogers J.A., Li L.J. Advanced Materials 2008, 20:2389-2393.
12. Duan X., Li Z., He F., Wang S. Journal of the American Chemical Society 2007, 129:4154-4155.
13. Fire A., Xu S. Proceedings of the National Academy of Sciences of the United States of America 1995, 92:4641-4645.
14. Gao W.C., Dong H.F., Lei J.P., Ji H.X., Ju H.X. Chemical Communications 2011, 47:5220-5222.
15. Gorodetsky A.A., Buzzeo M.C., Barton J.K. Bioconjugate Chemistry 2008, 19:2285-2296.
16. Ju H.X., Ye Y.K., Zhao J.H., Zhu Y.L. Analytical Biochemistry 2003, 313:255-261.
17. Kim S., Misra A. Annual Review of Biomedical Engineering 2007, 9:289-320.
18. Kirk B.W., Feinsod M., Favis R., Kliman R.M., Barany F. Nucleic Acids Research 2002, 30:3295-3311.
19. Kong H., Liu D., Zhang S.C., Zhang X.R. Analytical Chemistry 2011, 83:1867-1870.
20. Li J.S., Deng T., Chu X., Yang R.H., Jiang J.H., Shen G.L., Yu R.Q. Journal of the American Chemical Society 2009, 131:2478-2480.
21. Li J.S., Deng T., Chu X., Yang R.H., Jiang J.H., Shen G.L., Yu R.Q. Analytical Chemistry 2010, 82:2811-2816.
22. Li Y., Wark A.W., Lee H.J., Corn R.M. Analytical Chemistry 2006, 78:3158-3164.
23. Li T., Wang E.K., Dong S.J. Chemical Communications 2008, 43:5520-5522.
24. Liu D., Daubendiek S.L., Zillman M.A., Ryan K., Kool E.T. Journal of the American Chemical Society 1996, 118:1587-1594.
25. Liu G., Wan Y., Gau V., Zhang J., Wang L.H., Song S.P., Fan C.H. Journal of the American Chemical Society 2008, 130:6820-6825.
26. Lizardi P.M., Huang X., Zhu Z., Bray-Ward P., Thomas D.C., Ward D.C. Nature Genetics 1998, 19:225-232.
27. Lockett M.R., Shortreed M.R., Smith L.M. Analytical Chemistry 2007, 79:6031-6036.
28. Luo M., Chen X., Zhou G.H., Xiang X., Chen L., Ji X.H., He Z.K. Chemical Communications 2012, 48:1126-1128.
29. Magliulo M., Simoni P., Guardigli M., Michelini E., Luciani M., Lelli R., Roda A. Journal of Agricultural and Food Chemistry 2007, 55:4933-4939.
30. Mehrgardi M.A., Daneshtalab R. Journal of Electroanalytical Chemistry 2011, 650:214-218.
31. Michael C.S., Andreas M Angewandte Chemie-International Edition 2005, 44:7842-7849.
32. Munge B., Liu G.D., Collins G., Wang J. Analytical Chemistry 2005, 77:4662-4666.
33. Ogasawara S., Fujimoto K. Angewandte Chemie-International Edition 2006, 45:4512-4515.
34. Pavlov V., Xiao Y., Gill R., Dishon A., Kotler M., Willner I. Analytical Chemistry 2004, 76:2152-2156.
35. Polsky R., Gill R., Kaganovsky L., Willner I. Analytical Chemistry 2006, 78:2268-2271.
36. Sachidanandam R., Weissman D., Schmidt S.C., Kakol J.M., Stein L.D., Marth G., Sherry S., Mullikin J.C., Mortimore B.J., Willey D.L. Nature 2001, 409:928-933.
37. Sassolas A., Leca-Bouvier B.D., Blum L.J. Chemical Reviews 2008, 108:109-139.
38. Schweitzer B., Wiltshire S., Lambert J., Malley O., Kukanskis S., Zhu K., Kingsmore Z., Lizardi S.F., Ward, D.C.P.M. Proceedings of the National Academy of Sciences of the United States of America 2000, 97:10113-10119.
39. Song S.P., Liang Z.Q., Zhang J., Wang L.H., Li G.X., Fan C.H. Angewandte Chemie-International Edition 2009, 48:8670-8674.
40. Steemers F.J., Chang W., Lee G., Barker D.L., Shen R., Gunderson K.L. Nature Methods 2006, 3:31-33.
41. Syvanen A.C. Nature Reviews Genetics 2001, 2:930-942.
42. Taton T.A., Mirkin C.A., Letsinger R.L. Science 2000, 289:1757-1760.
43. Tian Y., He Y., Mao C.D. Chembiochem: A European Journal of Chemical Biology 2006, 7:1862-1864.
44. Wang H.Q., Liu W.Y., Wu Z., Tang L.J., Xu X.M., Yu R.Q., Jiang J.H. Analytical Chemistry 2011, 83:1883-1889.
45. Wang J.X., Zhu X., Tu Q.Y., Guo Q., Zarui C.S., Momand J.X., Sun Z., Zhou F.M. Analytical Chemistry 2008, 80:769-774.
46. Xiao Y., Qu X., Plaxco K.W., Heeger A.J. Journal of the American Chemical Society 2007, 129:11896-11897.
47. Yang M.H., Kostov Y., Bruck H.A., Rasooly A. Analytical Chemistry 2008, 80:8532-8537.
48. Ye Y.K., Zhao J.H., Yan F., Zhu Y.L., Ju H.X. Biosensors and Bioelectronics 2003, 18:1501-1508.
49. Zhao W.A., Ali M.M., Brook M.A., Li Y.F. Angewandte Chemie-International Edition 2008, 47:6330-6337.
50. Zhang J.H., Chung T.D.Y., Oldenburg K.R. Journal of Biomolecular Screening 1999, 4:67-73.
51. Zong C., Wu J., Wang C., Ju H.X., Yan F. Analytical Chemistry 2012, 84:2410-2415.