Plant Subtilisins

Handbook of Proteolytic Enzymes

Volumn 3, Issue , 2013, Pages 3247-3254

  Schaller, Andreas ^a  

^a UNIVERSITY OF HOHENHEIM   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84884830125     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1016/B978-0-12-382219-2.00717-1     Document Type: Chapter

References (71)

1. Smith E.L., Markland F.S., Kasper C.B., DeLange R.J., Landon M., Evans W.H. The complete amino acid sequence of two types of subtilisin, BPN' and Carlsberg. J. Biol. Chem. 1966, 241:5974-5976.
2. Rawlings N.D., Morton F.R., Kok C.Y., Kong J., Barrett A.J. MEROPS: the peptidase database. Nucleic Acids Res. 2008, 36:D320-325.
3. Siezen R.J., Leunissen J.A. Subtilases: the superfamily of subtilisin-like serine proteases. Protein Sci. 1997, 6:501-523.
4. Kaneda M., Tominaga N. Isolation and characterization of a proteinase from the sarcocarp of melon fruit. J. Biochem. 1975, 78:1287-1296.
5. Yamagata H., Masuzawa T., Nagaoka Y., Ohnishi T., Iwasaki T. Cucumisin, a serine protease from melon fruits, shares structural homology with subtilisin and is generated from a large precursor. J. Biol. Chem. 1994, 269:32725-32731.
6. Granell A., Bellés J.M., Conejero V. Induction of pathogenesis-related proteins in tomato by citrus exocortis viroid, silver ion and ethephon. Physiol. Mol. Plant Pathol. 1987, 31:83-90.
7. Fischer W., Christ U., Baumgartner M., Erismann K.H., Mösinger E. Pathogenesis-related proteins from tomato: II. Biochemical and immunological characterization. Physiol. Mol. Plant Pathol. 1989, 35:67-83.
8. Christ U., Mösinger E. Pathogenesis-related proteins of tomato: I. Induction by Phytophthora infestans and other biotic and abiotic inducers and correlations with resistance. Physiol. Mol. Plant Pathol. 1989, 35:53-65.
9. Tornero P., Conejero V., Vera P. Primary structure and expression of a pathogen-induced protease (PR-P69) in tomato plants: Similarity of functional domains to subtilisin-like endoproteases. Proc. Natl. Acad. Sci. USA 1996, 93:6332-6337.
10. Tornero P., Conejero V., Vera P. Identification of a new pathogen-induced member of the subtilisin-like processing protease family from plants. J. Biol. Chem. 1997, 272:14412-14419.
11. Jordá L., Coego A., Conejero V., Vera P. A genomic cluster containing four differentially regulated subtilisin-like processing protease genes in tomato plants. J. Biol. Chem. 1999, 274:2360-2365.
12. Jorda L., Conejero V., Vera P. Characterization of P69E and P69F, two differentially regulated genes encoding new members of the subtilisin-like proteinase family from tomato plants. Plant Physiol. 2000, 122:67-74.
13. Meichtry J., Amrhein N., Schaller A. ). Characterization of the subtilase gene family in tomato (Lycopersicon esculentum Mill.). Plant Mol. Biol. 1999, 39:749-760.
14. Rautengarten C., Steinhauser D., Büssis D., Stintzi A., Schaller A., Kopka J., Altmann T. Inferring hypotheses on functional relationships of genes: Analysis of the Arabidopsis thaliana subtilase gene family. PLoS Comput. Biol. 2005, 1:e40.
15. Tripathi L., Sowdhamini R. Cross genome comparisons of serine proteases in Arabidopsis and rice. BMC Genomics 2006, 7:200.
16. Schaller A., Stintzi A., Graff L. Subtilases - versatile tools for protein turnover, plant development, and interactions with the environment. Physiol. Plant. 2012, 145, 52-66.
17. Uchikoba T., Yonezawa H., Kaneda M. Cleavage specificity of cucumisin, a plant serine protease. J. Biochem. 1995, 117:1126-1130.
18. Arima K., Yonezawa H., Uchikoba T., Shimada M., Kaneda M. Cleavage specificity of cucumisin, a serine protease, with synthetic substrates. Phytochemistry 2000, 54:451-454.
19. Yonezawa H., Kaizuka H., Uchikoba T., Arima K., Kaneda M. Substrate specificity of cucumisin on synthetic peptides. Biosci. Biotechnol. Biochem. 2000, 64:2104-2108.
20. Terp N., Thomsen K.K., Svendsen I., Davy A., Simpson D.J. Purification and characterization of hordilisin, a subtilisin-like serine endoprotease from barley. J. Plant Physiol. 2000, 156:468-476.
21. Bogacheva A.M., Rudenskaya G.N., Preusser A., Tchikileva I.O., Dunaevsky Y.E., Golovkin B.N., Stepanov V.M. A new subtilisin-like proteinase from roots of the dandelion Taraxacum officinale Webb S. L. Biochemistry (Mosc) 1999, 64:1030-1037.
22. Rudenskaya G.N., Bogdanova E.A., Revina L.P., Golovkin B.N., Stepanov V.M. Macluralisin - a serine proteinase from fruits of Maclura pomifera (Raf.) Schneid. Planta 1995, 196:174-179.
23. Hamilton J.M.U., Simpson D.J., Hyman S.C., Ndimba B.K., Slabas A.R. Ara12 subtilisin-like protease from Arabidopsis thaliana: purification, substrate specificity and tissue localization. Biochem. J. 2003, 370:57-67.
24. Fontanini D., Jones B.L. SEP-1 - a subtilisin-like serine endopeptidase from germinated seeds of Hordeum vulgare L. cv. Morex. Planta 2002, 215:885-893.
25. Janzik I., Macheroux P., Amrhein N., Schaller A. LeSBT1, a subtilase from tomato plants. Overexpression in insect cells, purification and characterization. J. Biol. Chem. 2000, 275:5193-5199.
26. Coffeen W.C., Wolpert T.J. Purification and characterization of serine proteases that exhibit caspase-like activity and are associated with programmed cell death in Avena sativa. Plant Cell 2004, 16:857-873.
27. Chichkova N.V., Shaw J., Galiullina R.A., Drury G.E., Tuzhikov A.I., Kim S.H., Kalkum M., Hong T.B., Gorshkova E.N., Torrance L., Vartapetian A.B., Taliansky M. Phytaspase, a relocalisable cell death promoting plant protease with caspase specificity. EMBO J. 2010, 29:1149-1161.
28. Qi X., Wilson K.A., Tan-Wilson A.L. Characterization of the major protease involved in the soybean beta-conglycinin storage protein mobilization. Plant Physiol. 1992, 99:725-733.
29. Boyd P.M., Barnaby N., Tan-Wilson A., Wilson K.A. Cleavage specificity of the subtilisin-like protease C1 from soybean. Biochim. Biophys. Acta 2002, 1596:269-282.
30. Srivastava R., Liu J.X., Howell S.H. Proteolytic processing of a precursor protein for a growth-promoting peptide by a subtilisin serine protease in Arabidopsis. Plant J. 2008, 56:219-227.
31. Srivastava R., Liu J.-X., Guo H., Yin Y., Howell S.H. Regulation and processing of a plant peptide hormone, AtRALF23, in Arabidopsis. Plant J. 2009, 59:930-939.
32. Liu J.-X., Srivastava R., Che P., Howell S.H. An endoplasmic reticulum stress response in Arabidopsis is mediated by proteolytic processing and nuclear relocation of a membrane-associated transcription factor, bZIP28. Plant Cell 2007, 19:4111-4119.
33. Popovic T., Puizdar V., Brzin J. A novel subtilase from common bean leaves. FEBS Lett. 2002, 530:163-168.
34. Barr P.J. Mammalian subtilisins: the long-sought dibasic processing endoproteases. Cell 1991, 66:1-3.
35. Nakagawa M., Ueyama M., Tsuruta H., Uno T., Kanamaru K., Mikami B., Yamagata H. Functional analysis of the cucumisin propeptide as a potent inhibitor of its mature enzyme. J. Biol. Chem. 2010, 285:29797-29807.
36. Zhu X., Ohta Y., Jordan F., Inouye M. Pro-sequence of subtilisin can guide the refolding of denatured subtilisin in an intermolecular process. Nature 1989, 339:483-484.
37. Li Y., Hu Z., Jordan F., Inouye M. Functional analysis of the propeptide of subtilisin E as an intramolecular chaperone for protein folding. Refolding and inhibitory abilities of propeptide mutants. J. Biol. Chem. 1995, 270:25127-25132.
38. Li Y., Inouye M. Autoprocessing of prothiolsubtilisin E in which active-site serine 221 is altered to cysteine. J. Biol. Chem. 1994, 269:4169-4174.
39. Molloy S.S., Thomas L., VanSlyke J.K., Stenberg P.E., Thomas G. Intracellular trafficking and activation of the furin proprotein convertase: localization to the TGN and recycling from the cell surface. EMBO J. 1994, 13:18-33.
40. Leduc R., Molloy S.S., Thorne B.A., Thomas G. Activation of human furin precursor processing endoprotease occurs by an intramolecular autoproteolytic cleavage. J. Biol. Chem. 1992, 267:14304-14308.
41. Cedzich A., Huttenlocher F., Kuhn B.M., Pfannstiel J., Gabler L., Stintzi A., Schaller A. The protease-associated (PA) domain and C-terminal extension are required for zymogen processing, sorting within the secretory pathway, and activity of tomato subtilase 3 (SlSBT3). J. Biol. Chem. 2009, 284:14068-14078.
42. Creemers J.W.M., Vey M., Schäfer W., Ayoubi T.A.Y., Roebroek A.J.M., Klenk H.-D., Garten W., Van de Ven W.J.M. Endoproteolytic cleavage of its propeptide is a prerequisite for efficient transport of furin out of the endoplasmic reticulum. J. Biol. Chem. 1995, 270:2695-2702.
43. 2+-independence and activation by homodimerization of tomato subtilase 3. Proc. Natl. Acad. Sci. USA 2009, 106:17223-17228.
44. Smith C.A., Toogood H.S., Baker H.M., Daniel R.M., Baker E.N. Calcium-mediated thermostability in the subtilisin superfamily: the crystal structure of Bacillus Ak.1 protease at 1.8 A resolution. J. Mol. Biol. 1999, 294:1027-1040.
45. Alexander P.A., Ruan B., Bryan P.N. Cation-dependent stability of subtilisin. Biochemistry 2001, 40:10634-10639.
46. Rose R., Schaller A., Ottmann C. Structural features of plant subtilases. Plant Sig. Behav. 2010, 5:100-183.
47. Luo X., Hofmann K. The protease-associated domain: a homology domain associated with multiple classes of proteases. Trends Biochem. Sci. 2001, 26:147-148.
48. Lawrence C.M., Ray S., Babyonyshev M., Galluser R., Borhani D.W., Harrison S.C. Crystal structure of the ectodomain of human transferrin receptor. Science 1999, 286:779-782.
49. Kagawa T.F., O'Connell M.R., Mouat P., Paoli M., O'Toole P.W., Cooney J.C. Model for substrate interactions in C5a peptidase from Streptococcus pyogenes: A 1.9 Å crystal structure of the active form of ScpA. J. Mol. Biol. 2009, 386:754-772.
50. Kaneda M., Sobue A., Eida S., Tominaga N. Isolation and characterization of proteinases from the sarcocarp of snake-gourd fruit. J. Biochem. 1986, 99:569-577.
51. Chichkova N.V., Galiullina R.A., Taliansky M.E., Vartapetian A.B. Tissue disruption activates a plant caspase-like protease with TATD cleavage specificity. Plant Stress 2008, 2:89-95.
52. Rose R., Huttenlocher F., Cedzich A., Kaiser M., Schaller A., Ottmann C. Purification, crystallization and preliminary X-ray diffraction analysis of a plant subtilase. Acta Cryst. F 2009, 65:522-525.
53. Liu J.X., Srivastava R., Che P., Howell S.H. Salt stress responses in Arabidopsis utilize a signal transduction pathway related to endoplasmic reticulum stress signaling. Plant J. 2007, 51:897-909.
54. Tian M.Y., Benedetti B., Kamoun S. A second kazal-like protease inhibitor from Phytophthora infestans inhibits and interacts with the apoplastic pathogenesis-related protease P69B of tomato. Plant Physiol. 2005, 138:1785-1793.
55. Berger D., Altmann T. A subtilisin-like serine protease involved in the regulation of stomatal density and distribution in Arabidopsis thaliana. Genes Dev. 2000, 14:1119-1131.
56. Rautengarten C., Usadel B., Neumetzler L., Hartmann J., Bussis D., Altmann T. A subtilisin-like serine protease essential for mucilage release from Arabidopsis seed coats. Plant J. 2008, 54:466-480.
57. Liu J.-X., Srivastava R., Howell S. Overexpression of an Arabidopsis gene encoding a subtilase (AtSBT5.4) produces a clavata-like phenotype. Planta 2009, 230:687-697.
58. Wolf W.M., Rausch T., Greiner S. The N-terminal pro region mediates retention of unprocessed type-I PME in the Golgi apparatus. Plant J. 2009, 58:361-375.
59. Tanaka H., Onouchi H., Kondo M., Hara-Nishimura I., Nishimura M., Machida C., Machida Y. A subtilisin-like serine protease is required for epidermal surface formation in Arabidopsis embryos and juvenile plants. Development 2001, 128:4681-4689.
60. Takeda N., Sato S., Asamizu E., Tabata S., Parniske M. Apoplastic plant subtilases support arbuscular mycorrhiza development in Lotus japonicas. Plant J. 2009, 58:766-777.
61. von Groll U., Berger D., Altmann T. The subtilisin-like serine protease SDD1 mediates cell-to-cell signaling during Arabidopsis stomatal development. Plant Cell 2002, 14:1527-1539.
62. Tanaka S., Koga Y., Takano K., Kanaya S. Inhibition of chymotrypsin- and subtilisin-like serine proteases with Tk-serpin from hyperthermophilic archaeon Thermococcus kodakaraensis. Biochim. Biophys Acta. 2011, 1814:299-307.
63. Che P., Bussell J.D., Zhou W., Estavillo G.M., Pogson B.J., Smith S.M. Signaling from the endoplasmic reticulum activates brassinosteroid signaling and promotes acclimation to stress in Arabidopsis. Sci. Signal. 2010, 3:ra69.
64. Liu J.-X., Howell S.H. bZIP28 and NF-Y transcription factors are activated by ER stress and assemble into a transcriptional complex to regulate stress response genes in Arabidopsis. Plant Cell 2010, 22:782-796.
65. Liu J.-X., Howell S.H. Endoplasmic reticulum protein quality control and its relationship to environmental stress responses in plants. Plant Cell 2010, 22:2930-2942.
66. Book A.J., Yang P.Z., Scalf M., Smith L.M., Vierstra R.D. Tripeptidyl peptidase II. An oligomeric protease complex from Arabidopsis. Plant Physiol. 2005, 138:1046-1057.
67. Polge C., Jaquinod M., Holzer F., Bourguignon J., Walling L., Brouquisse R. Evidence for the existence in Arabidopsis thaliana of the proteasome proteolytic pathway. J. Biol. Chem. 2009, 284:35412-35424.
68. Beers E.P., Jones A.L., Dickermann A.W. The S8 serine, C1A cysteine and A1 aspartic protease families in Arabidopsis. Phytochemistry 2004, 65:43-58.
69. Schaller A. A cut above the rest: the regulatory function of plant proteases. Planta 2004, 220:183-197.
70. Van Der Hoorn R.A.L. Plant proteases: From phenotypes to molecular mechanisms. Annu. Rev. Plant Biol. 2008, 59:191-223.
71. Vierstra R.D. The ubiquitin-26S proteasome system at the nexus of plant biology. Nat. Rev. Mol. Cell. Biol. 2009, 10:385-397.