-
1
-
-
67949086784
-
Evolution of the Apicomplexa: where are we now?
-
doi: 10.1016/j.pt.2009.05.010
-
Morrison DA, (2009) Evolution of the Apicomplexa: where are we now? Trends Parasitol 25: 375-382. doi:10.1016/j.pt.2009.05.010. PubMed: 19635681.
-
(2009)
Trends Parasitol
, vol.25
, pp. 375-382
-
-
Morrison, D.A.1
-
2
-
-
39449099400
-
Plasmodium knowlesi: the fifth human malaria parasite
-
doi: 10.1086/524889
-
White NJ, (2008) Plasmodium knowlesi: the fifth human malaria parasite. Clin Infect Dis 46: 172-173. doi:10.1086/524889. PubMed: 18171246.
-
(2008)
Clin Infect Dis
, vol.46
, pp. 172-173
-
-
White, N.J.1
-
3
-
-
84856679687
-
Global malaria mortality between 1980 and 2010: a systematic analysis
-
doi: 10.1016/S0140-6736(12)60034-8
-
Murray CJ, Rosenfeld LC, Lim SS, Andrews KG, Foreman KJ, et al. (2012) Global malaria mortality between 1980 and 2010: a systematic analysis. Lancet 379: 413-431. doi:10.1016/S0140-6736(12)60034-8. PubMed: 22305225.
-
(2012)
Lancet
, vol.379
, pp. 413-431
-
-
Murray, C.J.1
Rosenfeld, L.C.2
Lim, S.S.3
Andrews, K.G.4
Foreman, K.J.5
-
4
-
-
68049116940
-
Toxoplasmosis snapshots: global status of Toxoplasma gondii seroprevalence and implications for pregnancy and congenital toxoplasmosis
-
doi: 10.1016/j.ijpara.2009.04.003
-
Pappas G, Roussos N, Falagas ME, (2009) Toxoplasmosis snapshots: global status of Toxoplasma gondii seroprevalence and implications for pregnancy and congenital toxoplasmosis. Int J Parasitol 39: 1385-1394. doi:10.1016/j.ijpara.2009.04.003. PubMed: 19433092.
-
(2009)
Int J Parasitol
, vol.39
, pp. 1385-1394
-
-
Pappas, G.1
Roussos, N.2
Falagas, M.E.3
-
5
-
-
0033647231
-
Toxoplasma gondii: from animals to humans
-
doi: 10.1016/S0020-7519(00)00124-7
-
Tenter AM, Heckeroth AR, Weiss LM, (2000) Toxoplasma gondii: from animals to humans. Int J Parasitol 30: 1217-1258. doi:10.1016/S0020-7519(00)00124-7. PubMed: 11113252.
-
(2000)
Int J Parasitol
, vol.30
, pp. 1217-1258
-
-
Tenter, A.M.1
Heckeroth, A.R.2
Weiss, L.M.3
-
6
-
-
2942541583
-
Toxoplasmosis
-
doi: 10.1016/S0140-6736(04)16412-X
-
Montoya JG, Liesenfeld O, (2004) Toxoplasmosis. Lancet 363: 1965-1976. doi:10.1016/S0140-6736(04)16412-X. PubMed: 15194258.
-
(2004)
Lancet
, vol.363
, pp. 1965-1976
-
-
Montoya, J.G.1
Liesenfeld, O.2
-
7
-
-
79952450596
-
Cryptosporidiosis in patients with HIV/AIDS
-
doi: 10.1097/QAD.0b013e3283437e88
-
O'Connor RM, Shaffie R, Kang G, Ward HD, (2011) Cryptosporidiosis in patients with HIV/AIDS. AIDS 25: 549-560. doi:10.1097/QAD.0b013e3283437e88. PubMed: 21160413.
-
(2011)
AIDS
, vol.25
, pp. 549-560
-
-
O'Connor, R.M.1
Shaffie, R.2
Kang, G.3
Ward, H.D.4
-
8
-
-
20344393371
-
Babesiosis of cattle
-
doi: 10.1017/S0031182004005190
-
Bock R, Jackson L, de Vos A, Jorgensen W, (2004) Babesiosis of cattle. Parasitology 129 (Suppl):: S247-S269. doi:10.1017/S0031182004005190. PubMed: 15938514.
-
(2004)
Parasitology
, vol.129
, Issue.SUPPL.
-
-
Bock, R.1
Jackson, L.2
de Vos, A.3
Jorgensen, W.4
-
9
-
-
33645741206
-
Eimeriosis in cattle: current understanding
-
doi: 10.1111/j.1439-0450.2005.00894.x
-
Daugschies A, Najdrowski M, (2005) Eimeriosis in cattle: current understanding. J Vet Med B Infect Dis Vet Public Health 52: 417-427. doi:10.1111/j.1439-0450.2005.00894.x. PubMed: 16364016.
-
(2005)
J Vet Med B Infect Dis Vet Public Health
, vol.52
, pp. 417-427
-
-
Daugschies, A.1
Najdrowski, M.2
-
10
-
-
79960306192
-
Neosporosis in animals--the last five years
-
doi: 10.1016/j.vetpar.2011.05.031
-
Dubey JP, Schares G, (2011) Neosporosis in animals--the last five years. Vet Parasitol 180: 90-108. doi:10.1016/j.vetpar.2011.05.031. PubMed: 21704458.
-
(2011)
Vet Parasitol
, vol.180
, pp. 90-108
-
-
Dubey, J.P.1
Schares, G.2
-
11
-
-
79151476920
-
Population diversity and multiplicity of infection in Theileria annulata
-
doi: 10.1016/j.ijpara.2010.08.004
-
Weir W, Karagenç T, Gharbi M, Simuunza M, Aypak S, et al. (2011) Population diversity and multiplicity of infection in Theileria annulata. Int J Parasitol 41: 193-203. doi:10.1016/j.ijpara.2010.08.004. PubMed: 20833170.
-
(2011)
Int J Parasitol
, vol.41
, pp. 193-203
-
-
Weir, W.1
Karagenç, T.2
Gharbi, M.3
Simuunza, M.4
Aypak, S.5
-
12
-
-
57649129659
-
Evolution of the apicoplast and its hosts: from heterotrophy to autotrophy and back again
-
doi: 10.1016/j.ijpara.2008.07.010
-
Oborník M, Janouskovec J, Chrudimský T, Lukes J, (2009) Evolution of the apicoplast and its hosts: from heterotrophy to autotrophy and back again. Int J Parasitol 39: 1-12. doi:10.1016/j.ijpara.2008.07.010. PubMed: 18822291.
-
(2009)
Int J Parasitol
, vol.39
, pp. 1-12
-
-
Oborník, M.1
Janouskovec, J.2
Chrudimský, T.3
Lukes, J.4
-
13
-
-
0036682223
-
Golgi biogenesis in Toxoplasma gondii
-
doi: 10.1038/nature00946
-
Pelletier L, Stern CA, Pypaert M, Sheff D, Ngô HM, et al. (2002) Golgi biogenesis in Toxoplasma gondii. Nature 418: 548-552. doi:10.1038/nature00946. PubMed: 12152082.
-
(2002)
Nature
, vol.418
, pp. 548-552
-
-
Pelletier, L.1
Stern, C.A.2
Pypaert, M.3
Sheff, D.4
Ngô, H.M.5
-
14
-
-
39849104160
-
Spatial dissection of the cis- and trans-Golgi compartments in the malaria parasite Plasmodium falciparum
-
doi: 10.1111/j.1365-2958.2008.06125.x
-
Struck NS, Herrmann S, Schmuck-Barkmann I, de Souza Dias S, Haase S, et al. (2008) Spatial dissection of the cis- and trans-Golgi compartments in the malaria parasite Plasmodium falciparum. Mol Microbiol 67: 1320-1330. doi:10.1111/j.1365-2958.2008.06125.x. PubMed: 18284574.
-
(2008)
Mol Microbiol
, vol.67
, pp. 1320-1330
-
-
Struck, N.S.1
Herrmann, S.2
Schmuck-Barkmann, I.3
de Souza Dias, S.4
Haase, S.5
-
15
-
-
77349092837
-
Peroxisome diversity and evolution
-
doi: 10.1098/rstb.2009.0240
-
Gabaldón T, (2010) Peroxisome diversity and evolution. Philos Trans R Soc Lond B Biol Sci 365: 765-773. doi:10.1098/rstb.2009.0240. PubMed: 20124343.
-
(2010)
Philos Trans R Soc Lond B Biol Sci
, vol.365
, pp. 765-773
-
-
Gabaldón, T.1
-
16
-
-
33645767721
-
Cytoskeletal components of an invasion machine--the apical complex of Toxoplasma gondii
-
doi: 10.1371/journal.ppat.0020013
-
Hu K, Johnson J, Florens L, Fraunholz M, Suravajjala S, et al. (2006) Cytoskeletal components of an invasion machine--the apical complex of Toxoplasma gondii. PLOS Pathog 2: e13. doi:10.1371/journal.ppat.0020013. PubMed: 16518471.
-
(2006)
PLOS Pathog
, vol.2
-
-
Hu, K.1
Johnson, J.2
Florens, L.3
Fraunholz, M.4
Suravajjala, S.5
-
17
-
-
55549139748
-
Host-cell invasion by malaria parasites: insights from Plasmodium and Toxoplasma
-
doi: 10.1016/j.pt.2008.08.006
-
Baum J, Gilberger TW, Frischknecht F, Meissner M, (2008) Host-cell invasion by malaria parasites: insights from Plasmodium and Toxoplasma. Trends Parasitol 24: 557-563. doi:10.1016/j.pt.2008.08.006. PubMed: 18835222.
-
(2008)
Trends Parasitol
, vol.24
, pp. 557-563
-
-
Baum, J.1
Gilberger, T.W.2
Frischknecht, F.3
Meissner, M.4
-
18
-
-
0037071541
-
Secretory traffic in the eukaryotic parasite Toxoplasma gondii: less is more
-
doi: 10.1083/jcb.200112144
-
Joiner KA, Roos DS, (2002) Secretory traffic in the eukaryotic parasite Toxoplasma gondii: less is more. J Cell Biol 157: 557-563. doi:10.1083/jcb.200112144. PubMed: 12011107.
-
(2002)
J Cell Biol
, vol.157
, pp. 557-563
-
-
Joiner, K.A.1
Roos, D.S.2
-
19
-
-
0034017106
-
Toxoplasma gondii: conserved protein machinery in an unusual secretory pathway?
-
doi: 10.1016/S1286-4579(00)00274-4
-
Liendo A, Joiner KA, (2000) Toxoplasma gondii: conserved protein machinery in an unusual secretory pathway? Microbes Infect 2: 137-144. doi:10.1016/S1286-4579(00)00274-4. PubMed: 10742686.
-
(2000)
Microbes Infect
, vol.2
, pp. 137-144
-
-
Liendo, A.1
Joiner, K.A.2
-
20
-
-
0033923370
-
Lysosome-related organelles
-
doi: 10.1096/fj.14.10.1265
-
Dell'Angelica EC, Mullins C, Caplan S, Bonifacino JS, (2000) Lysosome-related organelles. FASEB J 14: 1265-1278. doi:10.1096/fj.14.10.1265. PubMed: 10877819.
-
(2000)
FASEB J
, vol.14
, pp. 1265-1278
-
-
Dell'Angelica, E.C.1
Mullins, C.2
Caplan, S.3
Bonifacino, J.S.4
-
21
-
-
0038237513
-
AP-1 in Toxoplasma gondii mediates biogenesis of the rhoptry secretory organelle from a post-Golgi compartment
-
doi: 10.1074/jbc.M208291200
-
Ngô HM, Yang M, Paprotka K, Pypaert M, Hoppe H, et al. (2003) AP-1 in Toxoplasma gondii mediates biogenesis of the rhoptry secretory organelle from a post-Golgi compartment. J Biol Chem 278: 5343-5352. doi:10.1074/jbc.M208291200. PubMed: 12446678.
-
(2003)
J Biol Chem
, vol.278
, pp. 5343-5352
-
-
Ngô, H.M.1
Yang, M.2
Paprotka, K.3
Pypaert, M.4
Hoppe, H.5
-
22
-
-
84875968974
-
An overexpression screen of Toxoplasma gondii Rab-GTPases reveals distinct transport routes to the micronemes
-
Kremer K, Kamin D, Rittweger E, Wilkes J, Flammer H, et al. (2013) An overexpression screen of Toxoplasma gondii Rab-GTPases reveals distinct transport routes to the micronemes. PLOS Pathog 9: e1003213.
-
(2013)
PLOS Pathog
, vol.9
-
-
Kremer, K.1
Kamin, D.2
Rittweger, E.3
Wilkes, J.4
Flammer, H.5
-
23
-
-
60349130928
-
A dynamin is required for the biogenesis of secretory organelles in Toxoplasma gondii
-
doi: 10.1016/j.cub.2009.01.016
-
Breinich MS, Ferguson DJ, Foth BJ, van Dooren GG, Lebrun M, et al. (2009) A dynamin is required for the biogenesis of secretory organelles in Toxoplasma gondii. Curr Biol 19: 277-286. doi:10.1016/j.cub.2009.01.016. PubMed: 19217293.
-
(2009)
Curr Biol
, vol.19
, pp. 277-286
-
-
Breinich, M.S.1
Ferguson, D.J.2
Foth, B.J.3
van Dooren, G.G.4
Lebrun, M.5
-
24
-
-
84861129871
-
Toxoplasma sortilin-like receptor regulates protein transport and is essential for apical secretory organelle biogenesis and host infection
-
doi: 10.1016/j.chom.2012.03.006
-
Sloves PJ, Delhaye S, Mouveaux T, Werkmeister E, Slomianny C, et al. (2012) Toxoplasma sortilin-like receptor regulates protein transport and is essential for apical secretory organelle biogenesis and host infection. Cell Host Microbe 11: 515-527. doi:10.1016/j.chom.2012.03.006. PubMed: 22607804.
-
(2012)
Cell Host Microbe
, vol.11
, pp. 515-527
-
-
Sloves, P.J.1
Delhaye, S.2
Mouveaux, T.3
Werkmeister, E.4
Slomianny, C.5
-
25
-
-
77953512608
-
Cathepsin L occupies a vacuolar compartment and is a protein maturase within the endo/exocytic system of Toxoplasma gondii
-
doi: 10.1111/j.1365-2958.2010.07181.x
-
Parussini F, Coppens I, Shah PP, Diamond SL, Carruthers VB,. (2010) Cathepsin L occupies a vacuolar compartment and is a protein maturase within the endo/exocytic system of Toxoplasma gondii. Mol Microbiol 76: 1340-1357. doi:10.1111/j.1365-2958.2010.07181.x. PubMed: 20444089.
-
(2010)
Mol Microbiol
, vol.76
, pp. 1340-1357
-
-
Parussini, F.1
Coppens, I.2
Shah, P.P.3
Diamond, S.L.4
Carruthers, V.B.5
-
26
-
-
0035096272
-
Targeting of soluble proteins to the rhoptries and micronemes in Toxoplasma gondii
-
doi: 10.1016/S0166-6851(00)00379-0
-
Striepen B, Soldati D, Garcia-Reguet N, Dubremetz JF, Roos DS, (2001) Targeting of soluble proteins to the rhoptries and micronemes in Toxoplasma gondii. Mol Biochem Parasitol 113: 45-53. doi:10.1016/S0166-6851(00)00379-0. PubMed: 11254953.
-
(2001)
Mol Biochem Parasitol
, vol.113
, pp. 45-53
-
-
Striepen, B.1
Soldati, D.2
Garcia-Reguet, N.3
Dubremetz, J.F.4
Roos, D.S.5
-
27
-
-
63449134429
-
Identification of rhoptry trafficking determinants and evidence for a novel sorting mechanism in the malaria parasite Plasmodium falciparum
-
PubMed: 19266084
-
Richard D, Kats LM, Langer C, Black CG, Mitri K, et al. (2009) Identification of rhoptry trafficking determinants and evidence for a novel sorting mechanism in the malaria parasite Plasmodium falciparum. PLOS Pathog 5: e1000328. PubMed: 19266084.
-
(2009)
PLOS Pathog
, vol.5
-
-
Richard, D.1
Kats, L.M.2
Langer, C.3
Black, C.G.4
Mitri, K.5
-
28
-
-
38149092544
-
Protein trafficking to apical organelles of malaria parasites - building an invasion machine
-
PubMed: 18047549
-
Kats LM, Cooke BM, Coppel RL, Black CG, (2008) Protein trafficking to apical organelles of malaria parasites- building an invasion machine. Traffic 9: 176-186. PubMed: 18047549.
-
(2008)
Traffic
, vol.9
, pp. 176-186
-
-
Kats, L.M.1
Cooke, B.M.2
Coppel, R.L.3
Black, C.G.4
-
29
-
-
68049105101
-
Rab GTPases as coordinators of vesicle traffic
-
doi: 10.1038/nrg2642
-
Stenmark H, (2009) Rab GTPases as coordinators of vesicle traffic. Nat Rev Mol Cell Biol 10: 513-525. doi:10.1038/nrg2642. PubMed: 19603039.
-
(2009)
Nat Rev Mol Cell Biol
, vol.10
, pp. 513-525
-
-
Stenmark, H.1
-
30
-
-
78049408948
-
At the junction of SNARE and SM protein function
-
doi: 10.1016/j.ceb.2010.04.006
-
Carr CM, Rizo J, (2010) At the junction of SNARE and SM protein function. Curr Opin Cell Biol 22: 488-495. doi:10.1016/j.ceb.2010.04.006. PubMed: 20471239.
-
(2010)
Curr Opin Cell Biol
, vol.22
, pp. 488-495
-
-
Carr, C.M.1
Rizo, J.2
-
31
-
-
78149306025
-
Multisubunit tethering complexes and their role in membrane fusion
-
doi: 10.1016/j.cub.2010.09.015
-
Bröcker C, Engelbrecht-Vandré S, Ungermann C, (2010) Multisubunit tethering complexes and their role in membrane fusion. Curr Biol 20: R943-R952. doi:10.1016/j.cub.2010.09.015. PubMed: 21056839.
-
(2010)
Curr Biol
, vol.20
-
-
Bröcker, C.1
Engelbrecht-Vandré, S.2
Ungermann, C.3
-
32
-
-
78751705945
-
New links between vesicle coats and Rab-mediated vesicle targeting
-
doi: 10.1016/j.semcdb.2010.07.003
-
Angers CG, Merz AJ, (2011) New links between vesicle coats and Rab-mediated vesicle targeting. Semin Cell Dev Biol 22: 18-26. doi:10.1016/j.semcdb.2010.07.003. PubMed: 20643221.
-
(2011)
Semin Cell Dev Biol
, vol.22
, pp. 18-26
-
-
Angers, C.G.1
Merz, A.J.2
-
33
-
-
59449093322
-
Repeated secondary loss of adaptin complex genes in the Apicomplexa
-
doi: 10.1016/j.parint.2008.12.002
-
Nevin WD, Dacks JB, (2009) Repeated secondary loss of adaptin complex genes in the Apicomplexa. Parasitol Int 58: 86-94. doi:10.1016/j.parint.2008.12.002. PubMed: 19146987.
-
(2009)
Parasitol Int
, vol.58
, pp. 86-94
-
-
Nevin, W.D.1
Dacks, J.B.2
-
34
-
-
47149100894
-
Evolution of the multivesicular body ESCRT machinery; retention across the eukaryotic lineage
-
doi: 10.1111/j.1600-0854.2008.00797.x
-
Leung KF, Dacks JB, Field MC, (2008) Evolution of the multivesicular body ESCRT machinery; retention across the eukaryotic lineage. Traffic 9: 1698-1716. doi:10.1111/j.1600-0854.2008.00797.x. PubMed: 18637903.
-
(2008)
Traffic
, vol.9
, pp. 1698-1716
-
-
Leung, K.F.1
Dacks, J.B.2
Field, M.C.3
-
35
-
-
43849106495
-
Comparative genomics of the Rab protein family in apicomplexan parasites
-
doi: 10.1016/j.micinf.2008.01.017
-
Langsley G, van Noort V, Carret C, Meissner M, de Villiers EP, et al. (2008) Comparative genomics of the Rab protein family in apicomplexan parasites. Microbes Infect 10: 462-470. doi:10.1016/j.micinf.2008.01.017. PubMed: 18468471.
-
(2008)
Microbes Infect
, vol.10
, pp. 462-470
-
-
Langsley, G.1
van Noort, V.2
Carret, C.3
Meissner, M.4
de Villiers, E.P.5
-
36
-
-
84864805551
-
Sculpting the endomembrane system in deep time: high resolution phylogenetics of Rab GTPases
-
doi: 10.1242/jcs.101378
-
Elias M, Brighouse A, Gabernet-Castello C, Field MC, Dacks JB, (2012) Sculpting the endomembrane system in deep time: high resolution phylogenetics of Rab GTPases. J Cell Sci 125: 2500-2508. doi:10.1242/jcs.101378. PubMed: 22366452.
-
(2012)
J Cell Sci
, vol.125
, pp. 2500-2508
-
-
Elias, M.1
Brighouse, A.2
Gabernet-Castello, C.3
Field, M.C.4
Dacks, J.B.5
-
37
-
-
33847648364
-
Control systems for membrane fusion in the ancestral eukaryote; evolution of tethering complexes and SM proteins
-
doi: 10.1186/1471-2148-7-29
-
Koumandou VL, Dacks JB, Coulson RM, Field MC, (2007) Control systems for membrane fusion in the ancestral eukaryote; evolution of tethering complexes and SM proteins. BMC Evol Biol 7: 29. doi:10.1186/1471-2148-7-29. PubMed: 17319956.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 29
-
-
Koumandou, V.L.1
Dacks, J.B.2
Coulson, R.M.3
Field, M.C.4
-
38
-
-
0037250241
-
ToxoDB: accessing the Toxoplasma gondii genome
-
doi: 10.1093/nar/gkg072
-
Kissinger JC, Gajria B, Li L, Paulsen IT, Roos DS, (2003) ToxoDB: accessing the Toxoplasma gondii genome. Nucleic Acids Res 31: 234-236. doi:10.1093/nar/gkg072. PubMed: 12519989.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 234-236
-
-
Kissinger, J.C.1
Gajria, B.2
Li, L.3
Paulsen, I.T.4
Roos, D.S.5
-
39
-
-
33847219038
-
The origins of multicellularity: a multi-taxon genome initiative
-
doi: 10.1016/j.tig.2007.01.005
-
Ruiz-Trillo I, Burger G, Holland PW, King N, Lang BF, et al. (2007) The origins of multicellularity: a multi-taxon genome initiative. Trends Genet 23: 113-118. doi:10.1016/j.tig.2007.01.005. PubMed: 17275133.
-
(2007)
Trends Genet
, vol.23
, pp. 113-118
-
-
Ruiz-Trillo, I.1
Burger, G.2
Holland, P.W.3
King, N.4
Lang, B.F.5
-
40
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
doi: 10.1093/nar/25.17.3389
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402. doi:10.1093/nar/25.17.3389. PubMed: 9254694.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
-
41
-
-
78651285748
-
CDD: a Conserved Domain Database for the functional annotation of proteins
-
doi: 10.1093/nar/gkq1189
-
Marchler-Bauer A, Lu S, Anderson JB, Chitsaz F, Derbyshire MK, et al. (2011) CDD: a Conserved Domain Database for the functional annotation of proteins. Nucleic Acids Res 39: D225-D229. doi:10.1093/nar/gkq1189. PubMed: 21109532.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Marchler-Bauer, A.1
Lu, S.2
Anderson, J.B.3
Chitsaz, F.4
Derbyshire, M.K.5
-
42
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
doi: 10.1093/nar/gkh340
-
Edgar RC, (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797. doi:10.1093/nar/gkh340. PubMed: 15034147.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
43
-
-
79959931985
-
HMMER web server: interactive sequence similarity searching
-
doi: 10.1093/nar/gkr367
-
Finn RD, Clements J, Eddy SR, (2011) HMMER web server: interactive sequence similarity searching. Nucleic Acids Res 39: W29-W37. doi:10.1093/nar/gkr367. PubMed: 21593126.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Finn, R.D.1
Clements, J.2
Eddy, S.R.3
-
44
-
-
16344373015
-
Protein homology detection by HMM-HMM comparison
-
doi: 10.1093/bioinformatics/bti125
-
Söding J, (2005) Protein homology detection by HMM-HMM comparison. Bioinformatics 21: 951-960. doi:10.1093/bioinformatics/bti125. PubMed: 15531603.
-
(2005)
Bioinformatics
, vol.21
, pp. 951-960
-
-
Söding, J.1
-
45
-
-
84876671302
-
An automated graphics tool for comparative genomics: the Coulson plot generator
-
doi: 10.1186/1471-2105-14-141
-
Field HI, Coulson RM, Field MC, (2013) An automated graphics tool for comparative genomics: the Coulson plot generator. BMC Bioinformatics 14: 141. doi:10.1186/1471-2105-14-141. PubMed: 23621955.
-
(2013)
BMC Bioinformatics
, vol.14
, pp. 141
-
-
Field, H.I.1
Coulson, R.M.2
Field, M.C.3
-
46
-
-
79954529507
-
ProtTest 3: fast selection of best-fit models of protein evolution
-
doi: 10.1093/bioinformatics/btr088
-
Darriba D, Taboada GL, Doallo R, Posada D, (2011) ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics 27: 1164-1165. doi:10.1093/bioinformatics/btr088. PubMed: 21335321.
-
(2011)
Bioinformatics
, vol.27
, pp. 1164-1165
-
-
Darriba, D.1
Taboada, G.L.2
Doallo, R.3
Posada, D.4
-
47
-
-
84860109324
-
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space
-
doi: 10.1093/sysbio/sys029
-
Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, et al. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61: 539-542. doi:10.1093/sysbio/sys029. PubMed: 22357727.
-
(2012)
Syst Biol
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
van der Mark, P.3
Ayres, D.L.4
Darling, A.5
-
48
-
-
77950806408
-
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
-
Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, et al. (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59: 307-321.
-
(2010)
Syst Biol
, vol.59
, pp. 307-321
-
-
Guindon, S.1
Dufayard, J.F.2
Lefort, V.3
Anisimova, M.4
Hordijk, W.5
-
49
-
-
33750403801
-
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
doi: 10.1093/bioinformatics/btl446
-
Stamatakis A, (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. doi:10.1093/bioinformatics/btl446. PubMed: 16928733.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
50
-
-
78651238244
-
H2A.Z demarcates intergenic regions of the Plasmodium falciparum epigenome that are dynamically marked by H3K9ac and H3K4me3
-
PubMed: 21187892
-
Bártfai R, Hoeijmakers WA, Salcedo-Amaya AM, Smits AH, Janssen-Megens E, et al. (2010) H2A.Z demarcates intergenic regions of the Plasmodium falciparum epigenome that are dynamically marked by H3K9ac and H3K4me3. PLOS Pathog 6: e1001223. PubMed: 21187892.
-
(2010)
PLOS Pathog
, vol.6
-
-
Bártfai, R.1
Hoeijmakers, W.A.2
Salcedo-Amaya, A.M.3
Smits, A.H.4
Janssen-Megens, E.5
-
51
-
-
77957874167
-
Coordinated progression through two subtranscriptomes underlies the tachyzoite cycle of Toxoplasma gondii
-
doi: 10.1371/journal.pone.0012354
-
Behnke MS, Wootton JC, Lehmann MM, Radke JB, Lucas O, et al. (2010) Coordinated progression through two subtranscriptomes underlies the tachyzoite cycle of Toxoplasma gondii. PLOS ONE 5: e12354. doi:10.1371/journal.pone.0012354. PubMed: 20865045.
-
(2010)
PLOS ONE
, vol.5
-
-
Behnke, M.S.1
Wootton, J.C.2
Lehmann, M.M.3
Radke, J.B.4
Lucas, O.5
-
52
-
-
22844451398
-
The Plasmodium falciparum sexual development transcriptome: a microarray analysis using ontology-based pattern identification
-
doi: 10.1016/j.molbiopara.2005.05.007
-
Young JA, Fivelman QL, Blair PL, de la Vega P, Le Roch KG, et al. (2005) The Plasmodium falciparum sexual development transcriptome: a microarray analysis using ontology-based pattern identification. Mol Biochem Parasitol 143: 67-79. doi:10.1016/j.molbiopara.2005.05.007. PubMed: 16005087.
-
(2005)
Mol Biochem Parasitol
, vol.143
, pp. 67-79
-
-
Young, J.A.1
Fivelman, Q.L.2
Blair, P.L.3
de la Vega, P.4
Le Roch, K.G.5
-
53
-
-
40749116835
-
Phylogenomics reshuffles the eukaryotic supergroups
-
doi: 10.1371/journal.pone.0000790
-
Burki F, Shalchian-Tabrizi K, Minge M, Skjaeveland A, Nikolaev SI, et al. (2007) Phylogenomics reshuffles the eukaryotic supergroups. PLOS ONE 2: e790. doi:10.1371/journal.pone.0000790. PubMed: 17726520.
-
(2007)
PLOS ONE
, vol.2
-
-
Burki, F.1
Shalchian-Tabrizi, K.2
Minge, M.3
Skjaeveland, A.4
Nikolaev, S.I.5
-
54
-
-
84870564943
-
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs
-
doi: 10.1038/nature11681
-
Curtis BA, Tanifuji G, Burki F, Gruber A, Irimia M, et al. (2012) Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs. Nature 492: 59-65. doi:10.1038/nature11681. PubMed: 23201678.
-
(2012)
Nature
, vol.492
, pp. 59-65
-
-
Curtis, B.A.1
Tanifuji, G.2
Burki, F.3
Gruber, A.4
Irimia, M.5
-
55
-
-
79955737985
-
Organization and assembly of the TRAPPII complex
-
doi: 10.1111/j.1600-0854.2011.01181.x
-
Choi C, Davey M, Schluter C, Pandher P, Fang Y, et al. (2011) Organization and assembly of the TRAPPII complex. Traffic 12: 715-725. doi:10.1111/j.1600-0854.2011.01181.x. PubMed: 21453443.
-
(2011)
Traffic
, vol.12
, pp. 715-725
-
-
Choi, C.1
Davey, M.2
Schluter, C.3
Pandher, P.4
Fang, Y.5
-
56
-
-
77958487311
-
TRAPP complexes in membrane traffic: convergence through a common Rab
-
doi: 10.1038/nrm2999
-
Barrowman J, Bhandari D, Reinisch K, Ferro-Novick S, (2010) TRAPP complexes in membrane traffic: convergence through a common Rab. Nat Rev Mol Cell Biol 11: 759-763. doi:10.1038/nrm2999. PubMed: 20966969.
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, pp. 759-763
-
-
Barrowman, J.1
Bhandari, D.2
Reinisch, K.3
Ferro-Novick, S.4
-
57
-
-
56149091013
-
The TRAPP complex: insights into its architecture and function
-
doi: 10.1111/j.1600-0854.2008.00833.x
-
Sacher M, Kim YG, Lavie A, Oh BH, Segev N, (2008) The TRAPP complex: insights into its architecture and function. Traffic 9: 2032-2042. doi:10.1111/j.1600-0854.2008.00833.x. PubMed: 18801063.
-
(2008)
Traffic
, vol.9
, pp. 2032-2042
-
-
Sacher, M.1
Kim, Y.G.2
Lavie, A.3
Oh, B.H.4
Segev, N.5
-
58
-
-
66749160940
-
Endoplasmic reticulum-associated secretory proteins Sec20p, Sec39p, and Dsl1p are involved in peroxisome biogenesis
-
doi: 10.1128/EC.00024-09
-
Perry RJ, Mast FD, Rachubinski RA, (2009) Endoplasmic reticulum-associated secretory proteins Sec20p, Sec39p, and Dsl1p are involved in peroxisome biogenesis. Eukaryot Cell 8: 830-843. doi:10.1128/EC.00024-09. PubMed: 19346454.
-
(2009)
Eukaryot Cell
, vol.8
, pp. 830-843
-
-
Perry, R.J.1
Mast, F.D.2
Rachubinski, R.A.3
-
59
-
-
66349116721
-
Identification of the neuroblastoma-amplified gene product as a component of the syntaxin 18 complex implicated in Golgi-to-endoplasmic reticulum retrograde transport
-
doi: 10.1091/mbc.E08-11-1104
-
Aoki T, Ichimura S, Itoh A, Kuramoto M, Shinkawa T, et al. (2009) Identification of the neuroblastoma-amplified gene product as a component of the syntaxin 18 complex implicated in Golgi-to-endoplasmic reticulum retrograde transport. Mol Cell Biol 20: 2639-2649. doi:10.1091/mbc.E08-11-1104. PubMed: 19369418.
-
(2009)
Mol Cell Biol
, vol.20
, pp. 2639-2649
-
-
Aoki, T.1
Ichimura, S.2
Itoh, A.3
Kuramoto, M.4
Shinkawa, T.5
-
60
-
-
33744768658
-
RINT-1 regulates the localization and entry of ZW10 to the syntaxin 18 complex
-
doi: 10.1091/mbc.E05-10-0973
-
Arasaki K, Taniguchi M, Tani K, Tagaya M, (2006) RINT-1 regulates the localization and entry of ZW10 to the syntaxin 18 complex. Mol Cell Biol 17: 2780-2788. doi:10.1091/mbc.E05-10-0973. PubMed: 16571679.
-
(2006)
Mol Cell Biol
, vol.17
, pp. 2780-2788
-
-
Arasaki, K.1
Taniguchi, M.2
Tani, K.3
Tagaya, M.4
-
61
-
-
11144354092
-
Implication of ZW10 in membrane trafficking between the endoplasmic reticulum and Golgi
-
doi: 10.1038/sj.emboj.7600135
-
Hirose H, Arasaki K, Dohmae N, Takio K, Hatsuzawa K, et al. (2004) Implication of ZW10 in membrane trafficking between the endoplasmic reticulum and Golgi. EMBO J 23: 1267-1278. doi:10.1038/sj.emboj.7600135. PubMed: 15029241.
-
(2004)
EMBO J
, vol.23
, pp. 1267-1278
-
-
Hirose, H.1
Arasaki, K.2
Dohmae, N.3
Takio, K.4
Hatsuzawa, K.5
-
62
-
-
77952554428
-
Dsl1p/Zw10: common mechanisms behind tethering vesicles and microtubules
-
doi: 10.1016/j.tcb.2010.02.001
-
Schmitt HD, (2010) Dsl1p/Zw10: common mechanisms behind tethering vesicles and microtubules. Trends Cell Biol 20: 257-268. doi:10.1016/j.tcb.2010.02.001. PubMed: 20226673.
-
(2010)
Trends Cell Biol
, vol.20
, pp. 257-268
-
-
Schmitt, H.D.1
-
63
-
-
77952613898
-
Structural analysis of the RZZ complex reveals common ancestry with multisubunit vesicle tethering machinery
-
doi: 10.1016/j.str.2010.02.014
-
Civril F, Wehenkel A, Giorgi FM, Santaguida S, Di Fonzo A, et al. (2010) Structural analysis of the RZZ complex reveals common ancestry with multisubunit vesicle tethering machinery. Structure 18: 616-626. doi:10.1016/j.str.2010.02.014. PubMed: 20462495.
-
(2010)
Structure
, vol.18
, pp. 616-626
-
-
Civril, F.1
Wehenkel, A.2
Giorgi, F.M.3
Santaguida, S.4
Di Fonzo, A.5
-
64
-
-
71149117138
-
A structure-based mechanism for vesicle capture by the multisubunit tethering complex Dsl1
-
doi: 10.1016/j.cell.2009.11.002
-
Ren Y, Yip CK, Tripathi A, Huie D, Jeffrey PD, et al. (2009) A structure-based mechanism for vesicle capture by the multisubunit tethering complex Dsl1. Cell 139: 1119-1129. doi:10.1016/j.cell.2009.11.002. PubMed: 20005805.
-
(2009)
Cell
, vol.139
, pp. 1119-1129
-
-
Ren, Y.1
Yip, C.K.2
Tripathi, A.3
Huie, D.4
Jeffrey, P.D.5
-
65
-
-
59649120867
-
Structural characterization of Tip20p and Dsl1p, subunits of the Dsl1p vesicle tethering complex
-
doi: 10.1038/nsmb.1548
-
Tripathi A, Ren Y, Jeffrey PD, Hughson FM, (2009) Structural characterization of Tip20p and Dsl1p, subunits of the Dsl1p vesicle tethering complex. Nat Struct Mol Biol 16: 114-123. doi:10.1038/nsmb.1548. PubMed: 19151722.
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 114-123
-
-
Tripathi, A.1
Ren, Y.2
Jeffrey, P.D.3
Hughson, F.M.4
-
66
-
-
79960118861
-
The Dsl1 protein tethering complex is a resident endoplasmic reticulum complex, which interacts with five soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptors (SNAREs): implications for fusion and fusion regulation
-
doi: 10.1074/jbc.M110.215327
-
Meiringer CT, Rethmeier R, Auffarth K, Wilson J, Perz A, et al. (2011) The Dsl1 protein tethering complex is a resident endoplasmic reticulum complex, which interacts with five soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptors (SNAREs): implications for fusion and fusion regulation. J Biol Chem 286: 25039-25046. doi:10.1074/jbc.M110.215327. PubMed: 21550981.
-
(2011)
J Biol Chem
, vol.286
, pp. 25039-25046
-
-
Meiringer, C.T.1
Rethmeier, R.2
Auffarth, K.3
Wilson, J.4
Perz, A.5
-
67
-
-
67949091245
-
Vps-C complexes: gatekeepers of endolysosomal traffic
-
doi: 10.1016/j.ceb.2009.05.007
-
Nickerson DP, Brett CL, Merz AJ, (2009) Vps-C complexes: gatekeepers of endolysosomal traffic. Curr Opin Cell Biol 21: 543-551. doi:10.1016/j.ceb.2009.05.007. PubMed: 19577915.
-
(2009)
Curr Opin Cell Biol
, vol.21
, pp. 543-551
-
-
Nickerson, D.P.1
Brett, C.L.2
Merz, A.J.3
-
68
-
-
0033634646
-
Class C Vps protein complex regulates vacuolar SNARE pairing and is required for vesicle docking/fusion
-
doi: 10.1016/S1097-2765(00)00064-2
-
Sato TK, Rehling P, Peterson MR, Emr SD, (2000) Class C Vps protein complex regulates vacuolar SNARE pairing and is required for vesicle docking/fusion. Mol Cell 6: 661-671. doi:10.1016/S1097-2765(00)00064-2. PubMed: 11030345.
-
(2000)
Mol Cell
, vol.6
, pp. 661-671
-
-
Sato, T.K.1
Rehling, P.2
Peterson, M.R.3
Emr, S.D.4
-
69
-
-
34247568898
-
The CORVET tethering complex interacts with the yeast Rab5 homolog Vps21 and is involved in endo-lysosomal biogenesis
-
doi: 10.1016/j.devcel.2007.03.006
-
Peplowska K, Markgraf DF, Ostrowicz CW, Bange G, Ungermann C, (2007) The CORVET tethering complex interacts with the yeast Rab5 homolog Vps21 and is involved in endo-lysosomal biogenesis. Dev Cell 12: 739-750. doi:10.1016/j.devcel.2007.03.006. PubMed: 17488625.
-
(2007)
Dev Cell
, vol.12
, pp. 739-750
-
-
Peplowska, K.1
Markgraf, D.F.2
Ostrowicz, C.W.3
Bange, G.4
Ungermann, C.5
-
70
-
-
79954590449
-
Subunit organization and Rab interactions of Vps-C protein complexes that control endolysosomal membrane traffic
-
doi: 10.1091/mbc.E10-03-0260
-
Plemel RL, Lobingier BT, Brett CL, Angers CG, Nickerson DP, et al. (2011) Subunit organization and Rab interactions of Vps-C protein complexes that control endolysosomal membrane traffic. Mol Cell Biol 22: 1353-1363. doi:10.1091/mbc.E10-03-0260. PubMed: 21325627.
-
(2011)
Mol Cell Biol
, vol.22
, pp. 1353-1363
-
-
Plemel, R.L.1
Lobingier, B.T.2
Brett, C.L.3
Angers, C.G.4
Nickerson, D.P.5
-
71
-
-
84877886601
-
CORVET and HOPS tethering complexes - coordinators of endosome and lysosome fusion
-
doi: 10.1242/jcs.107805
-
Balderhaar HJ, Ungermann C, (2013) CORVET and HOPS tethering complexes- coordinators of endosome and lysosome fusion. J Cell Sci 126: 1307-1316. doi:10.1242/jcs.107805. PubMed: 23645161.
-
(2013)
J Cell Sci
, vol.126
, pp. 1307-1316
-
-
Balderhaar, H.J.1
Ungermann, C.2
-
72
-
-
77958033412
-
Ang2/fat-free is a conserved subunit of the Golgi-associated retrograde protein complex
-
doi: 10.1091/mbc.E10-05-0392
-
Pérez-Victoria FJ, Schindler C, Magadán JG, Mardones GA, Delevoye C, et al. (2010) Ang2/fat-free is a conserved subunit of the Golgi-associated retrograde protein complex. Mol Cell Biol 21: 3386-3395. doi:10.1091/mbc.E10-05-0392. PubMed: 20685960.
-
(2010)
Mol Cell Biol
, vol.21
, pp. 3386-3395
-
-
Pérez-Victoria, F.J.1
Schindler, C.2
Magadán, J.G.3
Mardones, G.A.4
Delevoye, C.5
-
73
-
-
70349319578
-
Dual roles of the mammalian GARP complex in tethering and SNARE complex assembly at the trans-golgi network
-
doi: 10.1128/MCB.00495-09
-
Pérez-Victoria FJ, Bonifacino JS, (2009) Dual roles of the mammalian GARP complex in tethering and SNARE complex assembly at the trans-golgi network. Mol Cell Biol 29: 5251-5263. doi:10.1128/MCB.00495-09. PubMed: 19620288.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 5251-5263
-
-
Pérez-Victoria, F.J.1
Bonifacino, J.S.2
-
74
-
-
48749111661
-
Requirement of the human GARP complex for mannose 6-phosphate-receptor-dependent sorting of cathepsin D to lysosomes
-
doi: 10.1091/mbc.E07-11-1189
-
Pérez-Victoria FJ, Mardones GA, Bonifacino JS, (2008) Requirement of the human GARP complex for mannose 6-phosphate-receptor-dependent sorting of cathepsin D to lysosomes. Mol Cell Biol 19: 2350-2362. doi:10.1091/mbc.E07-11-1189. PubMed: 18367545.
-
(2008)
Mol Cell Biol
, vol.19
, pp. 2350-2362
-
-
Pérez-Victoria, F.J.1
Mardones, G.A.2
Bonifacino, J.S.3
-
75
-
-
0030898133
-
Sec3p is involved in secretion and morphogenesis in Saccharomyces cerevisiae
-
doi: 10.1091/mbc.8.4.647
-
Finger FP, Novick P, (1997) Sec3p is involved in secretion and morphogenesis in Saccharomyces cerevisiae. Mol Cell Biol 8: 647-662. doi:10.1091/mbc.8.4.647. PubMed: 9247645.
-
(1997)
Mol Cell Biol
, vol.8
, pp. 647-662
-
-
Finger, F.P.1
Novick, P.2
-
76
-
-
83455229807
-
Myosin V transports secretory vesicles via a Rab GTPase cascade and interaction with the exocyst complex
-
doi: 10.1016/j.devcel.2011.10.009
-
Jin Y, Sultana A, Gandhi P, Franklin E, Hamamoto S, et al. (2011) Myosin V transports secretory vesicles via a Rab GTPase cascade and interaction with the exocyst complex. Dev Cell 21: 1156-1170. doi:10.1016/j.devcel.2011.10.009. PubMed: 22172676.
-
(2011)
Dev Cell
, vol.21
, pp. 1156-1170
-
-
Jin, Y.1
Sultana, A.2
Gandhi, P.3
Franklin, E.4
Hamamoto, S.5
-
77
-
-
84862647762
-
The exocyst complex in exocytosis and cell migration
-
doi: 10.1007/s00709-011-0330-1
-
Liu J, Guo W, (2012) The exocyst complex in exocytosis and cell migration. Protoplasma 249: 587-597. doi:10.1007/s00709-011-0330-1. PubMed: 21997494.
-
(2012)
Protoplasma
, vol.249
, pp. 587-597
-
-
Liu, J.1
Guo, W.2
-
78
-
-
4143050430
-
The mammalian exocyst, a complex required for exocytosis, inhibits tubulin polymerization
-
doi: 10.1074/jbc.M313778200
-
Wang S, Liu Y, Adamson CL, Valdez G, Guo W, et al. (2004) The mammalian exocyst, a complex required for exocytosis, inhibits tubulin polymerization. J Biol Chem 279: 35958-35966. doi:10.1074/jbc.M313778200. PubMed: 15205466.
-
(2004)
J Biol Chem
, vol.279
, pp. 35958-35966
-
-
Wang, S.1
Liu, Y.2
Adamson, C.L.3
Valdez, G.4
Guo, W.5
-
79
-
-
0032080081
-
TRAPP, a highly conserved novel complex on the cis-Golgi that mediates vesicle docking and fusion
-
doi: 10.1093/emboj/17.9.2494
-
Sacher M, Jiang Y, Barrowman J, Scarpa A, Burston J, et al. (1998) TRAPP, a highly conserved novel complex on the cis-Golgi that mediates vesicle docking and fusion. EMBO J 17: 2494-2503. doi:10.1093/emboj/17.9.2494. PubMed: 9564032.
-
(1998)
EMBO J
, vol.17
, pp. 2494-2503
-
-
Sacher, M.1
Jiang, Y.2
Barrowman, J.3
Scarpa, A.4
Burston, J.5
-
80
-
-
77952329475
-
Trs85 directs a Ypt1 GEF, TRAPPIII, to the phagophore to promote autophagy
-
doi: 10.1073/pnas.1000063107
-
Lynch-Day MA, Bhandari D, Menon S, Huang J, Cai H, et al. (2010) Trs85 directs a Ypt1 GEF, TRAPPIII, to the phagophore to promote autophagy. Proc Natl Acad Sci U S A 107: 7811-7816. doi:10.1073/pnas.1000063107. PubMed: 20375281.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 7811-7816
-
-
Lynch-Day, M.A.1
Bhandari, D.2
Menon, S.3
Huang, J.4
Cai, H.5
-
81
-
-
45449083834
-
The structural basis for activation of the Rab Ypt1p by the TRAPP membrane-tethering complexes
-
doi: 10.1016/j.cell.2008.04.049
-
Cai Y, Chin HF, Lazarova D, Menon S, Fu C, et al. (2008) The structural basis for activation of the Rab Ypt1p by the TRAPP membrane-tethering complexes. Cell 133: 1202-1213. doi:10.1016/j.cell.2008.04.049. PubMed: 18585354.
-
(2008)
Cell
, vol.133
, pp. 1202-1213
-
-
Cai, Y.1
Chin, H.F.2
Lazarova, D.3
Menon, S.4
Fu, C.5
-
82
-
-
33847211759
-
TRAPPI tethers COPII vesicles by binding the coat subunit Sec23
-
doi: 10.1038/nature05527
-
Cai H, Yu S, Menon S, Cai Y, Lazarova D, et al. (2007) TRAPPI tethers COPII vesicles by binding the coat subunit Sec23. Nature 445: 941-944. doi:10.1038/nature05527. PubMed: 17287728.
-
(2007)
Nature
, vol.445
, pp. 941-944
-
-
Cai, H.1
Yu, S.2
Menon, S.3
Cai, Y.4
Lazarova, D.5
-
83
-
-
28544431984
-
Mutants in trs120 disrupt traffic from the early endosome to the late Golgi
-
doi: 10.1083/jcb.200505145
-
Cai H, Zhang Y, Pypaert M, Walker L, Ferro-Novick S, (2005) Mutants in trs120 disrupt traffic from the early endosome to the late Golgi. J Cell Biol 171: 823-833. doi:10.1083/jcb.200505145. PubMed: 16314430.
-
(2005)
J Cell Biol
, vol.171
, pp. 823-833
-
-
Cai, H.1
Zhang, Y.2
Pypaert, M.3
Walker, L.4
Ferro-Novick, S.5
-
84
-
-
70350115572
-
mTrs130 is a component of a mammalian TRAPPII complex, a Rab1 GEF that binds to COPI-coated vesicles
-
doi: 10.1091/mbc.E09-05-0387
-
Yamasaki A, Menon S, Yu S, Barrowman J, Meerloo T, et al. (2009) mTrs130 is a component of a mammalian TRAPPII complex, a Rab1 GEF that binds to COPI-coated vesicles. Mol Cell Biol 20: 4205-4215. doi:10.1091/mbc.E09-05-0387.
-
(2009)
Mol Cell Biol
, vol.20
, pp. 4205-4215
-
-
Yamasaki, A.1
Menon, S.2
Yu, S.3
Barrowman, J.4
Meerloo, T.5
-
85
-
-
84869087678
-
A trapper keeper for TRAPP, its structures and functions
-
Yu S, Liang Y, (2012) A trapper keeper for TRAPP, its structures and functions. Cell Mol Life Sci.
-
(2012)
Cell Mol Life Sci
-
-
Yu, S.1
Liang, Y.2
-
86
-
-
84855964001
-
TRAPPC9 mediates the interaction between p150 and COPII vesicles at the target membrane
-
doi: 10.1371/journal.pone.0029995
-
Zong M, Satoh A, Yu MK, Siu KY, Ng WY, et al. (2012) TRAPPC9 mediates the interaction between p150 and COPII vesicles at the target membrane. PLOS ONE 7: e29995. doi:10.1371/journal.pone.0029995. PubMed: 22279557.
-
(2012)
PLOS ONE
, vol.7
-
-
Zong, M.1
Satoh, A.2
Yu, M.K.3
Siu, K.Y.4
Ng, W.Y.5
-
87
-
-
34249730324
-
A new inborn error of glycosylation due to a Cog8 deficiency reveals a critical role for the Cog1-Cog8 interaction in COG complex formation
-
doi: 10.1093/hmg/ddl476
-
Foulquier F, Ungar D, Reynders E, Zeevaert R, Mills P, et al. (2007) A new inborn error of glycosylation due to a Cog8 deficiency reveals a critical role for the Cog1-Cog8 interaction in COG complex formation. Hum Mol Genet 16: 717-730. doi:10.1093/hmg/ddl476. PubMed: 17220172.
-
(2007)
Hum Mol Genet
, vol.16
, pp. 717-730
-
-
Foulquier, F.1
Ungar, D.2
Reynders, E.3
Zeevaert, R.4
Mills, P.5
-
88
-
-
78549285917
-
Molecular organization of the COG vesicle tethering complex
-
doi: 10.1038/nsmb.1917
-
Lees JA, Yip CK, Walz T, Hughson FM, (2010) Molecular organization of the COG vesicle tethering complex. Nat Struct Mol Biol 17: 1292-1297. doi:10.1038/nsmb.1917. PubMed: 20972446.
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 1292-1297
-
-
Lees, J.A.1
Yip, C.K.2
Walz, T.3
Hughson, F.M.4
-
89
-
-
78149340673
-
Phosphorylation of a membrane curvature-sensing motif switches function of the HOPS subunit Vps41 in membrane tethering
-
Cabrera M, Langemeyer L, Mari M, Rethmeier R, Orban I, et al. (2011) Phosphorylation of a membrane curvature-sensing motif switches function of the HOPS subunit Vps41 in membrane tethering. J Cell Biol 191: 845-859.
-
(2011)
J Cell Biol
, vol.191
, pp. 845-859
-
-
Cabrera, M.1
Langemeyer, L.2
Mari, M.3
Rethmeier, R.4
Orban, I.5
-
90
-
-
0033672239
-
Human Zw10 and ROD are mitotic checkpoint proteins that bind to kinetochores
-
doi: 10.1038/35046598
-
Chan GK, Jablonski SA, Starr DA, Goldberg ML, Yen TJ, (2000) Human Zw10 and ROD are mitotic checkpoint proteins that bind to kinetochores. Nat Cell Biol 2: 944-947. doi:10.1038/35046598. PubMed: 11146660.
-
(2000)
Nat Cell Biol
, vol.2
, pp. 944-947
-
-
Chan, G.K.1
Jablonski, S.A.2
Starr, D.A.3
Goldberg, M.L.4
Yen, T.J.5
-
91
-
-
39049107627
-
Stable hZW10 kinetochore residency, mediated by hZwint-1 interaction, is essential for the mitotic checkpoint
-
doi: 10.1083/jcb.200708021
-
Famulski JK, Vos L, Sun X, Chan G, (2008) Stable hZW10 kinetochore residency, mediated by hZwint-1 interaction, is essential for the mitotic checkpoint. J Cell Biol 180: 507-520. doi:10.1083/jcb.200708021. PubMed: 18268100.
-
(2008)
J Cell Biol
, vol.180
, pp. 507-520
-
-
Famulski, J.K.1
Vos, L.2
Sun, X.3
Chan, G.4
-
92
-
-
21744436611
-
Rod-Zw10-Zwilch: a key player in the spindle checkpoint
-
doi: 10.1016/j.tcb.2005.05.003
-
Karess R, (2005) Rod-Zw10-Zwilch: a key player in the spindle checkpoint. Trends Cell Biol 15: 386-392. doi:10.1016/j.tcb.2005.05.003. PubMed: 15922598.
-
(2005)
Trends Cell Biol
, vol.15
, pp. 386-392
-
-
Karess, R.1
-
93
-
-
0037694976
-
Zwilch, a new component of the ZW10/ROD complex required for kinetochore functions
-
doi: 10.1091/mbc.E02-09-0624
-
Williams BC, Li Z, Liu S, Williams EV, Leung G, et al. (2003) Zwilch, a new component of the ZW10/ROD complex required for kinetochore functions. Mol Cell Biol 14: 1379-1391. doi:10.1091/mbc.E02-09-0624. PubMed: 12686595.
-
(2003)
Mol Cell Biol
, vol.14
, pp. 1379-1391
-
-
Williams, B.C.1
Li, Z.2
Liu, S.3
Williams, E.V.4
Leung, G.5
-
94
-
-
84862241805
-
The DSL1 Complex: The Smallest but Not the Least CATCHR
-
doi: 10.1111/j.1600-0854.2012.01362.x
-
Spang A, (2012) The DSL1 Complex: The Smallest but Not the Least CATCHR. Traffic 13: 908-913. doi:10.1111/j.1600-0854.2012.01362.x. PubMed: 22486903.
-
(2012)
Traffic
, vol.13
, pp. 908-913
-
-
Spang, A.1
-
95
-
-
33644907201
-
The evolutionary origin of peroxisomes: an ER-peroxisome connection
-
doi: 10.1093/molbev/msj103
-
Schlüter A, Fourcade S, Ripp R, Mandel JL, Poch O, et al. (2006) The evolutionary origin of peroxisomes: an ER-peroxisome connection. Mol Biol Evol 23: 838-845. doi:10.1093/molbev/msj103. PubMed: 16452116.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 838-845
-
-
Schlüter, A.1
Fourcade, S.2
Ripp, R.3
Mandel, J.L.4
Poch, O.5
-
96
-
-
80053054984
-
A single peroxisomal targeting signal mediates matrix protein import in diatoms
-
doi: 10.1371/journal.pone.0025316
-
Gonzalez NH, Felsner G, Schramm FD, Klingl A, Maier UG, et al. (2011) A single peroxisomal targeting signal mediates matrix protein import in diatoms. PLOS ONE 6: e25316. doi:10.1371/journal.pone.0025316. PubMed: 21966495.
-
(2011)
PLOS ONE
, vol.6
-
-
Gonzalez, N.H.1
Felsner, G.2
Schramm, F.D.3
Klingl, A.4
Maier, U.G.5
-
97
-
-
34447100360
-
Adhesion molecules and other secreted host-interaction determinants in Apicomplexa: insights from comparative genomics
-
doi: 10.1016/S0074-7696(07)62001-4
-
Anantharaman V, Iyer LM, Balaji S, Aravind L, (2007) Adhesion molecules and other secreted host-interaction determinants in Apicomplexa: insights from comparative genomics. Int Rev Cytol 262: 1-74. doi:10.1016/S0074-7696(07)62001-4. PubMed: 17631186.
-
(2007)
Int Rev Cytol
, vol.262
, pp. 1-74
-
-
Anantharaman, V.1
Iyer, L.M.2
Balaji, S.3
Aravind, L.4
-
98
-
-
43849090668
-
Proteomics and glycomics analyses of N-glycosylated structures involved in Toxoplasma gondii--host cell interactions
-
doi: 10.1074/mcp.M700391-MCP200
-
Fauquenoy S, Morelle W, Hovasse A, Bednarczyk A, Slomianny C, et al. (2008) Proteomics and glycomics analyses of N-glycosylated structures involved in Toxoplasma gondii--host cell interactions. Mol Cell Proteomics 7: 891-910. doi:10.1074/mcp.M700391-MCP200. PubMed: 18187410.
-
(2008)
Mol Cell Proteomics
, vol.7
, pp. 891-910
-
-
Fauquenoy, S.1
Morelle, W.2
Hovasse, A.3
Bednarczyk, A.4
Slomianny, C.5
-
99
-
-
4644353894
-
Comparative analysis of apicomplexa and genomic diversity in eukaryotes
-
doi: 10.1101/gr.2615304
-
Templeton TJ, Iyer LM, Anantharaman V, Enomoto S, Abrahante JE, et al. (2004) Comparative analysis of apicomplexa and genomic diversity in eukaryotes. Genome Res 14: 1686-1695. doi:10.1101/gr.2615304. PubMed: 15342554.
-
(2004)
Genome Res
, vol.14
, pp. 1686-1695
-
-
Templeton, T.J.1
Iyer, L.M.2
Anantharaman, V.3
Enomoto, S.4
Abrahante, J.E.5
-
100
-
-
84862259443
-
Re'COG'nition at the Golgi
-
doi: 10.1111/j.1600-0854.2012.01338.x
-
Miller VJ, Ungar D, (2012) Re'COG'nition at the Golgi. Traffic 13: 891-897. doi:10.1111/j.1600-0854.2012.01338.x. PubMed: 22300173.
-
(2012)
Traffic
, vol.13
, pp. 891-897
-
-
Miller, V.J.1
Ungar, D.2
-
101
-
-
67651166603
-
Direct interaction between the COG complex and the SM protein, Sly1, is required for Golgi SNARE pairing
-
doi: 10.1038/emboj.2009.168
-
Laufman O, Kedan A, Hong W, Lev S, (2009) Direct interaction between the COG complex and the SM protein, Sly1, is required for Golgi SNARE pairing. EMBO J 28: 2006-2017. doi:10.1038/emboj.2009.168. PubMed: 19536132.
-
(2009)
EMBO J
, vol.28
, pp. 2006-2017
-
-
Laufman, O.1
Kedan, A.2
Hong, W.3
Lev, S.4
-
102
-
-
37249008781
-
Interaction of the conserved oligomeric Golgi complex with t-SNARE Syntaxin5a/Sed5 enhances intra-Golgi SNARE complex stability
-
doi: 10.1083/jcb.200705145
-
Shestakova A, Suvorova E, Pavliv O, Khaidakova G, Lupashin V, (2007) Interaction of the conserved oligomeric Golgi complex with t-SNARE Syntaxin5a/Sed5 enhances intra-Golgi SNARE complex stability. J Cell Biol 179: 1179-1192. doi:10.1083/jcb.200705145. PubMed: 18086915.
-
(2007)
J Cell Biol
, vol.179
, pp. 1179-1192
-
-
Shestakova, A.1
Suvorova, E.2
Pavliv, O.3
Khaidakova, G.4
Lupashin, V.5
-
103
-
-
33847272246
-
Identification of Plasmodium falciparum family of SNAREs
-
doi: 10.1016/j.molbiopara.2006.12.007
-
Ayong L, Pagnotti G, Tobon AB, Chakrabarti D, (2007) Identification of Plasmodium falciparum family of SNAREs. Mol Biochem Parasitol 152: 113-122. doi:10.1016/j.molbiopara.2006.12.007. PubMed: 17240462.
-
(2007)
Mol Biochem Parasitol
, vol.152
, pp. 113-122
-
-
Ayong, L.1
Pagnotti, G.2
Tobon, A.B.3
Chakrabarti, D.4
-
104
-
-
84855884898
-
Regulation of exocytosis by the exocyst subunit Sec6 and the SM protein Sec1
-
doi: 10.1091/mbc.E11-08-0670
-
Morgera F, Sallah MR, Dubuke ML, Gandhi P, Brewer DN, et al. (2012) Regulation of exocytosis by the exocyst subunit Sec6 and the SM protein Sec1. Mol Cell Biol 23: 337-346. doi:10.1091/mbc.E11-08-0670.
-
(2012)
Mol Cell Biol
, vol.23
, pp. 337-346
-
-
Morgera, F.1
Sallah, M.R.2
Dubuke, M.L.3
Gandhi, P.4
Brewer, D.N.5
-
105
-
-
17644416413
-
Dimerization of the exocyst protein Sec6p and its interaction with the t-SNARE Sec9p
-
doi: 10.1021/bi048008z
-
Sivaram MV, Saporita JA, Furgason ML, Boettcher AJ, Munson M, (2005) Dimerization of the exocyst protein Sec6p and its interaction with the t-SNARE Sec9p. Biochemistry 44: 6302-6311. doi:10.1021/bi048008z. PubMed: 15835919.
-
(2005)
Biochemistry
, vol.44
, pp. 6302-6311
-
-
Sivaram, M.V.1
Saporita, J.A.2
Furgason, M.L.3
Boettcher, A.J.4
Munson, M.5
-
106
-
-
84869886779
-
Evolution of apicomplexan secretory organelles
-
doi: 10.1016/j.ijpara.2012.09.009
-
Gubbels MJ, Duraisingh MT, (2012) Evolution of apicomplexan secretory organelles. Int J Parasitol 42: 1071-1081. doi:10.1016/j.ijpara.2012.09.009. PubMed: 23068912.
-
(2012)
Int J Parasitol
, vol.42
, pp. 1071-1081
-
-
Gubbels, M.J.1
Duraisingh, M.T.2
-
107
-
-
84882928134
-
Cryptic organelle homology in apicomplexan parasites: insights from evolutionary cell biology
-
PubMed: 23932202
-
Klinger CM, Nisbet RE, Ouologuem DT, Roos DS, Dacks JB, (2013) Cryptic organelle homology in apicomplexan parasites: insights from evolutionary cell biology. Curr Opin Microbiol, 16: 424-31. PubMed: 23932202.
-
(2013)
Curr Opin Microbiol
, vol.16
, pp. 424-431
-
-
Klinger, C.M.1
Nisbet, R.E.2
Ouologuem, D.T.3
Roos, D.S.4
Dacks, J.B.5
-
108
-
-
84874677712
-
Proteomic analysis of clathrin interactions in trypanosomes reveals dynamic evolution of endocytosis
-
doi: 10.1111/tra.12040
-
Adung'a VO, Gadelha C, Field MC, (2013) Proteomic analysis of clathrin interactions in trypanosomes reveals dynamic evolution of endocytosis. Traffic 14: 440-457. doi:10.1111/tra.12040. PubMed: 23305527.
-
(2013)
Traffic
, vol.14
, pp. 440-457
-
-
Adung'a, V.O.1
Gadelha, C.2
Field, M.C.3
-
109
-
-
84869174792
-
Alveolate mitochondrial metabolic evolution: dinoflagellates force reassessment of the role of parasitism as a driver of change in apicomplexans
-
PubMed: 22923466
-
Danne JC, Gornik SG, Macrae JI, McConville MJ, Waller RF, (2012) Alveolate mitochondrial metabolic evolution: dinoflagellates force reassessment of the role of parasitism as a driver of change in apicomplexans. Mol Biol Evol 30: 123-139. PubMed: 22923466.
-
(2012)
Mol Biol Evol
, vol.30
, pp. 123-139
-
-
Danne, J.C.1
Gornik, S.G.2
Macrae, J.I.3
McConville, M.J.4
Waller, R.F.5
-
110
-
-
84862490662
-
Description of two species of early branching dinoflagellates, Psammosa pacifica n. g., n. sp. and P. atlantica n. sp
-
Okamoto N, Horak A, Keeling PJ, (2012) Description of two species of early branching dinoflagellates, Psammosa pacifica n. g., n. sp. and P. atlantica n. sp. PLOS One 7: e34900.
-
(2012)
PLOS One
, vol.7
-
-
Okamoto, N.1
Horak, A.2
Keeling, P.J.3
-
111
-
-
78650415537
-
Morphology and ultrastructure of multiple life cycle stages of the photosynthetic relative of Apicomplexa, Chromera velia
-
doi: 10.1016/j.protis.2010.02.004
-
Oborník M, Vancová M, Lai DH, Janouškovec J, Keeling PJ, et al. (2011) Morphology and ultrastructure of multiple life cycle stages of the photosynthetic relative of Apicomplexa, Chromera velia. Protist 162: 115-130. doi:10.1016/j.protis.2010.02.004. PubMed: 20643580.
-
(2011)
Protist
, vol.162
, pp. 115-130
-
-
Oborník, M.1
Vancová, M.2
Lai, D.H.3
Janouškovec, J.4
Keeling, P.J.5
-
112
-
-
84856233652
-
Morphology, ultrastructure and life cycle of Vitrella brassicaformis n. sp., n. gen., a novel chromerid from the Great Barrier Reef
-
doi: 10.1016/j.protis.2011.09.001
-
Oborník M, Modrý D, Lukeš M, Cernotíková-Stříbrná E, Cihlář J, et al. (2012) Morphology, ultrastructure and life cycle of Vitrella brassicaformis n. sp., n. gen., a novel chromerid from the Great Barrier Reef. Protist 163: 306-323. doi:10.1016/j.protis.2011.09.001. PubMed: 22055836.
-
(2012)
Protist
, vol.163
, pp. 306-323
-
-
Oborník, M.1
Modrý, D.2
Lukeš, M.3
Cernotíková-Stříbrná, E.4
Cihlář, J.5
-
113
-
-
84863681580
-
Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs
-
doi: 10.1016/j.cub.2012.04.047
-
Janouškovec J, Horák A, Barott KL, Rohwer FL, Keeling PJ, (2012) Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs. Curr Biol 22: R518-R519. doi:10.1016/j.cub.2012.04.047. PubMed: 22789997.
-
(2012)
Curr Biol
, vol.22
-
-
Janouškovec, J.1
Horák, A.2
Barott, K.L.3
Rohwer, F.L.4
Keeling, P.J.5
-
114
-
-
79959841030
-
Alveolate phylogeny inferred using concatenated ribosomal proteins
-
doi: 10.1111/j.1550-7408.2011.00555.x
-
Bachvaroff TR, Handy SM, Place AR, Delwiche CF, (2011) Alveolate phylogeny inferred using concatenated ribosomal proteins. J Eukaryot Microbiol 58: 223-233. doi:10.1111/j.1550-7408.2011.00555.x. PubMed: 21518081.
-
(2011)
J Eukaryot Microbiol
, vol.58
, pp. 223-233
-
-
Bachvaroff, T.R.1
Handy, S.M.2
Place, A.R.3
Delwiche, C.F.4
|