-
2
-
-
77952499429
-
-
Carothers J.M., Goler J.A., Kapoor Y., Lara L., Keasling J.D. Nucleic Acids Res. 2010, 38:2736-2747.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 2736-2747
-
-
Carothers, J.M.1
Goler, J.A.2
Kapoor, Y.3
Lara, L.4
Keasling, J.D.5
-
3
-
-
77952700860
-
-
Lee M.-K., Gal M., Frydman L., Varani G. Proc. Natl. Acad. Sci. 2010, 107:9192-9197.
-
(2010)
Proc. Natl. Acad. Sci.
, vol.107
, pp. 9192-9197
-
-
Lee, M.-K.1
Gal, M.2
Frydman, L.3
Varani, G.4
-
4
-
-
31944446215
-
-
Zhang Q., Sun X., Watt E.D., Al-Hashimi H.M. Science 2006, 311:653-656.
-
(2006)
Science
, vol.311
, pp. 653-656
-
-
Zhang, Q.1
Sun, X.2
Watt, E.D.3
Al-Hashimi, H.M.4
-
5
-
-
37549017736
-
-
Zhang Q., Stelzer A.C., Fisher C.K., Al-Hashimi H.M. Nature 2007, 450:1263-1267.
-
(2007)
Nature
, vol.450
, pp. 1263-1267
-
-
Zhang, Q.1
Stelzer, A.C.2
Fisher, C.K.3
Al-Hashimi, H.M.4
-
6
-
-
84870289330
-
-
Dethoff E.A., Petzold K., Chugh J., Casiano-Negroni A., Al-Hashimi H.M. Nature 2012, 491:724-728.
-
(2012)
Nature
, vol.491
, pp. 724-728
-
-
Dethoff, E.A.1
Petzold, K.2
Chugh, J.3
Casiano-Negroni, A.4
Al-Hashimi, H.M.5
-
8
-
-
58549109608
-
-
Deigan K.E., Li T.W., Mathews D.H., Weeks K.M. Proc. Natl. Acad. Sci. USA 2009, 106:97-102.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 97-102
-
-
Deigan, K.E.1
Li, T.W.2
Mathews, D.H.3
Weeks, K.M.4
-
9
-
-
16244412610
-
-
Merino E.J., Wilkinson K.A., Coughlan J.L., Weeks K.M. J. Am. Chem. Soc. 2005, 127:4223-4231.
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 4223-4231
-
-
Merino, E.J.1
Wilkinson, K.A.2
Coughlan, J.L.3
Weeks, K.M.4
-
10
-
-
0024356301
-
-
Wiseman T., Williston S., Brandts J.F., Lin L.N. Anal. Biochem. 1989, 179:131-137.
-
(1989)
Anal. Biochem.
, vol.179
, pp. 131-137
-
-
Wiseman, T.1
Williston, S.2
Brandts, J.F.3
Lin, L.N.4
-
12
-
-
82455192426
-
-
Kang K., Sachan A., Nilsen-Hamilton M., Shrotriya P. Langmuir 2011, 27:14696-14702.
-
(2011)
Langmuir
, vol.27
, pp. 14696-14702
-
-
Kang, K.1
Sachan, A.2
Nilsen-Hamilton, M.3
Shrotriya, P.4
-
13
-
-
0029347016
-
-
Wallis M.G., von Ahsen U., Schroeder R., Famulok M. Chem. Biol. 1995, 2:543-552.
-
(1995)
Chem. Biol.
, vol.2
, pp. 543-552
-
-
Wallis, M.G.1
von Ahsen, U.2
Schroeder, R.3
Famulok, M.4
-
15
-
-
0000812659
-
-
Sowers L.C., Fazakerley G.V., Eritja R., Kaplan B.E., Goodman M.F. Proc. Natl. Acad. Sci. 1986, 83:5434-5438.
-
(1986)
Proc. Natl. Acad. Sci.
, vol.83
, pp. 5434-5438
-
-
Sowers, L.C.1
Fazakerley, G.V.2
Eritja, R.3
Kaplan, B.E.4
Goodman, M.F.5
-
16
-
-
34547572806
-
-
Stampfl S., Lempradl A., Koehler G., Schroeder R. ChemBioChem 2007, 8:1137-1145.
-
(2007)
ChemBioChem
, vol.8
, pp. 1137-1145
-
-
Stampfl, S.1
Lempradl, A.2
Koehler, G.3
Schroeder, R.4
-
17
-
-
80053542128
-
-
Soulière M.F., Haller A., Rieder R., Micura R. J. Am. Chem. Soc. 2011, 133:16161-16167.
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 16161-16167
-
-
Soulière, M.F.1
Haller, A.2
Rieder, R.3
Micura, R.4
-
18
-
-
0033565449
-
-
Jiang L., Majumdar A., Hu W., Jaishree T.J., Xu W., Patel D.J. Struct. Fold. Des. 1999, 7:817-827.
-
(1999)
Struct. Fold. Des.
, vol.7
, pp. 817-827
-
-
Jiang, L.1
Majumdar, A.2
Hu, W.3
Jaishree, T.J.4
Xu, W.5
Patel, D.J.6
-
20
-
-
0034833710
-
-
Boger D.L., Fink B.E., Brunette S.R., Tse W.C., Hedrick M.P. J. Am. Chem. Soc. 2001, 123:5878-5891.
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 5878-5891
-
-
Boger, D.L.1
Fink, B.E.2
Brunette, S.R.3
Tse, W.C.4
Hedrick, M.P.5
-
21
-
-
27344436659
-
-
Phillips J.C., Braun R., Wang W., Gumbart J., Tajkhorshid E., Villa E., Chipot C., Skeel R.D., Kale L., Schulten K. J. Comput. Chem. 2005, 26:1781-1802.
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
Chipot, C.7
Skeel, R.D.8
Kale, L.9
Schulten, K.10
-
22
-
-
46249092554
-
-
Hess B., Kutzner C., van der Spoel D., Lindahl E. J. Chem. Theory Comput. 2008, 4:435-447.
-
(2008)
J. Chem. Theory Comput.
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
van der Spoel, D.3
Lindahl, E.4
-
23
-
-
67650500988
-
-
Brooks B.R., Brooks C.L., Mackerell A.D., Nilsson L., Petrella R.J., Roux B., Won Y., Archontis G., Bartels C., Boresch S., Caflisch A., Caves L., Cui Q., Dinner A.R., Feig M., Fischer S., Gao J., Hodoscek M., Im W., Kuczera K., Lazaridis T., Ma J., Ovchinnikov V., Paci E., Pastor R.W., Post C.B., Pu J.Z., Schaefer M., Tidor B., Venable R.M., Woodcock H.L., Wu X., Yang W., York D.M., Karplus M. J. Comput. Chem. 2009, 30:1545-1614.
-
(2009)
J. Comput. Chem.
, vol.30
, pp. 1545-1614
-
-
Brooks, B.R.1
Brooks, C.L.2
Mackerell, A.D.3
Nilsson, L.4
Petrella, R.J.5
Roux, B.6
Won, Y.7
Archontis, G.8
Bartels, C.9
Boresch, S.10
Caflisch, A.11
Caves, L.12
Cui, Q.13
Dinner, A.R.14
Feig, M.15
Fischer, S.16
Gao, J.17
Hodoscek, M.18
Im, W.19
Kuczera, K.20
Lazaridis, T.21
Ma, J.22
Ovchinnikov, V.23
Paci, E.24
Pastor, R.W.25
Post, C.B.26
Pu, J.Z.27
Schaefer, M.28
Tidor, B.29
Venable, R.M.30
Woodcock, H.L.31
Wu, X.32
Yang, W.33
York, D.M.34
Karplus, M.35
more..
-
24
-
-
23444454552
-
-
Case D.A., Cheatham T.E., Darden T., Gohlke H., Luo R., Merz K.M., Onufriev A., Simmerling C., Wang B., Woods R.J. J. Comput. Chem. 2005, 26:1668-1688.
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1668-1688
-
-
Case, D.A.1
Cheatham, T.E.2
Darden, T.3
Gohlke, H.4
Luo, R.5
Merz, K.M.6
Onufriev, A.7
Simmerling, C.8
Wang, B.9
Woods, R.J.10
-
27
-
-
0004016501
-
-
Jorgensen W.L., Chandrasekhar J., Madura J.D., Impey R.W., Klein M.L. J. Chem. Phys. 1983, 79:926-935.
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
28
-
-
79958841703
-
-
Zoete V., Cuendet M.A., Grosdidier A., Michielin O. J. Comput. Chem. 2011, 32:2359-2368.
-
(2011)
J. Comput. Chem.
, vol.32
, pp. 2359-2368
-
-
Zoete, V.1
Cuendet, M.A.2
Grosdidier, A.3
Michielin, O.4
-
29
-
-
33748538349
-
-
Wang J., Wang W., Kollman P.A., Case D.A. J. Mol. Graph. Model. 2006, 25:247-260.
-
(2006)
J. Mol. Graph. Model.
, vol.25
, pp. 247-260
-
-
Wang, J.1
Wang, W.2
Kollman, P.A.3
Case, D.A.4
-
30
-
-
84893169025
-
-
Schmidt M.W., Baldridge K.K., Boatz J.A., Elbert S.T., Gordon M.S., Jensen J.H., Koseki S., Matsunaga N., Nguyen K.A., Su S.J., Windus T.L., Dupuis M., Montgomery J.A. J. Comput. Chem. 1993, 14:1347-1363.
-
(1993)
J. Comput. Chem.
, vol.14
, pp. 1347-1363
-
-
Schmidt, M.W.1
Baldridge, K.K.2
Boatz, J.A.3
Elbert, S.T.4
Gordon, M.S.5
Jensen, J.H.6
Koseki, S.7
Matsunaga, N.8
Nguyen, K.A.9
Su, S.J.10
Windus, T.L.11
Dupuis, M.12
Montgomery, J.A.13
-
31
-
-
84883147510
-
Ions in molecular dynamics simulations of RNA systems
-
Springer-Verlag, Berlin, Heidelberg, N. Leontis, E. Westhof (Eds.)
-
Auffinger P. Ions in molecular dynamics simulations of RNA systems. RNA 3D Structure Analysis and Prediction 2012, 299-318. Springer-Verlag, Berlin, Heidelberg. N. Leontis, E. Westhof (Eds.).
-
(2012)
RNA 3D Structure Analysis and Prediction
, pp. 299-318
-
-
Auffinger, P.1
-
34
-
-
77955817276
-
-
DePaul A.J., Thompson E.J., Patel S.S., Haldeman K., Sorin E.J. Nucleic Acids Res. 2010, 38:4856-4867.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 4856-4867
-
-
DePaul, A.J.1
Thompson, E.J.2
Patel, S.S.3
Haldeman, K.4
Sorin, E.J.5
-
35
-
-
70350074288
-
-
Wang T., Hoy J.A., Lamm M.H., Nilsen-Hamilton M. J. Am. Chem. Soc. 2009, 131:14747-14755.
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 14747-14755
-
-
Wang, T.1
Hoy, J.A.2
Lamm, M.H.3
Nilsen-Hamilton, M.4
-
38
-
-
38049004429
-
-
Weigand J.E., Sanchez M., Gunnesch E.B., Zeiher S., Schroeder R., Suess B. RNA 2008, 14:89-97.
-
(2008)
RNA
, vol.14
, pp. 89-97
-
-
Weigand, J.E.1
Sanchez, M.2
Gunnesch, E.B.3
Zeiher, S.4
Schroeder, R.5
Suess, B.6
-
39
-
-
0347785487
-
-
Nguyen D.H., DeFina S.C., Fink W.H., Dieckmann T. J. Am. Chem. Soc. 2002, 124:15081-15084.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 15081-15084
-
-
Nguyen, D.H.1
DeFina, S.C.2
Fink, W.H.3
Dieckmann, T.4
|