-
1
-
-
0032925848
-
Positional dependence, cliques, and predictive motifs in the bHLH protein domain
-
W. Atchlcy, W. Terhallc, and A. Dress. Positional Dependence, Cliques, and Predictive Motifs in the bHLH Protein Domain. Journal of Molecular Evolution, Vol. 48:501-516, 1999.
-
(1999)
Journal of Molecular Evolution
, vol.48
, pp. 501-516
-
-
Atchlcy, W.1
Terhallc, W.2
Dress, A.3
-
2
-
-
15944375458
-
PDZBasc: A protein-protein interaction database for PDZ-domains
-
T. Beuming, L. Skrabanek, M. Niv, P. Mukherjee, and H. Weinstoin. PDZBasc: A Protein-Protein Interaction Database for PDZ-Domains. Bioinformatics, Vol. 21(6):827-828, 2005.
-
(2005)
Bioinformatics
, vol.21
, Issue.6
, pp. 827-828
-
-
Beuming, T.1
Skrabanek, L.2
Niv, M.3
Mukherjee, P.4
Weinstoin, H.5
-
4
-
-
3543089710
-
A perturbation-based method for calculating explicit likelihood of evolutionary co-variance in multiple sequence alignments
-
J. Dekkcr, A. Fodor, R. Aldriclr, and G. Yollen. A Perturbation-Based Method for Calculating Explicit Likelihood of Evolutionary Co-Variance in Multiple Sequence Alignments. Bioinformatics, Vol. 20(10):1565-1572, 2004.
-
(2004)
Bioinformatics
, vol.20
, Issue.10
, pp. 1565-1572
-
-
Dekkcr, J.1
Fodor, A.2
Aldriclr, R.3
Yollen, G.4
-
5
-
-
15944403709
-
Model selection for gaussian concentration graphs
-
M. Drton and M. Perlman. Model Selection for Gaussian Concentration Graphs. Biom.etrika, Vol. 91(3):591-602, 2004.
-
(2004)
Biom. Etrika
, vol.91
, Issue.3
, pp. 591-602
-
-
Drton, M.1
Perlman, M.2
-
6
-
-
3042842115
-
Influence of conservation on calculations of amino acid covariance in multiple sequence alignments
-
A. Fodor and R. Aldriclr. Influence of Conservation on Calculations of Amino Acid Covariance in Multiple Sequence Alignments. Proteins: Structure, Function, and Bioinformatics, Vol. 56:211-221, 2004.
-
(2004)
Proteins: Structure, Function, and Bioinformatics
, vol.56
, pp. 211-221
-
-
Fodor, A.1
Aldriclr, R.2
-
7
-
-
2442498470
-
On evolutionary conservation of thermodynamic coupling in proteins
-
Apr
-
A. Fodor and R. Aldrich. On Evolutionary Conservation of Thermodynamic Coupling in Proteins. Journal of Biological Chemistry, Vol. 279(18) :19046-19050, Apr 2004.
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.18
, pp. 19046-19050
-
-
Fodor, A.1
Aldrich, R.2
-
9
-
-
0033435204
-
Detection of protein fold similarity based on correlation of amino acid properties
-
Dec
-
I. Grigoriev and S.-H. Kim. Detection of Protein Fold Similarity Based on Correlation of Amino Acid Properties. Proceedings of the National Academy of Sciences, USA, Vol. 96(25):14318-14323, Dec 1999.
-
(1999)
Proceedings of the National Academy of Sciences, USA
, vol.96
, Issue.25
, pp. 14318-14323
-
-
Grigoriev, I.1
Kim, S.-H.2
-
10
-
-
0034740693
-
Mechanism and role of PDZ domains in signaling complex assembly
-
B. Harris and W. Lim. Mechanism and Role of PDZ Domains in Signaling Complex Assembly. Journal of Cell Science, Vol. 114:3219-3231, 2001.
-
(2001)
Journal of Cell Science
, vol.114
, pp. 3219-3231
-
-
Harris, B.1
Lim, W.2
-
11
-
-
0030322783
-
Double-mutant cycles: A powerful tool for analyzing protein structure and function
-
A. Horovitz. Double-Mutant Cycles: A Powerful Tool for Analyzing Protein Structure and Function. Fold. Dcs., Vol. 1:R121-R126, 1996.
-
(1996)
Fold. Dcs.
, vol.1
-
-
Horovitz, A.1
-
13
-
-
0037155199
-
PDZ domains: Structural modules for protein complex assembly
-
Feb
-
A. Hung and M. Sheng. PDZ Domains: Structural Modules for Protein Complex Assembly. Journal of Biological Chemistry, Vol. 277(8) :5699-5702, Feb 2002.
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.8
, pp. 5699-5702
-
-
Hung, A.1
Sheng, M.2
-
15
-
-
0036721218
-
Mapping pathways of allosteric communication in GroEL by analysis of correlated mutations
-
I. Kass and A. Horovitz. Mapping Pathways of Allosteric Communication in GroEL by Analysis of Correlated Mutations. Proteins: Structure. Function, and Genetics, Vol. 48:611-617, 2002.
-
(2002)
Proteins: Structure. Function, and Genetics
, vol.48
, pp. 611-617
-
-
Kass, I.1
Horovitz, A.2
-
16
-
-
0027297096
-
Covariation of mutations in the V3 Loop of HIV type 1 envelope protein: An information theoretic analysis
-
Aug
-
B. Korber, R. Farber, D. Wolpert, and A. Lapedes. Covariation of Mutations in the V3 Loop of HIV Type 1 Envelope Protein: An Information Theoretic Analysis. Proceedings of the National Academy of Sciences, USA, Vol. 90:7176-7180, Aug 1993.
-
(1993)
Proceedings of the National Academy of Sciences, USA
, vol.90
, pp. 7176-7180
-
-
Korber, B.1
Farber, R.2
Wolpert, D.3
Lapedes, A.4
-
18
-
-
0033536602
-
Evolutionarily conserved pathways of energetic connectivity in protein families
-
Oct
-
S. Lockless and R. Ranganathan. Evolutionarily Conserved Pathways of Energetic Connectivity in Protein Families. Science, Vol. 286(5438):295-299, Oct 1999.
-
(1999)
Science
, vol.286
, Issue.5438
, pp. 295-299
-
-
Lockless, S.1
Ranganathan, R.2
-
20
-
-
0141482410
-
Common structural cliques: A tool for protein structure and function analysis
-
M. Milik, S. Szalma, and K. Olszewski. Common Structural Cliques: A Tool for Protein Structure and Function Analysis. Protein Engineering, Vol. 16(8):542-552, 2003.
-
(2003)
Protein Engineering
, vol.16
, Issue.8
, pp. 542-552
-
-
Milik, M.1
Szalma, S.2
Olszewski, K.3
-
21
-
-
0033550256
-
Effective use of sequence correlation and conservation in fold recognition
-
O. Olmea, B. Rost, and A. Valencia. Effective Use of Sequence Correlation and Conservation in Fold Recognition. Journal of Molecular Biology, Vol. 295:1221-1239, 1999.
-
(1999)
Journal of Molecular Biology
, vol.295
, pp. 1221-1239
-
-
Olmea, O.1
Rost, B.2
Valencia, A.3
-
23
-
-
0027248706
-
Engineering multiple properties of a protein by combinatorial mutagenesis
-
Sep
-
W. Sandberg and T. Terwilliger. Engineering Multiple Properties of a Protein by Combinatorial Mutagenesis. Proceedings of the National Academy of Sciences, USA, Vol. 90(18):8367-8371, Sep 1993.
-
(1993)
Proceedings of the National Academy of Sciences, USA
, vol.90
, Issue.18
, pp. 8367-8371
-
-
Sandberg, W.1
Terwilliger, T.2
-
24
-
-
0042767572
-
Using multiple sequence correlation analysis to characterize functionally important protein regions
-
M. Saraf, G. Moore, and C. Maranas. Using Multiple Sequence Correlation Analysis to Characterize Functionally Important Protein Regions. Protein Engineering, Vol. 16(6):397-406, 2003.
-
(2003)
Protein Engineering
, vol.16
, Issue.6
, pp. 397-406
-
-
Saraf, M.1
Moore, G.2
Maranas, C.3
-
25
-
-
0038675537
-
Conserved residue clustering and protein structure prediction
-
O. Schueler-Furman and D. Baker. Conserved Residue Clustering and Protein Structure Prediction. Proteins: Structure, Function, and Genetics, Vol. -52:225-235, 2003.
-
(2003)
Proteins: Structure, Function, and Genetics
, vol.52
, pp. 225-235
-
-
Schueler-Furman, O.1
Baker, D.2
-
26
-
-
0037219686
-
Evolutionary conserved networks of residues mediate allosteric communication in proteins
-
Jan
-
G. Suel, S. Lockless, M. Wall, and R. Ranganathan. Evolutionary Conserved Networks of Residues Mediate Allosteric Communication in Proteins. Nature Structural Biology, Vol. 10:59-69, Jan 2003.
-
(2003)
Nature Structural Biology
, vol.10
, pp. 59-69
-
-
Suel, G.1
Lockless, S.2
Wall, M.3
Ranganathan, R.4
-
28
-
-
0036289574
-
Protein building blocks preserved by recombination
-
Jul
-
C. Voigt, C. Martinez, Z.-G. Wang, S. Mayo, and F. Arnold. Protein Building Blocks Preserved by Recombination. Nature Structural Biology, Vol. 9(7):553-558, Jul 2002.
-
(2002)
Nature Structural Biology
, vol.9
, Issue.7
, pp. 553-558
-
-
Voigt, C.1
Martinez, C.2
Wang, Z.-G.3
Mayo, S.4
Arnold, F.5
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